Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G453.10 Capsicum annuum HOM05D001758 ORTHO05D018856 1.2e-124 449.9 230 100.0
CAN.G205.21 Capsicum annuum HOM05D001758 ORTHO05D018856 4.1e-61 238.8 220 59.5
CAN.G968.9 Capsicum annuum HOM05D001758 ORTHO05D018856 1.7e-54 216.9 206 59.2
Sopen08g029630 Solanum pennellii HOM05D001758 ORTHO05D004430 1.4e-48 197.2 536 31.3
Solyc08g081320.3 Solanum lycopersicum HOM05D001758 ORTHO05D004430 1.8e-48 196.8 536 31.3
Peaxi162Scf00074g02036 Petunia axillaris HOM05D001758 ORTHO05D004430 2.6e-47 193.0 537 30.9
PGSC0003DMG400012194 Solanum tuberosum HOM05D001758 ORTHO05D004430 2.6e-47 193.0 536 31.9
Nitab4.5_0001522g0060 Nicotiana tabacum HOM05D001758 ORTHO05D004430 1.7e-46 190.3 537 30.9
Nitab4.5_0002975g0020 Nicotiana tabacum HOM05D001758 ORTHO05D004430 2.9e-46 189.5 537 30.7
CAN.G532.6 Capsicum annuum HOM05D001758 ORTHO05D004430 1.6e-44 183.7 536 31.0
CAN.G594.6 Capsicum annuum HOM05D001758 ORTHO05D018856 1.6e-41 173.7 112 79.5
vmacro13195 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 6.4e-38 161.8 510 28.2
CAN.G1081.1 Capsicum annuum HOM05D001758 ORTHO05D018856 8.3e-38 161.4 105 77.1
SGA_v2.0_scaffold144G35913 Striga asiatica HOM05D001758 ORTHO05D004430 4.6e-36 155.6 91 84.6
CSS0019297 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 1.0e-35 154.5 91 83.5
Dinv38922 Davidia involucrata HOM05D001758 ORTHO05D004430 1.0e-35 154.5 91 83.5
Rhsim07G0088700 Rhododendron simsii HOM05D001758 ORTHO05D004430 1.0e-35 154.5 91 83.5
MSTRG.1854 Avicennia marina HOM05D001758 ORTHO05D004430 1.7e-35 153.7 91 82.4
Migut.E01190 Erythranthe guttata HOM05D001758 ORTHO05D004430 1.7e-35 153.7 91 82.4
Atru.chr9.2154 Acer truncatum HOM05D001758 ORTHO05D004430 2.3e-35 153.3 91 82.4
COL.COLO4_34497 Corchorus olitorius HOM05D001758 ORTHO05D004430 2.3e-35 153.3 91 82.4
PSO541G5667 Papaver somniferum HOM05D001758 ORTHO05D004430 2.3e-35 153.3 91 82.4
PSO675G0536 Papaver somniferum HOM05D001758 ORTHO05D004430 2.3e-35 153.3 91 82.4
arahy.Tifrunner.gnm1.ann1.AY0C6D Arachis hypogaea HOM05D001758 ORTHO05D004430 3.0e-35 152.9 91 82.4
arahy.Tifrunner.gnm1.ann1.KK02P6 Arachis hypogaea HOM05D001758 ORTHO05D004430 3.0e-35 152.9 91 82.4
CANSAT21G2030 Cannabis sativa HOM05D001758 ORTHO05D004430 3.9e-35 152.5 91 81.3
Psat0s5381g0040 Pisum sativum HOM05D001758 ORTHO05D004430 3.9e-35 152.5 91 81.3
SalBow1G0547 Salvia bowleyana HOM05D001758 ORTHO05D004430 3.9e-35 152.5 91 82.4
CSS0009285 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 82.4
Ciclev10018786m.g Citrus clementina HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 81.3
Cc08_g15000 Coffea canephora HOM05D001758 ORTHO05D004430 5.1e-35 152.1 540 27.2
Duzib205G0508 Durio zibethinus HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 81.3
Lj8A218T22 Lonicera japonica HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 81.3
MD06G1087800 Malus domestica HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 81.3
MD14G1108600 Malus domestica HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 81.3
Prupe.5G103900 Prunus persica HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 81.3
