Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G515.10 Capsicum annuum HOM05D004178 ORTHO05D005204 2.6e-181 638.6 330 100.0
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 1.1e-168 596.7 330 93.6
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 2.1e-167 592.4 330 93.0
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 9.8e-165 583.6 330 91.2
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 1.2e-157 560.1 330 89.4
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 1.2e-143 513.5 330 78.8
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 7.0e-139 497.7 330 78.2
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 9.2e-139 497.3 330 77.3
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 7.8e-138 494.2 330 76.4
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.1e-136 490.3 330 77.0
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 1.5e-136 490.0 330 74.8
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 5.6e-136 488.0 330 75.5
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 4.7e-135 485.0 330 75.2
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 1.1e-134 483.8 330 75.8
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 6.8e-134 481.1 330 74.8
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 4.4e-133 478.4 330 74.5
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 5.8e-133 478.0 328 74.1
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 1.3e-129 466.8 330 73.9
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 2.5e-128 462.6 330 75.2
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 3.3e-128 462.2 330 71.5
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 7.3e-128 461.1 330 73.3
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 3.6e-127 458.8 330 71.8
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 6.2e-127 458.0 330 70.9
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 6.2e-127 458.0 327 73.7
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 5.2e-126 454.9 331 73.4
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 5.2e-126 454.9 323 73.4
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 2.0e-125 453.0 330 71.5
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 3.4e-125 452.2 330 70.6
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 7.6e-125 451.1 328 71.0
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 9.9e-125 450.7 330 70.6
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.7e-124 449.9 328 71.6
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.7e-124 449.9 330 70.3
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 2.9e-124 449.1 330 70.9
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 3.8e-124 448.7 330 70.9
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 3.8e-124 448.7 330 70.9
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 6.4e-124 448.0 330 70.6
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 6.4e-124 448.0 330 70.6
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 6.4e-124 448.0 330 71.2
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 1.1e-123 447.2 328 71.0
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 1.1e-123 447.2 330 70.9
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 1.4e-123 446.8 328 71.0
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 1.9e-123 446.4 330 68.5
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 4.2e-123 445.3 289 79.2
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 5.4e-123 444.9 330 69.7
FAN10G1085 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.1e-123 444.5 336 69.3
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 1.2e-122 443.7 330 69.1
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 1.2e-122 443.7 330 69.7
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 4.6e-122 441.8 326 69.6
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 3.9e-121 438.7 328 69.8
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 1.1e-120 437.2 330 68.8
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.1e-120 437.2 330 68.8
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 2.5e-120 436.0 311 73.6
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 1.3e-119 433.7 330 69.1
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 2.8e-119 432.6 330 68.2
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 8.1e-119 431.0 330 68.2
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 2.4e-118 429.5 297 73.7
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 3.1e-118 429.1 328 68.0
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 4.4e-117 425.2 310 70.3
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 9.9e-117 424.1 330 68.5
HPP92_022323 Vanilla planifolia HOM05D004178 ORTHO05D005204 2.9e-116 422.5 327 66.4
HPP92_022331 Vanilla planifolia HOM05D004178 ORTHO05D005204 2.9e-116 422.5 327 66.4
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 4.9e-116 421.8 330 67.0
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 3.2e-115 419.1 330 66.7
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 1.6e-114 416.8 308 70.5
Atru.chr1.753 Acer truncatum HOM05D004178 ORTHO05D005204 6.0e-114 414.8 278 75.5
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 1.0e-113 414.1 282 74.5
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 1.3e-113 413.7 330 65.5
