Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G273.4 Capsicum annuum HOM05D003093 ORTHO05D018860 4.3e-127 458.4 299 100.0
CAN.G97.8 Capsicum annuum HOM05D003093 ORTHO05D018860 2.7e-44 183.3 355 38.9
CAN.G348.4 Capsicum annuum HOM05D003093 ORTHO05D004301 3.1e-32 143.3 420 38.8
CAN.G1402.11 Capsicum annuum HOM05D003093 ORTHO05D018860 2.2e-30 137.1 354 33.1
CAN.G255.5 Capsicum annuum HOM05D000018 ORTHO05D005005 1.6e-12 77.8 48 77.1
CAN.G23.3 Capsicum annuum HOM05D003093 ORTHO05D115833 4.6e-12 76.3 44 81.8
CAN.G997.8 Capsicum annuum HOM05D003093 ORTHO05D115019 3.9e-11 73.2 47 78.7
CAN.G1076.11 Capsicum annuum HOM05D003093 ORTHO05D018860 8.7e-11 72.0 43 81.4
CAN.G28.18 Capsicum annuum HOM05D003093 ORTHO05D004301 8.7e-11 72.0 41 85.4
CAN.G546.16 Capsicum annuum HOM05D003093 ORTHO05D004301 4.3e-10 69.7 40 85.0
Peaxi162Scf00015g02612 Petunia axillaris HOM05D003093 ORTHO05D004301 5.6e-10 69.3 41 82.9
Nitab4.5_0022203g0010 Nicotiana tabacum HOM05D003093 ORTHO05D004301 7.3e-10 68.9 40 85.0
Sopen06g008290 Solanum pennellii HOM05D003093 ORTHO05D004301 9.6e-10 68.6 41 82.9
PGSC0003DMG400002376 Solanum tuberosum HOM05D003093 ORTHO05D004301 9.6e-10 68.6 41 82.9
Solyc06g036580.4 Solanum lycopersicum HOM05D003093 ORTHO05D004301 6.2e-09 65.9 41 80.5
SalBow3G0936 Salvia bowleyana HOM05D003093 ORTHO05D004301 1.1e-08 65.1 41 75.6
Solyc05g054880.3 Solanum lycopersicum HOM05D003093 ORTHO05D004301 1.4e-08 64.7 40 80.0
Sopen05g033340 Solanum pennellii HOM05D003093 ORTHO05D004301 1.4e-08 64.7 40 80.0
SalBow8G1202 Salvia bowleyana HOM05D003093 ORTHO05D004301 1.8e-08 64.3 41 75.6
PGSC0003DMG400023507 Solanum tuberosum HOM05D003093 ORTHO05D004301 2.4e-08 63.9 41 75.6
Atru.chr12.590 Acer truncatum HOM05D003093 ORTHO05D004301 9.0e-08 62.0 41 80.5
Ciclev10030694m.g Citrus clementina HOM05D003093 ORTHO05D004301 9.0e-08 62.0 41 70.7
Rhsim03G0125400 Rhododendron simsii HOM05D003093 ORTHO05D004301 9.0e-08 62.0 101 41.6
CAN.G402.5 Capsicum annuum HOM05D003093 ORTHO05D018860 1.2e-07 61.6 51 72.5
Oeu009485.1 Olea europaea HOM05D003093 ORTHO05D004301 1.5e-07 61.2 87 46.0
CSS0040311 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 2.0e-07 60.8 101 41.6
CSS0050146 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 2.0e-07 60.8 101 41.6
unitig_32.g10676 Utricularia gibba HOM05D003093 ORTHO05D004301 2.0e-07 60.8 40 70.0
CAN.G135.76 Capsicum annuum HOM05D000001 ORTHO05D000003 2.6e-07 60.5 43 72.1
TWI38G0009 Tripterygium wilfordii HOM05D003093 ORTHO05D004301 2.6e-07 60.5 41 68.3
Actinidia38222 Actinidia chinensis HOM05D003093 ORTHO05D004301 3.4e-07 60.1 101 40.6
Oeu039037.3 Olea europaea HOM05D003093 ORTHO05D004301 4.4e-07 59.7 38 78.9
Eucgr.G02772 Eucalyptus grandis HOM05D003093 ORTHO05D004301 5.8e-07 59.3 41 68.3
Medtr1g115920 Medicago truncatula HOM05D003093 ORTHO05D004301 5.8e-07 59.3 42 71.4
SGA_v2.0_scaffold2G01039 Striga asiatica HOM05D003093 ORTHO05D004301 5.8e-07 59.3 41 68.3
CiPaw.02G178700 Carya illinoinensis HOM05D003093 ORTHO05D004301 7.6e-07 58.9 41 65.9
Migut.F00813 Erythranthe guttata HOM05D003093 ORTHO05D004301 7.6e-07 58.9 70 52.9
Gohir.D10G218100 Gossypium hirsutum HOM05D003093 ORTHO05D004301 7.6e-07 58.9 41 70.7
Os09g0249600 Oryza sativa ssp. japonica HOM05D003093 ORTHO05D004301 7.6e-07 58.9 40 72.5
QL08p057653 Quercus lobata HOM05D003093 ORTHO05D004301 7.6e-07 58.9 40 67.5
Thecc.10G062100 Theobroma cacao HOM05D003093 ORTHO05D004301 7.6e-07 58.9 70 51.4
Actinidia02998 Actinidia chinensis HOM05D003093 ORTHO05D004301 9.9e-07 58.5 84 41.7