HPP92_008911 Vanilla planifolia HOM05D001758 ORTHO05D004430 5.1e-35 152.1 91 81.3
Actinidia14582 Actinidia chinensis HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 81.3
ClCG01G002530 Citrullus lanatus HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 81.3
MELO3C005693.2 Cucumis melo HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 81.3
Eucgr.D01829 Eucalyptus grandis HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 80.2
Glyma.01G227000 Glycine max HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 80.2
Gohir.D08G202500 Gossypium hirsutum HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 82.4
Gorai.004G213900 Gossypium raimondii HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 82.4
MBI07_g21076_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 82.4
Nn5g30834 Nelumbo nucifera HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 81.3
Sed0001016 Sechium edule HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 81.3
Sed0023378 Sechium edule HOM05D001758 ORTHO05D004430 6.6e-35 151.8 91 81.3
ECA233G5934 Erigeron canadensis HOM05D001758 ORTHO05D004430 8.6e-35 151.4 91 81.3
CSS0042527 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 81.3
DCAR_008367 Daucus carota HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 81.3
Lj3g0022998 Lotus japonicus HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 80.2
Nn6g31920 Nelumbo nucifera HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 80.2
Os03g0355600 Oryza sativa ssp. japonica HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 80.2
Psat7g179680 Pisum sativum HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 80.2
Sc01g0009710 Simmondsia chinensis HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 82.4
Thecc.03G282700 Theobroma cacao HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 80.2
TAR625G0205 Trochodendron aralioides HOM05D001758 ORTHO05D004430 1.1e-34 151.0 91 81.3
Actinidia33743 Actinidia chinensis HOM05D001758 ORTHO05D004430 1.5e-34 150.6 91 81.3
Oeu007743.2 Olea europaea HOM05D001758 ORTHO05D004430 1.5e-34 150.6 91 81.3
CSS0038252 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 1.9e-34 150.2 523 27.2
Glyma.11G015700 Glycine max HOM05D001758 ORTHO05D004430 1.9e-34 150.2 91 79.1
ClCG02G002170 Citrullus lanatus HOM05D001758 ORTHO05D004430 2.5e-34 149.8 91 80.2
MELO3C018841.2 Cucumis melo HOM05D001758 ORTHO05D004430 2.5e-34 149.8 91 80.2
ECA240G1636 Erigeron canadensis HOM05D001758 ORTHO05D004430 2.5e-34 149.8 91 80.2
Medtr4g076210 Medicago truncatula HOM05D001758 ORTHO05D004430 2.5e-34 149.8 91 79.1
TPR.G22570 Trifolium pratense HOM05D001758 ORTHO05D004430 2.5e-34 149.8 91 79.1
GSVIVG01019391001 Vitis vinifera HOM05D001758 ORTHO05D004430 2.5e-34 149.8 91 79.1
Zm00001eb394540 Zea mays HOM05D001758 ORTHO05D004430 2.5e-34 149.8 91 80.2
Aqoxy5G01113 Aquilegia oxysepala HOM05D001758 ORTHO05D004430 3.3e-34 149.4 91 80.2
CsaV3_5G002640 Cucumis sativus L. HOM05D001758 ORTHO05D004430 3.3e-34 149.4 91 80.2
Glyma.12G021600 Glycine max HOM05D001758 ORTHO05D004430 3.3e-34 149.4 91 80.2
Phvul.002G034100 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 3.3e-34 149.4 91 79.1