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 3.0e-113 412.5 323 66.3
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 3.9e-113 412.1 330 65.5
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 3.9e-113 412.1 334 69.2
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 3.9e-113 412.1 328 65.5
SEGI_03190 Sequoiadendron giganteum HOM05D004178 ORTHO05D005204 3.9e-113 412.1 310 67.4
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 5.1e-113 411.8 328 67.1
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 5.6e-112 408.3 328 67.4
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 5.6e-112 408.3 330 64.8
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 2.1e-111 406.4 328 64.6
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 3.6e-111 405.6 279 75.3
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 8.1e-111 404.4 331 64.0
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 4.0e-110 402.1 330 65.2
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 5.3e-110 401.7 375 60.0
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 6.9e-110 401.4 318 64.2
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 2.6e-109 399.4 330 64.5
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 2.6e-109 399.4 328 64.3
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 1.9e-107 393.3 327 63.0
Hund11836 Selenicereus undatus HOM05D004178 ORTHO05D005204 2.4e-107 392.9 269 74.0
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 4.2e-107 392.1 354 61.9
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 4.2e-107 392.1 330 65.8
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 5.4e-107 391.7 329 61.7
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 2.7e-106 389.4 328 63.4
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 5.1e-105 385.2 330 62.7
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 8.7e-105 384.4 268 73.1
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 1.4e-102 377.1 330 61.5
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 6.9e-102 374.8 358 57.3
FAN03G2333 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.2e-101 374.0 316 63.9
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 1.3e-100 370.5 308 64.0
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 6.5e-100 368.2 329 62.3
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 1.2e-98 364.0 369 55.0
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 6.0e-98 361.7 369 54.7
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.0e-97 360.9 299 64.9
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 3.9e-97 359.0 360 55.0
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 9.6e-96 354.4 328 57.9
Oeu021707.2 Olea europaea HOM05D004178 ORTHO05D005204 1.3e-95 354.0 314 63.1
Pp3c11_11190 Physcomitrium patens HOM05D004178 ORTHO05D005204 1.4e-86 323.9 320 54.7
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 4.6e-82 308.9 330 52.7
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 1.1e-78 297.7 247 65.2
AL6G18010 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 5.5e-75 285.4 180 78.3
SMO364G0410 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 2.7e-74 283.1 313 48.9
Mapoly0003s0057 Marchantia polymorpha HOM05D004178 ORTHO05D005204 2.2e-68 263.5 328 44.5
Ca_27645_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 3.1e-62 243.0 156 78.8
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 5.5e-59 232.3 282 49.3
Cpa.g.sc121.1 Carica papaya HOM05D004178 ORTHO05D005204 2.0e-48 197.2 114 84.2
GSVIVG01014042001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.3e-47 194.5 137 73.7
CBR_g34600 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-46 189.9 288 38.9
CARHR205510 Cardamine hirsuta HOM05D004178 ORTHO05D005204 3.3e-43 179.9 110 80.0
unitig_37.g12493 Utricularia gibba HOM05D004178 ORTHO05D005204 6.3e-39 165.6 282 39.0
MCO11G708 Micromonas commoda HOM05D004178 ORTHO05D005204 1.0e-28 131.7 235 35.7
GSVIVG01014044001 Vitis vinifera HOM05D004178 ORTHO05D005204 5.0e-28 129.4 73 90.4
PRCOL_00006025 Prasinoderma coloniale HOM05D004178 ORTHO05D005204 2.0e-24 117.5 238 29.8
GSVIVG01014041001 Vitis vinifera HOM05D004178 ORTHO05D005204 2.3e-17 94.0 80 57.5
Haze_26632 Corylus avellana HOM05D004178 ORTHO05D005204 1.1e-14 85.1 97 43.3
AUR62042656 Chenopodium quinoa HOM05D004178 ORTHO05D005204 1.9e-14 84.3 53 77.4
Cre12.g525050 Chlamydomonas reinhardtii HOM05D004178 ORTHO05D005204 1.6e-13 81.3 364 22.0
Cpa.g.sc121.4 Carica papaya HOM05D004178 ORTHO05D005204 2.1e-13 80.9 94 47.9
QL07p015796 Quercus lobata HOM05D004178 ORTHO05D005204 4.6e-13 79.7 64 64.1
Cre12.g525100 Chlamydomonas reinhardtii HOM05D004178 ORTHO05D005204 1.7e-12 77.8 187 28.9
Ca_02792_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 1.1e-11 75.1 96 44.8
Cfa025728 Carpinus fangiana HOM05D004178 ORTHO05D005204 1.5e-11 74.7 343 22.2
Hma1.2p1_0515F.1_g170460 Hydrangea macrophylla HOM05D004178 ORTHO05D005204 3.3e-11 73.6 50 72.0
COL.COLO4_14102 Corchorus olitorius HOM05D004178 ORTHO05D005204 4.3e-11 73.2 94 44.7
PGSC0003DMG403030108 Solanum tuberosum HOM05D004178 ORTHO05D005204 6.4e-07 59.3 33 84.8
MCO04G035 Micromonas commoda HOM05D005087 ORTHO05D006427 2.4e-06 57.4 122 30.3
PSO339G3397 Papaver somniferum HOM05D005087 ORTHO05D006427 7.1e-06 55.8 223 26.0


User provided reference genes

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