Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G337.13 Capsicum annuum HOM05D001458 ORTHO05D007170 2.9e-148 528.5 256 100.0
CAN.G337.9 Capsicum annuum HOM05D001458 ORTHO05D007170 8.9e-73 277.7 310 53.5
CAN.G2569.1 Capsicum annuum HOM05D001458 ORTHO05D007170 9.8e-72 274.2 310 53.2
Nitab4.5_0006886g0030 Nicotiana tabacum HOM05D001458 ORTHO05D007170 3.0e-68 262.7 279 54.8
Sopen07g033650 Solanum pennellii HOM05D001458 ORTHO05D007170 1.5e-67 260.4 304 53.3
Nitab4.5_0000461g0220 Nicotiana tabacum HOM05D001458 ORTHO05D007170 3.5e-61 239.2 233 59.2
CSS0027160 Camellia sinensis var. sinensis HOM05D001458 ORTHO05D007170 9.9e-56 221.1 276 47.5
CSS0006064 Camellia sinensis var. sinensis HOM05D001458 ORTHO05D007170 2.2e-55 219.9 276 47.1
Dinv40848 Davidia involucrata HOM05D001458 ORTHO05D007170 5.4e-54 215.3 328 42.1
Rhsim04G0013200 Rhododendron simsii HOM05D001458 ORTHO05D007170 7.8e-53 211.5 279 45.9
CAN.G1110.16 Capsicum annuum HOM05D001458 ORTHO05D007170 1.3e-52 210.7 107 97.2
HanXRQChr05g0161861 Helianthus annuus HOM05D001458 ORTHO05D007170 1.1e-51 207.6 298 44.6
Actinidia35397 Actinidia chinensis HOM05D001458 ORTHO05D007170 4.3e-51 205.7 306 42.2
GSVIVG01014659001 Vitis vinifera HOM05D001458 ORTHO05D007170 1.6e-50 203.8 359 39.3
FAN25G1628 Fragaria x ananassa HOM05D001458 ORTHO05D007170 1.8e-49 200.3 313 41.2
Cfa020207 Carpinus fangiana HOM05D001458 ORTHO05D007170 2.4e-49 199.9 309 40.8
Cc05_g14850 Coffea canephora HOM05D001458 ORTHO05D007170 4.0e-49 199.1 302 41.4
FvH4_3g29420 Fragaria vesca HOM05D001458 ORTHO05D007170 6.9e-49 198.4 325 40.6
Haze_09810 Corylus avellana HOM05D001458 ORTHO05D007170 9.0e-49 198.0 309 40.1
QL08p004686 Quercus lobata HOM05D001458 ORTHO05D007170 1.5e-48 197.2 275 43.6
PSO210G4199 Papaver somniferum HOM05D001458 ORTHO05D007170 2.0e-48 196.8 298 39.3
TWI39G0056 Tripterygium wilfordii HOM05D001458 ORTHO05D007170 3.4e-48 196.1 309 40.5
PGSC0003DMG401022175 Solanum tuberosum HOM05D001458 ORTHO05D007170 9.9e-48 194.5 110 89.1
Hma1.2p1_0889F.1_g232825 Hydrangea macrophylla HOM05D001458 ORTHO05D007170 1.3e-47 194.1 282 44.0
Oeu005966.1 Olea europaea HOM05D001458 ORTHO05D007170 1.3e-47 194.1 315 39.7
Prupe.4G241800 Prunus persica HOM05D001458 ORTHO05D007170 2.9e-47 193.0 301 40.9
RcHm_v2.0_Chr5g0053841 Rosa chinensis HOM05D001458 ORTHO05D007170 3.8e-47 192.6 307 39.7
Sed0010799 Sechium edule HOM05D001458 ORTHO05D007170 3.8e-47 192.6 309 39.5
Aa31LG8G370 Aethionema arabicum HOM05D001458 ORTHO05D007170 4.9e-47 192.2 295 40.0
CiPaw.11G202700 Carya illinoinensis HOM05D001458 ORTHO05D007170 4.9e-47 192.2 296 43.2
MD11G1201200 Malus domestica HOM05D001458 ORTHO05D007170 8.4e-47 191.4 303 40.3
Potri.001G366700 Populus trichocarpa HOM05D001458 ORTHO05D007170 1.4e-46 190.7 309 40.5