TAR381G1011 Trochodendron aralioides HOM05D001758 ORTHO05D004430 3.3e-34 149.4 91 80.2
VMungo1215G2939 Vigna mungo HOM05D001758 ORTHO05D004430 3.3e-34 149.4 91 79.1
Cfa012203 Carpinus fangiana HOM05D001758 ORTHO05D004430 4.3e-34 149.1 91 79.1
Haze_08813 Corylus avellana HOM05D001758 ORTHO05D004430 4.3e-34 149.1 91 79.1
Oeu011033.1 Olea europaea HOM05D001758 ORTHO05D004430 4.3e-34 149.1 91 79.1
TWI60G1699 Tripterygium wilfordii HOM05D001758 ORTHO05D004430 4.3e-34 149.1 91 79.1
CAN.G491.13 Capsicum annuum HOM05D001758 ORTHO05D018856 5.6e-34 148.7 127 63.8
CsaV3_7G003330 Cucumis sativus L. HOM05D001758 ORTHO05D004430 5.6e-34 148.7 91 79.1
FvH4_5g02830 Fragaria vesca HOM05D001758 ORTHO05D004430 5.6e-34 148.7 91 78.0
FAN08G0671 Fragaria x ananassa HOM05D001758 ORTHO05D004430 5.6e-34 148.7 91 78.0
FAN18G3406 Fragaria x ananassa HOM05D001758 ORTHO05D004430 5.6e-34 148.7 91 78.0
Potri.003G130400 Populus trichocarpa HOM05D001758 ORTHO05D004430 5.6e-34 148.7 91 79.1
RcHm_v2.0_Chr7g0197091 Rosa chinensis HOM05D001758 ORTHO05D004430 5.6e-34 148.7 91 78.0
Hund14840 Selenicereus undatus HOM05D001758 ORTHO05D004430 5.6e-34 148.7 91 80.2
HanXRQChr13g0416041 Helianthus annuus HOM05D001758 ORTHO05D004430 7.3e-34 148.3 91 79.1
Zm00001eb017130 Zea mays HOM05D001758 ORTHO05D004430 7.3e-34 148.3 91 79.1
Duzib084G0730 Durio zibethinus HOM05D001758 ORTHO05D004430 9.5e-34 147.9 91 79.1
Oeu042339.1 Olea europaea HOM05D001758 ORTHO05D004430 9.5e-34 147.9 91 79.1
vmacro13146 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 9.5e-34 147.9 91 80.2
ATR0329G044 Amborella trichopoda HOM05D001758 ORTHO05D004430 1.2e-33 147.5 91 79.1
CiPaw.12G091200 Carya illinoinensis HOM05D001758 ORTHO05D004430 1.2e-33 147.5 91 78.0
Lsat_1_v5_gn_6_5441 Lactuca sativa HOM05D001758 ORTHO05D004430 1.2e-33 147.5 91 80.2
EL10Ac5g12803 Beta vulgaris HOM05D001758 ORTHO05D004430 1.6e-33 147.1 91 79.1
FAN04G0007 Fragaria x ananassa HOM05D001758 ORTHO05D004430 1.6e-33 147.1 91 76.9
Gohir.A08G184050 Gossypium hirsutum HOM05D001758 ORTHO05D004430 1.6e-33 147.1 87 82.8
AUR62010715 Chenopodium quinoa HOM05D001758 ORTHO05D004430 2.1e-33 146.7 91 79.1
AUR62027253 Chenopodium quinoa HOM05D001758 ORTHO05D004430 2.1e-33 146.7 91 79.1
Aa31LG9G10850 Aethionema arabicum HOM05D001758 ORTHO05D004430 2.8e-33 146.4 91 78.0
QL12p032420 Quercus lobata HOM05D001758 ORTHO05D004430 2.8e-33 146.4 91 78.0
SGA_v2.0_scaffold48G18078 Striga asiatica HOM05D001758 ORTHO05D004430 2.8e-33 146.4 531 29.2
THA.LOC104814663 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 2.8e-33 146.4 91 78.0
VMungo1127G1185 Vigna mungo HOM05D001758 ORTHO05D004430 2.8e-33 146.4 91 76.9
Manes.02G136100 Manihot esculenta HOM05D001758 ORTHO05D004430 3.6e-33 146.0 91 78.0
Ah.07g196400 Amaranthus hybridus HOM05D001758 ORTHO05D004430 4.7e-33 145.6 91 78.0
FAN13G1114 Fragaria x ananassa HOM05D001758 ORTHO05D004430 4.7e-33 145.6 91 76.9
Sabra01G0076400 Salix brachista HOM05D001758 ORTHO05D004430 4.7e-33 145.6 91 75.8
CAN.G594.5 Capsicum annuum HOM05D000309 ORTHO05D000271 6.2e-33 145.2 91 81.3
unitig_62.g23539 Utricularia gibba HOM05D001758 ORTHO05D004430 6.2e-33 145.2 91 79.1
