Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 1.3e-137 493.0 254 100.0
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.9e-99 366.3 257 73.5
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 7.2e-99 364.4 257 73.5
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 3.3e-96 355.5 256 73.4
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.2e-95 352.8 250 74.0
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 6.9e-94 347.8 256 72.7
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.0e-93 346.3 257 73.2
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.9e-93 344.7 260 71.5
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.0e-92 344.0 247 72.1
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 3.8e-92 342.0 255 72.2
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 6.5e-92 341.3 250 71.6
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 8.5e-92 340.9 250 71.6
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.9e-91 339.7 260 70.0
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.5e-91 338.2 257 70.4
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.0e-89 334.0 260 69.6
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.0e-89 334.0 260 69.6
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 2.3e-89 332.8 264 68.9
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.3e-89 332.8 250 69.2
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 3.3e-88 328.9 258 68.2
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.7e-87 326.6 255 67.8
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.7e-87 326.6 255 67.8
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.7e-87 326.6 241 69.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 3.7e-87 325.5 221 74.7
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 8.2e-87 324.3 258 67.4
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.1e-86 323.9 258 67.8
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.4e-86 323.6 263 65.4
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.1e-86 322.4 246 70.3
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 5.3e-86 321.6 255 67.5
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 7.0e-86 321.2 257 65.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.2e-85 320.5 246 67.1
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.6e-85 320.1 252 65.9
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.0e-85 319.7 259 64.1
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.7e-84 316.6 257 64.2
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 1.7e-84 316.6 229 70.7
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 2.9e-84 315.8 264 64.4
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.9e-84 315.8 237 67.9
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 5.0e-84 315.1 256 66.4
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 6.5e-84 314.7 253 64.8
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 6.5e-84 314.7 250 65.2
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 8.5e-84 314.3 260 65.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 8.5e-84 314.3 257 63.8
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.1e-83 313.9 281 62.3
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.9e-83 313.2 265 63.4
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 2.5e-83 312.8 256 66.0
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.5e-83 312.8 349 52.4
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.2e-83 312.4 235 68.1
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 5.5e-83 311.6 258 65.1
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 9.4e-83 310.8 258 65.1
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.2e-82 310.5 266 63.2
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.1e-82 309.7 257 65.0
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.6e-82 308.9 257 64.6
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 3.6e-82 308.9 254 64.2
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 8.0e-82 307.8 262 62.2
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 4.0e-81 305.4 253 63.2
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 4.0e-81 305.4 257 64.2
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 4.0e-81 305.4 256 62.9
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.5e-80 303.5 255 63.9
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.5e-80 303.5 262 61.5
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 2.0e-80 303.1 288 59.4
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.3e-79 300.4 248 66.1
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.7e-79 300.1 254 64.2
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.2e-79 299.7 251 63.3
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 2.2e-79 299.7 257 62.3
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 6.3e-79 298.1 307 55.7
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.4e-78 297.0 241 66.8
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.1e-78 295.8 237 66.7
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.1e-78 295.8 235 66.4
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 9.1e-78 294.3 253 61.3
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.6e-77 293.5 253 62.1
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.5e-77 292.4 276 58.0
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.2e-76 289.7 253 60.5
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 3.8e-76 288.9 262 58.8
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 5.5e-75 285.0 259 60.6
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.2e-74 283.9 249 59.8
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.6e-74 283.5 254 61.8
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 4.0e-73 278.9 255 59.6
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.2e-72 277.3 250 62.0
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 3.4e-72 275.8 267 56.9
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 4.4e-72 275.4 242 60.3
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.7e-71 273.5 255 57.6
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.1e-70 270.8 226 61.1
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.1e-70 270.8 259 56.4
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.4e-70 270.4 288 56.6
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 2.4e-70 269.6 253 56.5
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 5.4e-70 268.5 269 56.9
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.2e-69 267.3 256 57.8
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.0e-68 264.2 229 60.7
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 6.5e-68 261.5 242 57.4
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 8.5e-68 261.2 256 56.6
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 8.5e-68 261.2 256 56.6
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.2e-66 257.3 275 54.2
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 3.6e-66 255.8 248 56.9
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 4.7e-66 255.4 263 55.1
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.4e-65 253.8 175 67.4
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 3.4e-64 249.2 262 56.5
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.9e-59 233.4 216 60.2
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 4.0e-57 225.7 450 36.9
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 7.5e-56 221.5 260 53.1
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 3.0e-52 209.5 134 68.7
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 4.7e-50 202.2 257 49.8
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.3e-47 194.1 161 58.4
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 6.8e-41 171.8 233 40.8
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 7.1e-38 161.8 257 42.0
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.2e-34 151.0 158 59.5
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.4e-33 147.5 92 69.6
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.7e-31 140.6 222 37.4
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.1e-29 133.7 134 53.0
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 7.8e-29 131.7 98 61.2
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.1e-26 123.6 124 65.3
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 3.9e-20 102.8 208 31.2
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 7.3e-19 98.6 168 38.7
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.8e-18 96.7 235 31.1
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 6.9e-17 92.0 127 52.0
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 4.5e-16 89.4 131 44.3
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 5.8e-16 89.0 88 45.5
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 3.8e-15 86.3 119 48.7
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.1e-14 84.7 84 61.9
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 1.0e-12 78.2 52 59.6
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.8e-12 77.4 86 57.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 1.9e-11 73.9 86 53.5
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 5.3e-09 65.9 159 30.2
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.4e-06 57.8 155 27.1
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 3.2e-06 56.6 142 31.0


User provided reference genes

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