Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G3.12 Capsicum annuum HOM05D006159 ORTHO05D007624 7.4e-52 206.8 98 100.0
Sopen09g019910 Solanum pennellii HOM05D006159 ORTHO05D007624 7.4e-20 100.5 50 92.0
Nitab4.5_0005248g0030 Nicotiana tabacum HOM05D006159 ORTHO05D007624 4.8e-19 97.8 50 88.0
Peaxi162Scf00095g10135 Petunia axillaris HOM05D006159 ORTHO05D007624 4.8e-19 97.8 50 90.0
Duzib168G0394 Durio zibethinus HOM05D006159 ORTHO05D007624 2.6e-17 92.0 50 84.0
Gohir.A03G024400 Gossypium hirsutum HOM05D006159 ORTHO05D007624 2.6e-17 92.0 50 82.0
Gohir.D03G144100 Gossypium hirsutum HOM05D006159 ORTHO05D007624 3.5e-17 91.7 50 82.0
Gorai.003G151400 Gossypium raimondii HOM05D006159 ORTHO05D007624 3.5e-17 91.7 50 82.0
COL.COLO4_11182 Corchorus olitorius HOM05D006159 ORTHO05D007624 4.5e-17 91.3 50 82.0
Thecc.09G360700 Theobroma cacao HOM05D006159 ORTHO05D007624 1.3e-16 89.7 50 80.0
TAR633G1181 Trochodendron aralioides HOM05D006159 ORTHO05D007624 2.9e-16 88.6 50 76.0
Actinidia23185 Actinidia chinensis HOM05D006159 ORTHO05D007624 8.5e-16 87.0 50 78.0
CSS0020536 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 1.9e-15 85.9 50 78.0
CSS0033482 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 1.9e-15 85.9 50 78.0
Cc01_g15060 Coffea canephora HOM05D006159 ORTHO05D007624 1.9e-15 85.9 50 80.0
Rhsim01G0241600 Rhododendron simsii HOM05D006159 ORTHO05D007624 9.4e-15 83.6 50 72.0
Actinidia34484 Actinidia chinensis HOM05D006159 ORTHO05D007624 1.2e-14 83.2 50 74.0
Lalb_Chr17g0345491 Lupinus albus HOM05D006159 ORTHO05D007624 1.6e-14 82.8 50 66.0
GSVIVG01024604001 Vitis vinifera HOM05D006159 ORTHO05D007624 1.6e-14 82.8 50 76.0
Zm00001eb016190 Zea mays HOM05D006159 ORTHO05D007624 1.6e-14 82.8 50 70.0
Dinv28707 Davidia involucrata HOM05D006159 ORTHO05D007624 2.1e-14 82.4 50 74.0
Rhsim13G0062400 Rhododendron simsii HOM05D006159 ORTHO05D007624 2.1e-14 82.4 50 74.0
Sp4g12880 Schrenkiella parvula HOM05D006159 ORTHO05D007624 2.1e-14 82.4 50 70.0
vmacro14626 Vaccinium macrocarpon HOM05D006159 ORTHO05D007624 2.1e-14 82.4 50 72.0
QL01p025515 Quercus lobata HOM05D006159 ORTHO05D007624 2.7e-14 82.0 50 72.0
arahy.Tifrunner.gnm1.ann1.3A3S4A Arachis hypogaea HOM05D006159 ORTHO05D007624 3.6e-14 81.6 50 72.0
arahy.Tifrunner.gnm1.ann1.C311ZQ Arachis hypogaea HOM05D006159 ORTHO05D007624 3.6e-14 81.6 50 72.0
Carub.0004s1147 Capsella rubella HOM05D006159 ORTHO05D007624 3.6e-14 81.6 50 70.0
CANSAT54G0267 Cannabis sativa HOM05D006159 ORTHO05D007624 4.7e-14 81.3 50 74.0
Hma1.2p1_1586F.1_g292125 Hydrangea macrophylla HOM05D006159 ORTHO05D007624 4.7e-14 81.3 50 74.0
Lj2A1097G33 Lonicera japonica HOM05D006159 ORTHO05D007624 4.7e-14 81.3 50 74.0
Os03g0338600 Oryza sativa ssp. japonica HOM05D006159 ORTHO05D007624 4.7e-14 81.3 50 66.0
ECA247G0586 Erigeron canadensis HOM05D006159 ORTHO05D007624 6.1e-14 80.9 50 74.0
PSO017G5079 Papaver somniferum HOM05D006159 ORTHO05D007624 6.1e-14 80.9 50 74.0
SalBow2G3538 Salvia bowleyana HOM05D006159 ORTHO05D007624 6.1e-14 80.9 50 74.0
Ah.15g096550 Amaranthus hybridus HOM05D006159 ORTHO05D007624 8.0e-14 80.5 50 72.0
Haze_24438 Corylus avellana HOM05D006159 ORTHO05D007624 8.0e-14 80.5 50 72.0