CDE02G4367 Ceratophyllum demersum HOM05D001758 ORTHO05D004430 8.1e-33 144.8 91 76.9
Lalb_Chr16g0376841 Lupinus albus HOM05D001758 ORTHO05D004430 8.1e-33 144.8 91 78.0
CDE08G1656 Ceratophyllum demersum HOM05D001758 ORTHO05D004430 1.1e-32 144.4 91 76.9
Lsat_1_v5_gn_6_86320 Lactuca sativa HOM05D001758 ORTHO05D004430 1.4e-32 144.1 91 76.9
Phvul.011G078200 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 1.4e-32 144.1 91 74.7
Gohir.A03G019300 Gossypium hirsutum HOM05D001758 ORTHO05D004430 1.8e-32 143.7 91 76.9
Gohir.D03G149700 Gossypium hirsutum HOM05D001758 ORTHO05D004430 1.8e-32 143.7 91 76.9
Gorai.003G157000 Gossypium raimondii HOM05D001758 ORTHO05D004430 1.8e-32 143.7 91 76.9
Lalb_Chr05g0211451 Lupinus albus HOM05D001758 ORTHO05D004430 1.8e-32 143.7 91 76.9
Potri.001G101400 Populus trichocarpa HOM05D001758 ORTHO05D004430 1.8e-32 143.7 91 74.7
AT4G11380 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 2.4e-32 143.3 91 78.0
HanXRQChr13g0394171 Helianthus annuus HOM05D001758 ORTHO05D004430 3.1e-32 142.9 91 76.9
BcaB01g01638 Brassica carinata HOM05D001758 ORTHO05D004430 4.0e-32 142.5 91 76.9
BcaC04g21134 Brassica carinata HOM05D001758 ORTHO05D004430 4.0e-32 142.5 91 76.9
C09p35180 Brassica napus HOM05D001758 ORTHO05D004430 4.0e-32 142.5 91 76.9
BolC9t56364H Brassica oleracea HOM05D001758 ORTHO05D004430 4.0e-32 142.5 91 76.9
BraA09t38347Z Brassica rapa HOM05D001758 ORTHO05D004430 4.0e-32 142.5 91 76.9
THA.LOC104806416 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 4.0e-32 142.5 91 74.7
THA.LOC104813023 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 4.0e-32 142.5 91 75.8
AL6G45790 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 1.2e-31 141.0 91 75.8
Carub.0006s3029 Capsella rubella HOM05D001758 ORTHO05D004430 1.2e-31 141.0 91 75.8
Sp6g06070 Schrenkiella parvula HOM05D001758 ORTHO05D004430 1.2e-31 141.0 91 75.8
AL7G30000 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 1.5e-31 140.6 91 75.8
CARHR255190 Cardamine hirsuta HOM05D001758 ORTHO05D004430 1.5e-31 140.6 91 74.7
Carub.0007s1765 Capsella rubella HOM05D001758 ORTHO05D004430 2.6e-31 139.8 91 74.7
Aa31LG6G6650 Aethionema arabicum HOM05D001758 ORTHO05D004430 3.4e-31 139.4 91 75.8
A09p27770 Brassica napus HOM05D001758 ORTHO05D004430 3.4e-31 139.4 91 75.8
Thhalv10024360m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 3.4e-31 139.4 91 74.7
Sp7g21360 Schrenkiella parvula HOM05D001758 ORTHO05D004430 3.4e-31 139.4 91 74.7
Thhalv10028407m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 4.4e-31 139.0 91 74.7
CAN.G1081.2 Capsicum annuum HOM05D001758 ORTHO05D004430 5.8e-31 138.7 87 80.5
Mapoly0002s0295 Marchantia polymorpha HOM05D001758 ORTHO05D004430 7.6e-31 138.3 91 74.7
A03p54320 Brassica napus HOM05D001758 ORTHO05D004430 9.9e-31 137.9 91 73.6
C07p52720 Brassica napus HOM05D001758 ORTHO05D004430 9.9e-31 137.9 91 73.6
BolC7t45772H Brassica oleracea HOM05D001758 ORTHO05D004430 9.9e-31 137.9 91 73.6
BraA03t14494Z Brassica rapa HOM05D001758 ORTHO05D004430 9.9e-31 137.9 91 73.6
Pp3c14_2460 Physcomitrium patens HOM05D001758 ORTHO05D004430 9.9e-31 137.9 91 74.7
AT4G23460 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 1.3e-30 137.5 91 73.6