LjContig00081g0000365 Lotus japonicus HOM05D001458 ORTHO05D007170 1.9e-46 190.3 303 39.9
Gohir.D01G075900 Gossypium hirsutum HOM05D001458 ORTHO05D007170 2.4e-46 189.9 305 41.0
Gorai.002G099100 Gossypium raimondii HOM05D001458 ORTHO05D007170 2.4e-46 189.9 293 41.6
THA.LOC104810290 Tarenaya hassleriana HOM05D001458 ORTHO05D007170 3.2e-46 189.5 298 41.3
BraA01t04073Z Brassica rapa HOM05D001458 ORTHO05D007170 4.2e-46 189.1 286 41.3
Duzib170G0318 Durio zibethinus HOM05D001458 ORTHO05D007170 4.2e-46 189.1 304 40.5
Nn1g03205 Nelumbo nucifera HOM05D001458 ORTHO05D007170 4.2e-46 189.1 326 39.6
Solyc07g065440.4 Solanum lycopersicum HOM05D001458 ORTHO05D007170 4.2e-46 189.1 110 85.5
Eucgr.F03701 Eucalyptus grandis HOM05D001458 ORTHO05D007170 7.1e-46 188.3 279 40.5
Aqoxy1G04244 Aquilegia oxysepala HOM05D001458 ORTHO05D007170 9.3e-46 188.0 304 39.5
PGR031G1458 Punica granatum HOM05D001458 ORTHO05D007170 9.3e-46 188.0 298 40.9
BolC1t05139H Brassica oleracea HOM05D001458 ORTHO05D007170 1.6e-45 187.2 286 40.9
Thhalv10022332m.g Eutrema salsugineum HOM05D001458 ORTHO05D007170 4.6e-45 185.7 286 40.6
Lj1g0016902 Lotus japonicus HOM05D001458 ORTHO05D007170 4.6e-45 185.7 311 38.9
Gohir.A01G090600 Gossypium hirsutum HOM05D001458 ORTHO05D007170 6.0e-45 185.3 288 40.3
Migut.M01660 Erythranthe guttata HOM05D001458 ORTHO05D007170 1.0e-44 184.5 303 39.6
A01p40380 Brassica napus HOM05D001458 ORTHO05D007170 1.3e-44 184.1 309 40.1
AL3G24910 Arabidopsis lyrata HOM05D001458 ORTHO05D007170 3.9e-44 182.6 298 39.3
Medtr5g095090 Medicago truncatula HOM05D001458 ORTHO05D007170 3.9e-44 182.6 312 37.5
Phvul.008G278300 Phaseolus vulgaris HOM05D001458 ORTHO05D007170 3.9e-44 182.6 311 38.3
C01p51920 Brassica napus HOM05D001458 ORTHO05D007170 5.1e-44 182.2 299 41.1
CARHR087750 Cardamine hirsuta HOM05D001458 ORTHO05D007170 5.1e-44 182.2 298 39.3
Psat4g050240 Pisum sativum HOM05D001458 ORTHO05D007170 6.6e-44 181.8 308 38.6
SGA_v2.0_scaffold171G38881 Striga asiatica HOM05D003514 ORTHO05D004280 8.7e-44 181.4 332 38.6
Carub.0003s1251 Capsella rubella HOM05D001458 ORTHO05D007170 1.1e-43 181.0 298 38.9
ECA236G2484 Erigeron canadensis HOM05D003423 ORTHO05D003910 1.1e-43 181.0 291 40.2
FAN16G1179 Fragaria x ananassa HOM05D001458 ORTHO05D007170 1.1e-43 181.0 261 42.9
TPR.G14176 Trifolium pratense HOM05D001458 ORTHO05D007170 1.9e-43 180.3 338 37.3
Psat2g008560 Pisum sativum HOM05D001458 ORTHO05D007170 3.3e-43 179.5 297 38.0
arahy.Tifrunner.gnm1.ann1.ARH0VQ Arachis hypogaea HOM05D001458 ORTHO05D007170 4.3e-43 179.1 325 38.5
MELO3C024924.2 Cucumis melo HOM05D001458 ORTHO05D007170 4.3e-43 179.1 309 36.6
AT3G13170 Arabidopsis thaliana HOM05D001458 ORTHO05D007170 9.6e-43 177.9 298 38.3
arahy.Tifrunner.gnm1.ann1.5UA89R Arachis hypogaea HOM05D001458 ORTHO05D007170 4.0e-41 172.6 340 36.5
