Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 7.6e-247 856.7 421 100.0
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.7e-214 749.2 424 83.7
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.4e-211 739.6 432 82.9
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 2.3e-211 738.8 425 83.3
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 4.5e-207 724.5 413 85.2
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.0e-206 723.4 413 84.7
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.5e-205 719.5 419 81.9
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 2.5e-205 718.8 425 82.4
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 4.2e-205 718.0 419 82.3
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 7.2e-205 717.2 419 82.1
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 1.6e-204 716.1 425 80.9
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 6.1e-204 714.1 419 81.1
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 8.0e-204 713.8 425 80.7
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 8.0e-204 713.8 418 82.5
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.4e-203 713.0 419 80.9
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 1.8e-203 712.6 423 80.9
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 3.0e-203 711.8 419 81.1
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 2.6e-202 708.8 398 84.2
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 7.5e-202 707.2 428 80.1
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.3e-201 706.4 423 81.8
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 3.7e-201 704.9 422 80.8
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 2.4e-200 702.2 414 81.2
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 2.4e-200 702.2 414 81.2
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 3.1e-200 701.8 420 80.7
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 3.1e-200 701.8 414 80.0
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 5.4e-200 701.0 390 84.6
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 4.5e-199 698.0 425 79.1
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 2.3e-198 695.7 425 79.1
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 6.5e-198 694.1 423 79.0
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 8.6e-198 693.7 417 81.5
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 1.9e-197 692.6 427 78.7
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 1.6e-196 689.5 429 77.2
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.6e-196 689.5 424 78.1
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 2.8e-196 688.7 402 80.1
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 8.0e-196 687.2 427 79.9
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 8.0e-196 687.2 423 76.4
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.0e-195 686.8 423 77.3
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.8e-195 686.0 423 75.9
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 2.3e-195 685.6 414 78.7
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 3.0e-195 685.3 419 77.6
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 5.2e-195 684.5 417 76.5
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 5.2e-195 684.5 423 76.4
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 1.2e-194 683.3 426 78.4
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 4.4e-194 681.4 422 78.4
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 2.2e-193 679.1 419 76.8
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 2.8e-193 678.7 422 76.1
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 3.7e-193 678.3 419 76.6
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 6.3e-193 677.6 414 77.5
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.1e-192 676.8 399 78.9
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 1.4e-192 676.4 414 79.0
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 1.4e-192 676.4 413 79.2
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.4e-192 676.4 414 76.8
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.8e-192 676.0 427 75.2
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 1.2e-191 673.3 423 74.7
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 2.0e-191 672.5 419 77.8
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 1.0e-190 670.2 399 78.2
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 1.1e-189 666.8 418 76.3
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 1.9e-189 666.0 418 76.3
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 2.5e-189 665.6 423 74.7
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 5.6e-189 664.5 418 78.0
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 9.5e-189 663.7 423 74.2
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 1.6e-188 662.9 418 75.8
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 2.8e-188 662.1 423 74.2
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 8.0e-188 660.6 418 76.3
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 6.8e-187 657.5 417 75.3
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 8.9e-187 657.1 390 79.0
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 2.6e-186 655.6 390 79.2
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 3.4e-186 655.2 424 75.0
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 1.7e-185 652.9 401 77.8
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.7e-185 652.9 426 73.9
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 3.7e-185 651.7 425 73.4
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 3.7e-185 651.7 425 73.4
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 6.4e-185 651.0 425 73.2
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 6.4e-185 651.0 425 73.2
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 1.4e-184 649.8 438 73.1
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 1.8e-184 649.4 425 73.2
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 7.0e-184 647.5 424 74.8
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.7e-183 645.6 424 73.6
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 4.6e-183 644.8 423 73.8
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 1.7e-182 642.9 424 73.3
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 3.0e-182 642.1 400 76.5
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 8.6e-182 640.6 418 76.3
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.2e-175 620.2 376 81.6
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 1.6e-175 619.8 409 73.6
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 1.3e-174 616.7 425 69.4
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 5.0e-174 614.8 396 73.0
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 5.2e-171 604.7 372 79.0
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 5.8e-170 601.3 372 78.8
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 2.2e-169 599.4 365 78.4
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 4.1e-168 595.1 348 80.7
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 2.3e-166 589.3 384 69.8
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 2.6e-162 575.9 335 80.0
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 9.9e-162 573.9 350 76.9
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 9.9e-162 573.9 348 77.0
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 7.3e-157 557.8 338 77.2
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 6.2e-156 554.7 323 78.3
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 6.2e-156 554.7 339 77.3
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 6.2e-156 554.7 315 79.7
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 1.4e-155 553.5 325 78.8
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 4.0e-155 552.0 321 77.9
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 5.2e-155 551.6 387 64.3
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 1.0e-150 537.3 383 63.2
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 7.6e-146 521.2 317 74.4
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 4.2e-144 515.4 405 58.5
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 4.6e-143 511.9 407 65.6
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 1.3e-142 510.4 283 83.7
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 5.3e-139 498.4 385 58.7
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 4.5e-130 468.8 264 81.1
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 1.0e-126 457.6 292 74.7
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.1e-107 394.4 399 46.9
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 3.8e-105 386.0 273 63.7
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 7.0e-99 365.2 244 74.2
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 3.5e-98 362.8 247 68.8
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 5.9e-98 362.1 318 58.5
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.0e-94 351.3 399 44.4
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 4.1e-83 312.8 199 74.9
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 3.5e-82 309.7 387 40.6
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.6e-71 274.2 443 35.4
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 3.4e-69 266.5 356 40.7
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 5.6e-64 249.2 325 44.6
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 2.0e-29 134.4 79 70.9
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 6.7e-25 119.4 74 74.3
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 1.5e-24 118.2 70 80.0
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 8.4e-20 102.4 54 79.6
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 1.6e-18 98.2 94 55.3
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 2.1e-15 87.8 130 40.0
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 2.0e-13 81.3 88 50.0
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 5.5e-11 73.2 42 81.0
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 3.5e-10 70.5 55 65.5
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 3.7e-07 60.5 88 39.8


User provided reference genes

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