Pp3c1_19340 Physcomitrium patens HOM05D001758 ORTHO05D004430 1.3e-30 137.5 91 73.6
Pp3c2_18140 Physcomitrium patens HOM05D001758 ORTHO05D004430 1.7e-30 137.1 91 73.6
AagrBONN_evm.TU.Sc2ySwM_117.2557 Anthoceros agrestis HOM05D001758 ORTHO05D004430 3.8e-30 136.0 91 73.6
CAN.G453.7 Capsicum annuum HOM05D001758 ORTHO05D004430 8.4e-30 134.8 78 83.3
Duzib068G1315 Durio zibethinus HOM05D001758 ORTHO05D004430 1.9e-29 133.7 81 80.2
Lj2C182T2 Lonicera japonica HOM05D001758 ORTHO05D004430 1.9e-29 133.7 91 71.4
SMO298G0016 Selaginella moellendorffii HOM05D001758 ORTHO05D004430 5.4e-29 132.1 91 70.3
CBR_g10902 Chara braunii HOM05D001758 ORTHO05D004430 1.6e-28 130.6 91 68.1
Lsat_1_v5_gn_3_6140 Lactuca sativa HOM05D001758 ORTHO05D004430 3.5e-28 129.4 91 68.1
Sabra03G0092700 Salix brachista HOM05D001758 ORTHO05D004430 3.9e-27 125.9 132 53.0
CAN.G849.10 Capsicum annuum HOM05D001758 ORTHO05D004430 1.6e-25 120.6 128 53.9
CAN.G453.6 Capsicum annuum HOM05D001758 ORTHO05D018856 3.8e-22 109.4 133 47.4
DCAR_005564 Daucus carota HOM05D001758 ORTHO05D004430 1.1e-21 107.8 137 46.7
Gohir.A08G184000 Gossypium hirsutum HOM05D001758 ORTHO05D004430 7.1e-21 105.1 142 47.2
Cpa.g.sc180.12 Carica papaya HOM05D001758 ORTHO05D004430 2.7e-20 103.2 59 84.7
MBI10_g48086_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 3.5e-20 102.8 91 60.4
MCO01G139 Micromonas commoda HOM05D001758 ORTHO05D004430 4.6e-20 102.4 92 55.4
DCAR_005565 Daucus carota HOM05D001758 ORTHO05D004430 1.7e-19 100.5 59 83.1
CAN.G458.13 Capsicum annuum HOM05D001758 ORTHO05D004430 8.7e-19 98.2 60 83.3
MBI10_g48303_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 8.7e-19 98.2 59 79.7
CAN.G849.9 Capsicum annuum HOM05D001758 ORTHO05D004430 5.6e-18 95.5 60 76.7
Cpa.g.sc180.11 Carica papaya HOM05D001758 ORTHO05D004430 5.6e-18 95.5 153 43.1
CAN.G279.5 Capsicum annuum HOM05D001758 ORTHO05D018856 1.3e-17 94.4 55 87.3
Psat6g071240 Pisum sativum HOM05D001758 ORTHO05D004430 1.3e-17 94.4 56 82.1
SEGI_09797 Sequoiadendron giganteum HOM05D001758 ORTHO05D004430 6.2e-17 92.0 59 78.0
Cfa025216 Carpinus fangiana HOM05D001758 ORTHO05D004430 8.1e-17 91.7 87 48.3
Cre11.g478156 Chlamydomonas reinhardtii HOM05D001758 ORTHO05D004430 1.7e-14 84.0 66 62.1
Glyma.11G095501 Glycine max HOM05D001758 ORTHO05D004430 1.7e-14 84.0 135 38.5
SEGI_36929 Sequoiadendron giganteum HOM05D001758 ORTHO05D004430 2.4e-13 80.1 138 37.7
Lsat_1_v5_gn_8_132701 Lactuca sativa HOM05D001758 ORTHO05D228890 3.0e-11 73.2 56 62.5
Actinidia27374 Actinidia chinensis HOM05D001758 ORTHO05D004430 8.7e-11 71.6 288 27.4
PRCOL_00003609 Prasinoderma coloniale HOM05D001758 ORTHO05D004430 1.3e-09 67.8 51 58.8
C03p35440 Brassica napus HOM05D001758 ORTHO05D000557 1.1e-08 64.7 98 42.9
Lsat_1_v5_gn_7_97200 Lactuca sativa HOM05D000746 ORTHO05D000573 4.0e-08 62.8 41 73.2
Cfa024790 Carpinus fangiana HOM05D001758 ORTHO05D004430 5.8e-07 58.9 102 30.4
Lj2A182G26 Lonicera japonica HOM05D001758 ORTHO05D023731 5.8e-07 58.9 103 41.7
unitig_62.g23540 Utricularia gibba HOM05D001758 ORTHO05D017200 5.8e-07 58.9 47 63.8


User provided reference genes

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