Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 2124.7 1063 100.0
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1629.8 1100 74.4
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1614.7 1093 74.5
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1612.4 1083 75.1
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1588.2 1078 74.1
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1585.5 1082 74.1
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1582.0 1087 72.9
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1558.9 1084 72.8
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 1548.1 1099 71.5
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1546.6 1130 69.2
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1542.3 1087 71.6
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1540.0 1089 71.7
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1536.9 1083 71.1
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1530.8 1087 70.9
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1528.5 1071 72.0
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1528.5 1086 70.0
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1521.5 1088 70.7
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1521.5 1089 70.8
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1518.4 1095 70.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1516.9 1113 69.7
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 1514.2 1087 69.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1513.0 1077 71.5
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1512.3 1095 69.5
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1510.4 1113 69.4
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1506.1 1089 69.7
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1496.5 1073 70.1
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1494.2 1087 69.7
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1489.9 1109 67.8
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 1482.6 1082 68.9
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1481.5 1065 70.4
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1474.5 987 74.6
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1469.9 1084 68.6
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1466.1 1082 67.7
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1463.7 1086 67.8
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1463.4 1098 68.6
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1461.8 1122 66.9
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1456.8 1185 65.4
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1455.7 1077 68.3
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1448.3 1049 68.8
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1446.0 1083 67.5
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1443.7 1080 67.5
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 1442.9 1082 67.4
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1442.2 1098 67.8
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1438.3 1121 65.1
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1437.2 1144 64.4
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 1434.1 1082 67.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 1429.8 1082 66.8
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1428.7 1082 67.5
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1425.2 1082 67.5
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1424.8 1089 66.7
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1424.5 1082 67.1
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1422.5 1091 66.5
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1418.7 1075 65.9
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1414.4 1015 69.3
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 1411.7 1082 66.3
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1411.4 1087 66.5
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1410.6 1072 68.4
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 1409.8 1082 66.9
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1407.1 1115 64.4
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 1403.7 1120 65.2
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1398.6 1080 65.6
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1398.3 1064 67.6
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1395.6 1081 65.3
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 1395.2 1039 67.9
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1390.6 1081 64.8
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1385.9 1095 65.1
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1385.2 1081 66.0
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1372.8 1082 64.8
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1369.8 1086 65.3
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1368.6 872 76.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1360.5 1078 65.4
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1358.2 1207 59.1
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1355.5 1172 60.7
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1351.3 1094 63.3
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1330.5 1108 62.7
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1325.8 872 74.7
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1325.8 1083 63.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1307.0 887 72.9
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1302.0 874 73.9
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1297.7 1086 63.0
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1293.9 1081 60.2
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1290.0 870 74.3
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1263.8 846 73.4
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1259.2 818 75.6
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1256.5 860 71.9
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1251.1 1086 60.1
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1231.5 872 70.4
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1212.2 927 65.6
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1208.4 825 71.3
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1203.7 1013 63.1
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1201.4 1006 63.1
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1192.2 1208 54.6
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1186.4 1087 58.0
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1166.0 1047 60.0
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 0.0e+00 1126.3 1046 57.0
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1119.4 1081 56.2
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1082.8 867 63.8
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.8e-305 1052.7 700 74.1
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 8.0e-277 957.6 899 56.0
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 3.3e-262 909.1 1093 45.6
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 3.3e-262 909.1 981 49.7
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.1e-261 906.4 598 74.1
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 6.0e-256 888.3 641 69.3
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 3.5e-248 862.4 1064 45.5
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 8.9e-244 847.8 707 61.5
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 7.6e-211 738.4 951 43.6
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 6.7e-199 698.7 499 71.1
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 9.4e-193 678.3 536 66.8
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 6.6e-162 575.9 405 74.8
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 3.4e-150 537.0 473 60.5
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 7.5e-142 509.2 1074 34.0
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 9.5e-137 492.3 386 64.8
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 1.9e-121 441.4 321 70.4
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.9e-113 414.8 389 55.0
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 8.7e-90 336.3 245 69.4
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 8.8e-74 283.1 296 52.7
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-72 279.3 225 64.9
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.9e-69 268.1 233 60.1
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 4.2e-60 237.7 171 71.3
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 9.4e-60 236.5 213 59.6
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 1.4e-58 232.6 174 63.8
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.2e-57 229.6 220 56.8
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.9e-53 214.9 181 62.4
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 2.8e-48 198.4 208 54.3
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.7e-46 191.8 181 59.7
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.8e-42 179.1 144 65.3
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.4e-39 168.7 176 52.3
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 3.3e-36 158.3 166 50.0
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 7.3e-36 157.1 186 49.5
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 7.3e-36 157.1 155 55.5
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 5.2e-34 151.0 186 47.3
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 8.3e-32 143.7 84 78.6
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 1.4e-31 142.9 172 48.8
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 1.2e-30 139.8 203 43.8
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 1.3e-29 136.3 107 67.3
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.6e-29 134.0 102 62.7
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 6.6e-29 134.0 89 69.7
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 1.5e-28 132.9 690 24.6
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.6e-28 131.0 100 63.0
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 1.2e-27 129.8 174 46.6
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 1.6e-27 129.4 154 50.6
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.3e-24 119.8 99 59.6
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 3.2e-23 115.2 111 55.0
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 4.6e-22 111.3 171 40.4
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 1.7e-21 109.4 77 68.8
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 1.5e-20 106.3 316 27.2
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 3.3e-20 105.1 617 23.3
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 2.6e-17 95.5 139 46.8
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.2e-16 92.4 100 49.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 7.1e-15 87.4 73 63.0
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 7.8e-14 84.0 53 67.9
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 2.3e-13 82.4 206 32.5
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.3e-13 82.4 49 73.5
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.5e-12 79.7 47 74.5
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.9e-12 79.3 49 71.4
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 9.0e-10 70.5 53 71.7
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 1.5e-09 69.7 188 27.7
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 9.9e-09 67.0 53 69.8
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 9.9e-09 67.0 159 35.2
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 2.9e-08 65.5 66 56.1
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 1.9e-07 62.8 115 42.6
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.2e-07 61.6 41 75.6
CSS0017686 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.5e-06 58.5 50 60.0
SGA_v2.0_scaffold7G03828 Striga asiatica HOM05D016705 ORTHO05D004689 3.5e-06 58.5 111 35.1
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 6.0e-06 57.8 61 49.2


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