Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G317.10 Capsicum annuum HOM05D003161 ORTHO05D015567 7.4e-62 240.4 121 100.0
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 4.4e-30 134.8 114 68.4
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 1.2e-11 73.6 40 82.5
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 4.6e-11 71.6 47 70.2
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 5.1e-10 68.2 42 71.4
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 8.6e-10 67.4 42 76.2
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 2.5e-09 65.9 43 67.4
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 4.3e-09 65.1 71 45.1
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 7.3e-09 64.3 41 65.9
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 1.2e-08 63.5 33 78.8
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 1.6e-08 63.2 42 61.9
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 2.1e-08 62.8 33 78.8
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 2.1e-08 62.8 40 62.5
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 2.1e-08 62.8 38 76.3
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 2.1e-08 62.8 40 62.5
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 2.1e-08 62.8 34 76.5
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 2.8e-08 62.4 36 72.2
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 3.6e-08 62.0 33 75.8
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 4.7e-08 61.6 41 63.4
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 4.7e-08 61.6 32 78.1
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 4.7e-08 61.6 42 61.9
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 4.7e-08 61.6 40 60.0
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 6.2e-08 61.2 33 75.8
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 6.2e-08 61.2 33 75.8
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 1.1e-07 60.5 33 75.8
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 2.3e-07 59.3 39 66.7
Psat7g030280 Pisum sativum HOM05D003161 ORTHO05D005173 2.3e-07 59.3 39 66.7
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 2.3e-07 59.3 33 72.7
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.1e-07 58.9 42 61.9
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 3.1e-07 58.9 33 72.7
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 4.0e-07 58.5 42 59.5
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 4.0e-07 58.5 33 72.7
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 5.2e-07 58.2 32 75.0
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 5.2e-07 58.2 33 69.7
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 5.2e-07 58.2 33 75.8
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 6.8e-07 57.8 33 69.7
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 6.8e-07 57.8 33 69.7
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 8.9e-07 57.4 33 69.7
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 8.9e-07 57.4 33 69.7
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.2e-06 57.0 33 72.7
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 1.2e-06 57.0 40 62.5
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.2e-06 57.0 33 69.7
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 1.2e-06 57.0 33 72.7
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.2e-06 57.0 33 69.7
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 1.5e-06 56.6 33 69.7
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 1.5e-06 56.6 33 72.7
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.5e-06 56.6 32 71.9
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 2.0e-06 56.2 31 74.2
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 2.0e-06 56.2 33 69.7
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 2.0e-06 56.2 33 69.7
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.4e-06 55.5 45 55.6
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 3.4e-06 55.5 33 66.7
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 3.4e-06 55.5 33 66.7
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 3.4e-06 55.5 31 71.0
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 3.4e-06 55.5 33 66.7
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 3.4e-06 55.5 31 71.0
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 5.8e-06 54.7 33 66.7
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 5.8e-06 54.7 31 71.0
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 5.8e-06 54.7 33 66.7
SHI30031 Sapria himalayana HOM05D003161 ORTHO05D005173 5.8e-06 54.7 39 64.1
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 5.8e-06 54.7 33 72.7
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 9.9e-06 53.9 47 51.1
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 9.9e-06 53.9 43 53.5
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 9.9e-06 53.9 44 54.5


User provided reference genes

Program Settings