Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 3.0e-105 385.2 192 100.0
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 3.9e-81 305.1 167 90.4
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 8.7e-81 303.9 166 89.2
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 8.7e-81 303.9 166 89.2
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.1e-80 303.5 172 88.4
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.1e-80 303.5 172 88.4
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.1e-80 303.5 172 88.4
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 1.5e-80 303.1 172 86.6
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 1.5e-80 303.1 172 86.6
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 1.5e-80 303.1 168 91.7
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 4.8e-79 298.1 168 89.3
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 1.6e-74 283.1 163 85.3
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 3.5e-74 282.0 140 94.3
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 9.6e-72 273.9 165 80.6
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 2.1e-71 272.7 146 87.0
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 4.8e-71 271.6 167 77.8
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 6.2e-71 271.2 165 80.6
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 6.2e-71 271.2 158 83.5
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.4e-70 270.0 171 77.2
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 3.1e-70 268.9 172 76.7
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 3.1e-70 268.9 172 80.8
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 3.1e-70 268.9 145 89.0
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 4.0e-70 268.5 144 87.5
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 4.0e-70 268.5 145 87.6
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 4.0e-70 268.5 162 80.2
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 6.9e-70 267.7 141 88.7
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 9.0e-70 267.3 175 76.0
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 9.0e-70 267.3 154 83.1
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 9.0e-70 267.3 140 89.3
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 9.0e-70 267.3 145 85.5
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 1.2e-69 266.9 165 80.0
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.2e-69 266.9 147 85.7
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.0e-69 266.2 160 80.6
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.6e-69 265.8 149 83.2
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.6e-69 265.8 149 83.2
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 2.6e-69 265.8 165 78.2
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 2.6e-69 265.8 140 87.1
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 3.4e-69 265.4 165 78.2
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 4.5e-69 265.0 173 75.1
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 4.5e-69 265.0 150 83.3
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 5.8e-69 264.6 165 78.8
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 5.8e-69 264.6 165 78.8
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 5.8e-69 264.6 165 78.8
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 5.8e-69 264.6 144 84.7
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 5.8e-69 264.6 174 74.7
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 7.6e-69 264.2 140 87.1
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 7.6e-69 264.2 140 87.1
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 7.6e-69 264.2 140 87.1
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 7.6e-69 264.2 159 79.2
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 1.0e-68 263.8 158 79.1
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.0e-68 263.8 159 79.9
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.3e-68 263.5 158 81.6
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 2.2e-68 262.7 147 83.0
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 2.2e-68 262.7 158 81.0
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.9e-68 262.3 165 78.2
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.9e-68 262.3 165 78.2
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 2.9e-68 262.3 150 83.3
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.8e-68 261.9 172 76.2
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 4.9e-68 261.5 149 80.5
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.5e-68 261.2 165 78.2
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 6.5e-68 261.2 168 75.6
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 8.4e-68 260.8 158 79.7
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.1e-67 260.4 161 79.5
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 1.4e-67 260.0 138 87.0
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 1.4e-67 260.0 162 77.8
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 1.9e-67 259.6 162 78.4
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.9e-67 259.6 163 76.7
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 2.5e-67 259.2 158 81.6
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 2.5e-67 259.2 149 79.2
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 2.5e-67 259.2 140 86.4
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 2.5e-67 259.2 139 84.2
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 3.2e-67 258.8 158 76.6
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 3.2e-67 258.8 145 82.1
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 5.5e-67 258.1 140 85.0
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 1.2e-66 256.9 159 75.5
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 1.6e-66 256.5 159 75.5
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 2.1e-66 256.1 157 79.6
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 6.0e-66 254.6 162 76.5
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 6.0e-66 254.6 145 80.7
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 7.9e-66 254.2 159 78.0
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.0e-65 253.8 139 83.5
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.3e-65 253.4 156 75.6
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.8e-65 253.1 139 83.5
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.8e-65 253.1 143 81.1
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 5.1e-65 251.5 142 81.0
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 5.1e-65 251.5 147 79.6
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.5e-64 250.0 155 77.4
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 3.3e-64 248.8 174 71.3
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 4.3e-64 248.4 162 72.8
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 2.2e-63 246.1 179 69.8
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 2.8e-63 245.7 138 80.4
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 4.8e-63 245.0 129 86.8
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 3.1e-62 242.3 161 76.4
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 4.1e-62 241.9 129 85.3
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 5.3e-62 241.5 154 74.0
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 6.9e-62 241.1 208 61.5
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 9.0e-62 240.7 146 77.4
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.0e-60 237.3 157 71.3
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 3.8e-60 235.3 154 72.1
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.7e-58 229.2 181 65.2
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.3e-55 220.3 170 64.1
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 8.8e-49 197.6 159 62.9
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 9.1e-46 187.6 139 61.2
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.9e-45 184.9 95 90.5
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 5.9e-45 184.9 181 56.9
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.1e-43 180.6 94 88.3
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.1e-42 176.4 94 86.2
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 5.2e-41 171.8 89 87.6
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 1.7e-36 156.8 142 52.1
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.2e-35 152.1 110 70.0
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.2e-28 129.8 158 41.1
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.3e-25 119.8 139 46.8
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 6.8e-25 118.2 60 90.0
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.2e-24 117.5 169 46.7
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 4.5e-21 105.5 161 37.9
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.5e-19 100.5 129 45.0
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.3e-15 87.4 70 61.4
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 6.3e-15 85.1 57 68.4
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.7e-13 79.7 43 76.7
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 2.3e-09 66.6 82 47.6


User provided reference genes

Program Settings