Dinv31391 Davidia involucrata HOM05D003093 ORTHO05D004301 9.9e-07 58.5 39 74.4
Hma1.2p1_0207F.1_g087910 Hydrangea macrophylla HOM05D003093 ORTHO05D004301 9.9e-07 58.5 101 39.6
Psat6g240760 Pisum sativum HOM05D003093 ORTHO05D004301 9.9e-07 58.5 42 71.4
Ah.10g033320 Amaranthus hybridus HOM05D003093 ORTHO05D004301 1.3e-06 58.2 39 74.4
Sc06g0001860 Simmondsia chinensis HOM05D003093 ORTHO05D004301 1.3e-06 58.2 42 71.4
GSVIVG01032624001 Vitis vinifera HOM05D003093 ORTHO05D004301 1.3e-06 58.2 40 70.0
Nn2g10548 Nelumbo nucifera HOM05D003093 ORTHO05D004301 1.7e-06 57.8 41 68.3
Sabra10G0165100 Salix brachista HOM05D003093 ORTHO05D004301 1.7e-06 57.8 67 55.2
PGR142G0268 Punica granatum HOM05D003093 ORTHO05D004301 2.2e-06 57.4 41 73.2
ATR0580G275 Amborella trichopoda HOM05D003093 ORTHO05D004301 2.9e-06 57.0 40 67.5
CAN.G28.19 Capsicum annuum HOM05D003093 ORTHO05D018860 2.9e-06 57.0 32 84.4
MELO3C023809.2 Cucumis melo HOM05D003093 ORTHO05D004301 2.9e-06 57.0 41 63.4
Duzib114G0987 Durio zibethinus HOM05D003093 ORTHO05D004301 2.9e-06 57.0 55 58.2
CAN.G591.2 Capsicum annuum HOM05D160147 ORTHO05D115708 3.8e-06 56.6 152 30.3
Duzib128G1511 Durio zibethinus HOM05D003093 ORTHO05D004301 3.8e-06 56.6 40 65.0
Manes.07G106800 Manihot esculenta HOM05D003093 ORTHO05D004301 3.8e-06 56.6 56 57.1
Manes.10G038800 Manihot esculenta HOM05D003093 ORTHO05D004301 3.8e-06 56.6 41 65.9
EL10Ac2g03490 Beta vulgaris HOM05D003093 ORTHO05D004301 4.9e-06 56.2 39 71.8
Cfa001556 Carpinus fangiana HOM05D003093 ORTHO05D004301 4.9e-06 56.2 41 61.0
Cc02_g08600 Coffea canephora HOM05D003093 ORTHO05D004301 4.9e-06 56.2 102 41.2
Haze_16975 Corylus avellana HOM05D003093 ORTHO05D004301 4.9e-06 56.2 41 61.0
Duzib114G0430 Durio zibethinus HOM05D003093 ORTHO05D004301 4.9e-06 56.2 55 56.4
Medtr4g094355 Medicago truncatula HOM05D003093 ORTHO05D004301 4.9e-06 56.2 42 69.0
Hund22428 Selenicereus undatus HOM05D003093 ORTHO05D004301 4.9e-06 56.2 41 65.9
CiPaw.01G280100 Carya illinoinensis HOM05D003093 ORTHO05D004301 6.4e-06 55.8 39 66.7
Glyma.01G229700 Glycine max HOM05D003093 ORTHO05D004301 6.4e-06 55.8 42 66.7
Gohir.A06G177800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 6.4e-06 55.8 40 67.5
Gorai.010G203000 Gossypium raimondii HOM05D003093 ORTHO05D004301 6.4e-06 55.8 40 67.5
Lj1A929G70 Lonicera japonica HOM05D003093 ORTHO05D004301 6.4e-06 55.8 38 71.1
Phvul.007G008300 Phaseolus vulgaris HOM05D003093 ORTHO05D004301 6.4e-06 55.8 42 66.7
Potri.008G048000 Populus trichocarpa HOM05D003093 ORTHO05D004301 6.4e-06 55.8 68 50.0
SGA_v2.0_scaffold221G42698 Striga asiatica HOM05D003093 ORTHO05D004301 6.4e-06 55.8 38 68.4
CAN.G829.6 Capsicum annuum HOM05D003093 ORTHO05D114979 8.4e-06 55.5 32 84.4
ClCG02G013660 Citrullus lanatus HOM05D003093 ORTHO05D004301 8.4e-06 55.5 38 68.4
ECA233G1939 Erigeron canadensis HOM05D003093 ORTHO05D004301 8.4e-06 55.5 41 65.9
Gohir.A10G209800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 8.4e-06 55.5 39 71.8
Gohir.D06G173600 Gossypium hirsutum HOM05D003093 ORTHO05D004301 8.4e-06 55.5 40 65.0
Gorai.011G244700 Gossypium raimondii HOM05D003093 ORTHO05D004301 8.4e-06 55.5 39 71.8
Potri.010G213300 Populus trichocarpa HOM05D003093 ORTHO05D004301 8.4e-06 55.5 68 51.5
SEGI_10080 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 8.4e-06 55.5 41 68.3
SEGI_11595 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 8.4e-06 55.5 41 68.3
SEGI_36215 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 8.4e-06 55.5 41 68.3


User provided reference genes

Program Settings