CsaV3_7G017280 Cucumis sativus L. HOM05D001458 ORTHO05D007170 5.3e-41 172.2 301 36.9
CsaV3_UNG200520 Cucumis sativus L. HOM05D001458 ORTHO05D007170 5.3e-41 172.2 301 36.9
CsaV3_UNG214460 Cucumis sativus L. HOM05D001458 ORTHO05D007170 5.3e-41 172.2 301 36.9
vmacro09653 Vaccinium macrocarpon HOM05D001458 ORTHO05D007170 6.9e-41 171.8 296 39.9
Peaxi162Scf00612g00139 Petunia axillaris HOM05D001458 ORTHO05D007170 3.4e-40 169.5 107 80.4
ClCG09G021210 Citrullus lanatus HOM05D001458 ORTHO05D007170 4.5e-40 169.1 360 33.6
Peaxi162Scf00612g00028 Petunia axillaris HOM05D001458 ORTHO05D007170 2.2e-39 166.8 107 79.4
CANSAT11G0117 Cannabis sativa HOM05D001458 ORTHO05D007170 1.1e-38 164.5 326 35.3
SalBow8G1206 Salvia bowleyana HOM05D001458 ORTHO05D007170 1.9e-38 163.7 296 38.5
CsaV3_7G017270 Cucumis sativus L. HOM05D001458 ORTHO05D007170 7.1e-38 161.8 260 38.8
unitig_747.g21640 Utricularia gibba HOM05D001458 ORTHO05D007170 7.1e-38 161.8 301 37.9
Sc03g0011170 Simmondsia chinensis HOM05D001458 ORTHO05D007170 9.3e-38 161.4 317 34.7
CsaV3_7G018280 Cucumis sativus L. HOM05D001458 ORTHO05D007170 6.0e-37 158.7 275 37.1
ATR0827G179 Amborella trichopoda HOM05D001458 ORTHO05D007170 8.7e-36 154.8 297 34.3
Ciclev10010322m.g Citrus clementina HOM05D001458 ORTHO05D007170 2.5e-35 153.3 340 32.6
FAN11G2921 Fragaria x ananassa HOM05D001458 ORTHO05D007170 3.3e-35 152.9 317 35.6
Lj8A178T76 Lonicera japonica HOM05D001458 ORTHO05D007170 7.4e-35 151.8 244 40.6
MBI16_g22433_MAGBIO Magnolia biondii HOM05D001458 ORTHO05D007170 3.7e-34 149.4 325 36.0
Medtr5g095040 Medicago truncatula HOM05D001458 ORTHO05D007170 4.0e-33 146.0 321 33.3
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 2.2e-31 140.2 263 35.4
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 2.2e-31 140.2 263 35.4
Os03g0752200 Oryza sativa ssp. japonica HOM05D001458 ORTHO05D007170 6.4e-31 138.7 299 34.1
PSO210G1564 Papaver somniferum HOM05D001458 ORTHO05D007170 7.1e-30 135.2 245 36.7
AUR62017079 Chenopodium quinoa HOM05D001458 ORTHO05D007170 9.3e-30 134.8 284 33.5
Cpa.g.sc12.159 Carica papaya HOM05D001458 ORTHO05D007170 1.2e-29 134.4 112 60.7
Sabra16G0240000 Salix brachista HOM05D001458 ORTHO05D007170 2.7e-29 133.3 109 60.6
AUR62036436 Chenopodium quinoa HOM05D001458 ORTHO05D007170 1.3e-28 131.0 285 33.0
QL08p004639 Quercus lobata HOM05D001458 ORTHO05D007170 1.3e-28 131.0 109 61.5
COL.COLO4_07102 Corchorus olitorius HOM05D001458 ORTHO05D007170 5.1e-28 129.0 278 33.1
Atru.chr2.3674 Acer truncatum HOM05D001458 ORTHO05D007170 6.7e-28 128.6 110 59.1
SHI26533 Sapria himalayana HOM05D001458 ORTHO05D007170 2.1e-26 123.6 294 31.6
Lsat_1_v5_gn_4_63960 Lactuca sativa HOM05D001458 ORTHO05D007170 1.1e-25 121.3 202 39.6
