Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 2.0e-103 379.0 183 100.0
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 1.0e-83 313.5 152 98.0
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 5.2e-83 311.2 152 96.7
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 1.7e-81 306.2 152 95.4
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 9.8e-74 280.4 165 79.4
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 2.2e-73 279.3 152 84.9
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 3.7e-73 278.5 152 83.6
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 3.7e-73 278.5 152 84.2
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 3.7e-73 278.5 152 83.6
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 6.4e-73 277.7 152 84.2
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 6.4e-73 277.7 152 84.2
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 1.1e-72 276.9 152 83.6
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.4e-72 276.6 152 84.2
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 1.4e-72 276.6 152 82.9
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 1.4e-72 276.6 152 83.6
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 1.8e-72 276.2 152 83.6
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 1.8e-72 276.2 152 82.2
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 1.8e-72 276.2 165 80.6
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.8e-72 276.2 152 82.9
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 2.4e-72 275.8 152 82.9
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 3.2e-72 275.4 152 82.9
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 4.1e-72 275.0 165 78.2
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 5.4e-72 274.6 165 79.4
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 7.0e-72 274.2 152 82.2
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 9.2e-72 273.9 152 83.6
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 1.2e-71 273.5 165 80.0
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 1.2e-71 273.5 162 79.0
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.6e-71 273.1 152 82.9
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 1.6e-71 273.1 152 81.6
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 1.6e-71 273.1 152 82.2
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 1.6e-71 273.1 152 82.2
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 2.0e-71 272.7 165 76.4
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 2.7e-71 272.3 152 80.9
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 2.7e-71 272.3 152 81.6
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 3.5e-71 271.9 152 80.9
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 3.5e-71 271.9 149 82.6
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 4.6e-71 271.6 165 77.0
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 4.6e-71 271.6 152 80.9
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 6.0e-71 271.2 152 78.9
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 7.8e-71 270.8 152 82.2
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 7.8e-71 270.8 152 81.6
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 1.0e-70 270.4 165 77.6
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 1.0e-70 270.4 152 79.6
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 1.3e-70 270.0 152 81.6
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 1.7e-70 269.6 152 81.6
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 2.3e-70 269.2 152 80.9
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 2.3e-70 269.2 152 81.6
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 3.0e-70 268.9 152 80.3
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 3.0e-70 268.9 149 81.2
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 6.6e-70 267.7 152 80.9
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 8.6e-70 267.3 152 81.6
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 8.6e-70 267.3 159 78.6
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 1.5e-69 266.5 152 80.3
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 1.9e-69 266.2 152 78.3
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 2.5e-69 265.8 152 79.6
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 2.5e-69 265.8 152 79.6
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 2.5e-69 265.8 152 79.6
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 2.5e-69 265.8 152 80.9
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 2.5e-69 265.8 152 81.6
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 3.3e-69 265.4 152 78.9
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 3.3e-69 265.4 152 78.9
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 3.3e-69 265.4 152 78.9
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 3.3e-69 265.4 152 78.9
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 3.3e-69 265.4 152 79.6
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 3.3e-69 265.4 152 78.9
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 5.6e-69 264.6 152 78.9
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 9.5e-69 263.8 152 78.3
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 9.5e-69 263.8 152 78.3
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 1.6e-68 263.1 152 78.9
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 2.1e-68 262.7 152 77.6
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 2.8e-68 262.3 152 79.6
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 4.7e-68 261.5 152 77.6
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 6.2e-68 261.2 152 75.7
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 8.0e-68 260.8 152 77.0
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 8.0e-68 260.8 172 70.9
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 1.4e-67 260.0 152 76.3
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 1.4e-67 260.0 152 78.3
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 1.8e-67 259.6 152 78.3
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 1.8e-67 259.6 152 75.0
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 1.8e-67 259.6 152 75.0
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 2.3e-67 259.2 144 81.9
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 3.1e-67 258.8 144 81.2
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 3.1e-67 258.8 177 70.6
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 5.2e-67 258.1 149 77.2
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 5.2e-67 258.1 152 75.7
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 8.9e-67 257.3 152 73.7
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 8.9e-67 257.3 152 74.3
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 8.9e-67 257.3 165 72.1
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 1.2e-66 256.9 149 77.2
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 2.0e-66 256.1 152 74.3
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 3.4e-66 255.4 155 76.8
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 5.8e-66 254.6 152 75.0
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 7.5e-66 254.2 152 75.7
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 1.3e-65 253.4 152 76.3
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 2.2e-65 252.7 152 75.0
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 1.9e-64 249.6 152 73.7
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.9e-64 249.6 152 74.3
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 3.2e-64 248.8 214 58.4
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 2.7e-63 245.7 217 58.1
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 6.6e-62 241.1 152 74.3
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 2.3e-59 232.6 152 70.4
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 3.4e-58 228.8 149 67.1
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 5.8e-58 228.0 153 65.4
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 9.9e-58 227.3 136 75.0
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 3.7e-57 225.3 150 67.3
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 4.1e-56 221.9 153 64.7
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 1.0e-54 217.2 125 79.2
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 5.1e-54 214.9 153 64.7
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 2.4e-48 196.1 118 78.0
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 1.2e-47 193.7 118 77.1
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 1.1e-45 187.2 162 63.0
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 1.1e-45 187.2 99 84.8
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 3.3e-45 185.7 100 88.0
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 2.2e-41 172.9 100 73.0
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 2.4e-24 116.3 56 89.3
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 4.2e-24 115.5 97 60.8
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 9.3e-24 114.4 91 58.2
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 9.3e-24 114.4 96 56.2
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 9.3e-24 114.4 106 51.9
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 3.9e-22 109.0 58 81.0
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 9.6e-21 104.4 153 37.3
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 2.1e-20 103.2 67 68.7
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 4.8e-20 102.1 124 45.2
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 8.2e-20 101.3 136 40.4
Hma1.2p1_0277F.1_g111730 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 1.3e-14 84.0 53 73.6
Hma1.2p1_0705F.1_g206905 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 1.3e-14 84.0 53 73.6
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 3.0e-14 82.8 42 88.1
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 1.4e-11 73.9 39 82.1
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 5.9e-10 68.6 53 58.5
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 1.0e-09 67.8 138 29.0
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 2.2e-09 66.6 47 74.5
FvH4_4g10520 Fragaria vesca HOM05D002057 ORTHO05D004921 1.1e-08 64.3 34 76.5
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 1.4e-08 63.9 33 93.9
Zm00001eb334690 Zea mays HOM05D001486 ORTHO05D037216 4.2e-08 62.4 51 58.8
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 2.1e-07 60.1 80 47.5


User provided reference genes

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