Lsat_1_v5_gn_9_14440 Lactuca sativa HOM05D006159 ORTHO05D007624 8.0e-14 80.5 50 72.0
PSO170G6759 Papaver somniferum HOM05D006159 ORTHO05D007624 8.0e-14 80.5 50 76.0
TWI31G0474 Tripterygium wilfordii HOM05D006159 ORTHO05D007624 8.0e-14 80.5 49 75.5
Aa31LG5G6390 Aethionema arabicum HOM05D006159 ORTHO05D007624 1.0e-13 80.1 50 68.0
LjContig00141g0000315 Lotus japonicus HOM05D006159 ORTHO05D007624 1.0e-13 80.1 50 72.0
Lalb_Chr10g0103671 Lupinus albus HOM05D006159 ORTHO05D007624 1.0e-13 80.1 50 68.0
AL4G25180 Arabidopsis lyrata HOM05D006159 ORTHO05D007624 1.4e-13 79.7 50 68.0
AT2G30320 Arabidopsis thaliana HOM05D006159 ORTHO05D007624 1.4e-13 79.7 50 68.0
SGA_v2.0_scaffold5G02753 Striga asiatica HOM05D006159 ORTHO05D007624 1.4e-13 79.7 50 72.0
vmacro02902 Vaccinium macrocarpon HOM05D006159 ORTHO05D007624 1.4e-13 79.7 50 72.0
A03p16930 Brassica napus HOM05D006159 ORTHO05D007624 1.8e-13 79.3 50 66.0
Sc12g0000200 Simmondsia chinensis HOM05D006159 ORTHO05D007624 1.8e-13 79.3 50 72.0
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.8e-13 79.3 54 66.7
BcaC01g05985 Brassica carinata HOM05D006159 ORTHO05D007624 2.3e-13 79.0 50 66.0
C03p19940 Brassica napus HOM05D006159 ORTHO05D007624 2.3e-13 79.0 50 66.0
BolC3t14372H Brassica oleracea HOM05D006159 ORTHO05D007624 2.3e-13 79.0 50 66.0
DCAR_012721 Daucus carota HOM05D006159 ORTHO05D007624 2.3e-13 79.0 50 70.0
ECA247G2911 Erigeron canadensis HOM05D006159 ORTHO05D007624 2.3e-13 79.0 50 72.0
Thhalv10016529m.g Eutrema salsugineum HOM05D006159 ORTHO05D007624 2.3e-13 79.0 50 66.0
Migut.N00748 Erythranthe guttata HOM05D006159 ORTHO05D007624 3.0e-13 78.6 50 70.0
Aqoxy4G02147 Aquilegia oxysepala HOM05D006159 ORTHO05D007624 4.0e-13 78.2 50 70.0
CARHR123640 Cardamine hirsuta HOM05D006159 ORTHO05D007624 4.0e-13 78.2 50 66.0
MSTRG.17900 Avicennia marina HOM05D006159 ORTHO05D007624 5.2e-13 77.8 50 72.0
Ca_27536_v3 Cicer arietinum L. HOM05D006159 ORTHO05D007624 5.2e-13 77.8 63 61.9
Nn2g11083 Nelumbo nucifera HOM05D006159 ORTHO05D007624 5.2e-13 77.8 46 73.9
EL10Ac7g15868 Beta vulgaris HOM05D006159 ORTHO05D007624 6.8e-13 77.4 50 68.0
MELO3C020498.2 Cucumis melo HOM05D006159 ORTHO05D007624 6.8e-13 77.4 50 70.0
HanXRQChr08g0228561 Helianthus annuus HOM05D006159 ORTHO05D007624 6.8e-13 77.4 50 70.0
CsaV3_1G036700 Cucumis sativus L. HOM05D006159 ORTHO05D007624 8.8e-13 77.0 50 70.0
Eucgr.J03050 Eucalyptus grandis HOM05D006159 ORTHO05D007624 8.8e-13 77.0 50 70.0
RcHm_v2.0_Chr5g0072261 Rosa chinensis HOM05D006159 ORTHO05D007624 8.8e-13 77.0 50 66.0
CiPaw.13G066700 Carya illinoinensis HOM05D006159 ORTHO05D007624 1.2e-12 76.6 50 68.0
CiPaw.14G053000 Carya illinoinensis HOM05D006159 ORTHO05D007624 1.5e-12 76.3 50 68.0
ClCG03G000200 Citrullus lanatus HOM05D006159 ORTHO05D007624 1.5e-12 76.3 50 70.0
MD11G1060800 Malus domestica HOM05D006159 ORTHO05D007624 1.5e-12 76.3 50 70.0
PGR031G1374 Punica granatum HOM05D006159 ORTHO05D007624 1.5e-12 76.3 49 73.5
Manes.18G138800 Manihot esculenta HOM05D006159 ORTHO05D007624 2.0e-12 75.9 50 66.0
Sed0023817 Sechium edule HOM05D006159 ORTHO05D007624 2.0e-12 75.9 50 72.0