Manes.15G061000 Manihot esculenta HOM05D001458 ORTHO05D007170 4.0e-25 119.4 235 37.4
SEGI_24669 Sequoiadendron giganteum HOM05D001458 ORTHO05D007170 9.0e-25 118.2 300 30.3
EL10Ac4g07597 Beta vulgaris HOM05D001458 ORTHO05D007170 1.3e-23 114.4 269 31.2
VMungo0647G0207 Vigna mungo HOM05D001458 ORTHO05D007170 5.5e-22 109.0 222 34.2
Glyma.02G299600 Glycine max HOM05D001458 ORTHO05D007170 1.6e-21 107.5 232 34.1
Peaxi162Scf00612g00138 Petunia axillaris HOM05D001458 ORTHO05D007170 2.5e-19 100.1 81 61.7
Zm00001eb214790 Zea mays HOM05D001458 ORTHO05D007170 2.5e-19 100.1 112 48.2
Peaxi162Scf00612g00027 Petunia axillaris HOM05D001458 ORTHO05D007170 1.3e-18 97.8 76 63.2
Solyc07g065430.2 Solanum lycopersicum HOM05D001458 ORTHO05D007170 3.7e-18 96.3 81 61.7
Lalb_Chr04g0247891 Lupinus albus HOM05D001458 ORTHO05D007170 6.3e-18 95.5 128 44.5
Thecc.07G015600 Theobroma cacao HOM05D001458 ORTHO05D007170 4.5e-16 89.4 81 54.3
Pp3c6_18230 Physcomitrium patens HOM05D001458 ORTHO05D007170 7.7e-16 88.6 291 27.5
Hund01905 Selenicereus undatus HOM05D001458 ORTHO05D007170 2.2e-15 87.0 107 48.6
Cpa.g.sc12.160 Carica papaya HOM05D001458 ORTHO05D007170 2.9e-15 86.7 81 53.1
HanXRQChr05g0161851 Helianthus annuus HOM05D001458 ORTHO05D007170 8.5e-15 85.1 75 52.0
HanXRQChr05g0161871 Helianthus annuus HOM05D001458 ORTHO05D007170 8.5e-15 85.1 75 52.0
HPP92_018596 Vanilla planifolia HOM05D001458 ORTHO05D007170 3.2e-14 83.2 213 29.6
AagrBONN_evm.TU.Sc2ySwM_368.1624 Anthoceros agrestis HOM05D001458 ORTHO05D007170 9.4e-14 81.6 309 24.3
Lalb_Chr04g0247901 Lupinus albus HOM05D001458 ORTHO05D007170 9.4e-14 81.6 81 46.9
Atru.chr2.3673 Acer truncatum HOM05D001458 ORTHO05D007170 2.7e-13 80.1 82 50.0
SMO307G0021 Selaginella moellendorffii HOM05D001458 ORTHO05D007170 1.8e-12 77.4 220 30.0
Nitab4.5_0003894g0060 Nicotiana tabacum HOM05D001458 ORTHO05D007170 3.9e-12 76.3 35 94.3
SMO239G0116 Selaginella moellendorffii HOM05D001458 ORTHO05D007170 6.7e-12 75.5 231 27.7
Sp3g11340 Schrenkiella parvula HOM05D001458 ORTHO05D007170 5.7e-11 72.4 67 55.2
MD03G1184400 Malus domestica HOM05D001458 ORTHO05D007170 3.7e-10 69.7 68 47.1
MD03G1184600 Malus domestica HOM05D001458 ORTHO05D007170 2.4e-09 67.0 35 77.1
MBI16_g22434_MAGBIO Magnolia biondii HOM05D001458 ORTHO05D000074 1.2e-08 64.7 34 82.4
Prupe.5G052600 Prunus persica HOM05D001458 ORTHO05D007170 1.5e-08 64.3 37 67.6
HPP92_018592 Vanilla planifolia HOM05D001458 ORTHO05D007170 1.7e-07 60.8 75 41.3
HPP92_006515 Vanilla planifolia HOM05D001458 ORTHO05D007170 2.9e-07 60.1 35 68.6
Gohir.A04G077200 Gossypium hirsutum HOM05D001458 ORTHO05D006787 4.2e-06 56.2 209 24.9
SMO307G0075 Selaginella moellendorffii HOM05D001458 ORTHO05D007170 4.2e-06 56.2 108 33.3


User provided reference genes

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