Gene: PGSC0003DMG401022175

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401022175
  • Transcript Identifier PGSC0003DMT400057069
  • Gene Type Coding gene
  • Location ST4.03ch07 : 55450183-55453825 : negative

Gene Family Information

  • ID HOM05D001458
  • #Genes/#Species 433/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37432949
  • id PGSC0003DMG401022175.v4.03
  • uniprot M1C0B8

Descriptions

  • Description Meiotic recombination protein spo11
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006259
IEA
GOA DatabaseDNA metabolic process
GO:0006259
IEA
InterProDNA metabolic process
GO:0034090
ISO
PLAZA Integrative Orthologymaintenance of meiotic sister chromatid cohesion AT3G13170
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination Os03g0752200
GO:0007131
IBA
IEA
GOA Databasereciprocal meiotic recombination
GO:0007129
IEA
GOA Databasehomologous chromosome pairing at meiosis
GO:0051026
IEA
GOA Databasechiasma assembly
GO:0000706
IBA
GOA Databasemeiotic DNA double-strand break processing
GO:0042138
IBA
IEA
GOA Databasemeiotic DNA double-strand break formation
GO:0042138
IEA
InterPromeiotic DNA double-strand break formation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G13170
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0003918
IEA
GOA DatabaseDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000228
IBA
GOA Databasenuclear chromosome
GO:0005694
IEA
GOA Databasechromosome
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR002815 Spo11/DNA topoisomerase VI subunit A
IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily
IPR013049 Spo11/DNA topoisomerase VI, subunit A, N-terminal
Mapman id Description
35.1 not assigned.annotated