Actinidia23852 Actinidia chinensis HOM05D006159 ORTHO05D007624 2.6e-12 75.5 52 67.3
AUR62009718 Chenopodium quinoa HOM05D006159 ORTHO05D007624 2.6e-12 75.5 50 68.0
FAN25G2364 Fragaria x ananassa HOM05D006159 ORTHO05D007624 3.4e-12 75.1 50 66.0
Psat2g052720 Pisum sativum HOM05D006159 ORTHO05D007624 3.4e-12 75.1 50 68.0
THA.LOC104800779 Tarenaya hassleriana HOM05D006159 ORTHO05D007624 3.4e-12 75.1 50 64.0
FvH4_3g40070 Fragaria vesca HOM05D006159 ORTHO05D007624 4.4e-12 74.7 50 66.0
FAN11G2758 Fragaria x ananassa HOM05D006159 ORTHO05D007624 4.4e-12 74.7 50 66.0
FAN16G1196 Fragaria x ananassa HOM05D006159 ORTHO05D007624 4.4e-12 74.7 50 66.0
FAN21G3656 Fragaria x ananassa HOM05D006159 ORTHO05D007624 4.4e-12 74.7 50 66.0
AUR62036228 Chenopodium quinoa HOM05D006159 ORTHO05D007624 5.7e-12 74.3 50 66.0
TPR.G27345 Trifolium pratense HOM05D006159 ORTHO05D007624 5.7e-12 74.3 50 64.0
Atru.chr1.2561 Acer truncatum HOM05D006159 ORTHO05D007624 9.8e-12 73.6 49 69.4
Psat0s1662g0080 Pisum sativum HOM05D006159 ORTHO05D007624 9.8e-12 73.6 50 64.0
Glyma.02G233500 Glycine max HOM05D006159 ORTHO05D007624 1.3e-11 73.2 50 68.0
SMO367G0138 Selaginella moellendorffii HOM05D006159 ORTHO05D007624 1.3e-11 73.2 50 62.0
TPR.G27348 Trifolium pratense HOM05D006159 ORTHO05D007624 1.3e-11 73.2 50 66.0
VMungo0647G0641 Vigna mungo HOM05D006159 ORTHO05D007624 1.3e-11 73.2 50 66.0
Medtr5g074620 Medicago truncatula HOM05D006159 ORTHO05D007624 1.7e-11 72.8 61 57.4
HPP92_011991 Vanilla planifolia HOM05D006159 ORTHO05D007624 1.7e-11 72.8 49 67.3
ATR1127G103 Amborella trichopoda HOM05D006159 ORTHO05D007624 2.2e-11 72.4 44 68.2
VMungo0647G1827 Vigna mungo HOM05D006159 ORTHO05D007624 2.2e-11 72.4 50 68.0
Phvul.008G250200 Phaseolus vulgaris HOM05D006159 ORTHO05D007624 2.8e-11 72.0 50 68.0
Glyma.02G233600 Glycine max HOM05D006159 ORTHO05D007624 3.7e-11 71.6 50 68.0
arahy.Tifrunner.gnm1.ann1.9T2ABX Arachis hypogaea HOM05D006159 ORTHO05D007624 4.8e-11 71.2 50 62.0
Glyma.U039500 Glycine max HOM05D006159 ORTHO05D007624 4.8e-11 71.2 50 64.0
Phvul.008G250100 Phaseolus vulgaris HOM05D006159 ORTHO05D007624 4.8e-11 71.2 50 66.0
arahy.Tifrunner.gnm1.ann1.N5JXUH Arachis hypogaea HOM05D006159 ORTHO05D007624 6.3e-11 70.9 50 62.0
Ca_05688_v3 Cicer arietinum L. HOM05D006159 ORTHO05D007624 8.3e-11 70.5 50 64.0
Medtr5g074640 Medicago truncatula HOM05D006159 ORTHO05D007624 8.3e-11 70.5 50 62.0
LjContig00141g0002443 Lotus japonicus HOM05D006159 ORTHO05D007624 1.4e-10 69.7 50 66.0
Potri.013G154200 Populus trichocarpa HOM05D006159 ORTHO05D007624 2.4e-10 68.9 50 62.0
Sabra13G0124000 Salix brachista HOM05D006159 ORTHO05D007624 2.4e-10 68.9 50 62.0
Prupe.6G045100 Prunus persica HOM05D006159 ORTHO05D007624 1.3e-08 63.2 44 63.6
Mapoly0146s0022 Marchantia polymorpha HOM05D006159 ORTHO05D007624 2.2e-08 62.4 61 45.9
Pp3c2_21310 Physcomitrium patens HOM05D006159 ORTHO05D007624 1.5e-07 59.7 58 50.0
SMO134G0068 Selaginella moellendorffii HOM05D006159 ORTHO05D007624 1.2e-06 56.6 50 42.0
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 6.1e-06 54.3 43 62.8


User provided reference genes

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