Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 6.5e-134 480.7 242 100.0
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 4.1e-120 434.9 242 88.0
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 7.8e-119 430.6 242 87.2
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.3e-118 429.9 242 86.8
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.7e-118 429.5 242 88.4
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 5.6e-117 424.5 242 88.8
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 5.2e-115 417.9 242 86.0
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 5.2e-115 417.9 242 86.8
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 5.2e-115 417.9 242 86.8
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.5e-114 416.4 242 85.1
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.5e-114 416.4 242 85.1
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 2.0e-114 416.0 242 86.4
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 6.4e-113 411.0 242 85.5
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 1.6e-111 406.4 242 85.1
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 1.7e-110 402.9 242 84.7
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 1.1e-107 393.7 242 80.2
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 2.2e-105 386.0 241 79.7
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 3.2e-104 382.1 239 78.2
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 5.4e-104 381.3 239 78.2
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 2.1e-103 379.4 239 78.2
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 4.6e-103 378.3 239 76.2
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 1.3e-102 376.7 239 77.4
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 1.7e-102 376.3 239 76.6
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 2.3e-102 375.9 239 77.8
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 3.9e-102 375.2 239 76.2
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 6.6e-102 374.4 239 76.2
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 8.6e-102 374.0 239 77.0
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 1.1e-101 373.6 238 75.6
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 1.1e-101 373.6 239 76.6
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 1.1e-101 373.6 233 78.5
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 2.5e-101 372.5 239 76.6
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 3.3e-101 372.1 239 74.9
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 5.6e-101 371.3 239 76.6
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 1.2e-100 370.2 239 75.3
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 1.2e-100 370.2 239 74.5
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 1.6e-100 369.8 235 75.7
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 2.8e-100 369.0 239 74.9
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 3.6e-100 368.6 239 74.9
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 1.1e-99 367.1 239 76.2
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 1.4e-99 366.7 239 74.5
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 1.8e-99 366.3 272 70.6
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 1.8e-99 366.3 233 76.8
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 3.1e-99 365.5 239 75.3
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 3.1e-99 365.5 239 74.1
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 4.0e-99 365.2 239 74.1
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 4.0e-99 365.2 239 74.9
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 5.2e-99 364.8 239 73.2
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 6.8e-99 364.4 239 75.3
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 1.2e-98 363.6 239 72.4
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 1.5e-98 363.2 239 73.2
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 2.0e-98 362.8 232 75.0
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 2.0e-98 362.8 239 76.2
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 5.8e-98 361.3 232 76.3
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 9.9e-98 360.5 235 75.3
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 1.3e-97 360.1 234 73.9
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 1.7e-97 359.8 239 74.1
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 2.2e-97 359.4 239 74.5
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 2.9e-97 359.0 239 73.6
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 2.9e-97 359.0 234 75.2
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 3.7e-97 358.6 239 71.5
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 3.7e-97 358.6 239 73.6
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 3.7e-97 358.6 234 76.1
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 4.9e-97 358.2 235 73.6
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 4.9e-97 358.2 234 76.1
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 4.9e-97 358.2 234 75.2
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 1.1e-96 357.1 193 90.7
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 1.1e-96 357.1 240 72.5
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 1.1e-96 357.1 236 74.2
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.4e-96 356.7 234 75.2
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 1.4e-96 356.7 236 74.2
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 1.9e-96 356.3 220 78.2
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 2.4e-96 355.9 239 72.4
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 9.2e-96 354.0 239 72.4
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 2.7e-95 352.4 264 67.0
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 4.6e-95 351.7 226 74.3
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 4.6e-95 351.7 229 71.6
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 7.8e-95 350.9 240 69.6
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 1.0e-94 350.5 211 82.0
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 2.3e-94 349.4 258 67.4
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 1.1e-93 347.1 232 72.4
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.5e-93 346.7 240 69.2
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.9e-93 346.3 239 71.5
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 1.9e-93 346.3 232 70.7
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 1.9e-93 346.3 229 70.3
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 4.3e-93 345.1 211 80.6
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 5.6e-93 344.7 232 71.6
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 5.6e-93 344.7 339 55.5
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 9.6e-93 344.0 239 71.5
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 1.2e-92 343.6 234 71.4
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 1.1e-91 340.5 242 74.0
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 8.9e-91 337.4 231 67.5
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 9.9e-90 334.0 233 70.4
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 3.8e-89 332.0 289 60.6
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 3.8e-89 332.0 239 68.6
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 6.4e-89 331.3 235 68.1
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 1.1e-88 330.5 239 69.0
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 9.3e-88 327.4 213 76.1
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 9.3e-88 327.4 202 78.7
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 1.6e-87 326.6 202 79.2
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 2.1e-87 326.2 285 59.6
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 7.8e-87 324.3 196 80.1
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 2.5e-85 319.3 236 66.5
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 4.8e-84 315.1 201 76.1
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 9.0e-83 310.8 241 66.4
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 1.7e-81 306.6 197 73.1
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 2.4e-80 302.8 233 67.8
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 1.6e-79 300.1 207 70.5
THA.LOC104801749 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.0e-78 297.4 167 85.6
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 3.5e-71 272.3 152 87.5
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 2.3e-70 269.6 227 58.6
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 6.7e-70 268.1 176 72.7
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 1.3e-68 263.8 235 54.5
CsaV3_1G001530 Cucumis sativus L. HOM05D004647 ORTHO05D005349 1.1e-67 260.8 171 74.3
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 2.9e-65 252.7 222 55.0
Nn3g16872 Nelumbo nucifera HOM05D004647 ORTHO05D005349 5.8e-58 228.4 135 81.5
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 7.4e-53 211.5 139 71.9
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 7.4e-53 211.5 139 71.9
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 1.5e-50 203.8 192 51.0
MELO3C026290.2 Cucumis melo HOM05D004647 ORTHO05D005349 5.9e-50 201.8 133 73.7
Zm00001eb359590 Zea mays HOM05D004647 ORTHO05D005349 8.5e-49 198.0 131 71.8
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.9e-48 196.8 125 75.2
QL02p101061 Quercus lobata HOM05D004647 ORTHO05D005349 1.6e-47 193.7 119 79.8
QL02p101105 Quercus lobata HOM05D004647 ORTHO05D005349 1.6e-47 193.7 119 79.8
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 4.6e-47 192.2 119 78.2
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 7.9e-47 191.4 182 56.0
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 1.0e-46 191.0 227 42.3
VMungo1215G1703 Vigna mungo HOM05D004647 ORTHO05D005349 1.0e-46 191.0 125 72.0
PSO384G3338 Papaver somniferum HOM05D004647 ORTHO05D005349 4.3e-45 185.7 168 58.9
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 5.9e-42 175.3 227 44.1
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 3.8e-41 172.6 118 68.6
Ca_07701_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.6e-37 159.8 127 66.1
Glyma.19G045000 Glycine max HOM05D004647 ORTHO05D005349 4.1e-35 152.5 119 64.7
CAN.G110.1 Capsicum annuum HOM05D004647 ORTHO05D005349 1.9e-32 143.7 132 56.8
PRCOL_00002933 Prasinoderma coloniale HOM05D004647 ORTHO05D005349 4.0e-30 136.0 183 44.3
SEGI_00924 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 4.0e-30 136.0 99 66.7
Oeu005668.1 Olea europaea HOM05D004647 ORTHO05D005349 7.5e-29 131.7 85 69.4
CSS0039197 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 9.7e-29 131.3 111 62.2
SEGI_26695 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.7e-25 120.6 150 40.7
Cc00_g25260 Coffea canephora HOM05D004647 ORTHO05D005349 7.2e-24 115.2 81 70.4
Cc00_g18100 Coffea canephora HOM05D004647 ORTHO05D005349 4.7e-23 112.5 89 61.8
Ca_22423_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 8.0e-23 111.7 100 62.0
Ca_24957_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 1.0e-22 111.3 106 56.6
PGSC0003DMG400042364 Solanum tuberosum HOM05D004647 ORTHO05D005349 1.0e-22 111.3 80 63.8
Cfa024128 Carpinus fangiana HOM05D004647 ORTHO05D005349 1.8e-22 110.5 238 32.8
Potri.015G075400 Populus trichocarpa HOM05D004647 ORTHO05D005349 4.4e-21 105.9 70 74.3
MCO01G631 Micromonas commoda HOM05D004647 ORTHO05D005349 1.7e-17 94.0 183 30.1
Cc00_g33640 Coffea canephora HOM05D004647 ORTHO05D005349 2.7e-15 86.7 51 80.4
CSS0048825 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 2.3e-14 83.6 59 69.5
SEGI_09107 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 6.8e-14 82.0 62 64.5
MD14G1181100 Malus domestica HOM05D004647 ORTHO05D005349 4.9e-12 75.9 162 34.0
QL02p027014 Quercus lobata HOM05D004647 ORTHO05D005349 1.9e-08 63.9 39 76.9
QL02p024044 Quercus lobata HOM05D004647 ORTHO05D005349 2.3e-06 57.0 33 72.7
Actinidia19316 Actinidia chinensis HOM05D004647 ORTHO05D005349 6.8e-06 55.5 37 78.4


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