Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2141.5 Capsicum annuum HOM05D000216 ORTHO05D000634 5.3e-89 330.9 153 100.0
CAN.G481.11 Capsicum annuum HOM05D000216 ORTHO05D000634 5.3e-89 330.9 153 100.0
Nn082s42673 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.9e-86 322.4 153 97.4
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.6e-85 319.3 151 96.7
Gorai.005G167700 Gossypium raimondii HOM05D000216 ORTHO05D001131 6.1e-85 317.4 153 95.4
CAN.G219.18 Capsicum annuum HOM05D000216 ORTHO05D000634 1.8e-84 315.8 151 96.0
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 5.1e-84 314.3 151 94.7
PGR111G0082 Punica granatum HOM05D000216 ORTHO05D000634 8.7e-84 313.5 144 99.3
ATCG00180 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 5.7e-83 310.8 144 97.9
LjContig00318g0019842 Lotus japonicus HOM05D000216 ORTHO05D000634 1.3e-82 309.7 145 96.6
PSO548G0054 Papaver somniferum HOM05D000216 ORTHO05D000634 1.3e-82 309.7 144 97.2
Potri.013G140850 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.6e-82 309.3 144 97.2
Atru.chr13.1918 Acer truncatum HOM05D000216 ORTHO05D000634 2.8e-82 308.5 146 95.9
DCAR_032475 Daucus carota HOM05D000216 ORTHO05D000634 2.8e-82 308.5 151 94.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 4.8e-82 307.8 141 99.3
MELO3C027102.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.4e-81 306.2 145 96.6
BolSC37t60766H Brassica oleracea HOM05D000216 ORTHO05D000634 3.1e-81 305.1 145 95.9
BolSC45t60875H Brassica oleracea HOM05D000216 ORTHO05D000634 3.1e-81 305.1 145 95.9
BolSC45t60939H Brassica oleracea HOM05D000216 ORTHO05D000634 3.1e-81 305.1 145 95.9
BraSC140t45586Z Brassica rapa HOM05D000216 ORTHO05D000634 3.1e-81 305.1 145 95.9
BraSC58t46407Z Brassica rapa HOM05D000216 ORTHO05D000634 3.1e-81 305.1 145 95.9
Sed0024913 Sechium edule HOM05D000216 ORTHO05D000634 4.1e-81 304.7 144 96.5
Sed0025165 Sechium edule HOM05D000216 ORTHO05D000634 4.1e-81 304.7 144 96.5
BNapus_Darmor_BZH_scaffold_253p00070 Brassica napus HOM05D000216 ORTHO05D000634 9.0e-81 303.5 144 95.8
Medtr3g062770 Medicago truncatula HOM05D000216 ORTHO05D000634 7.7e-80 300.4 145 93.1
Medtr3g062790 Medicago truncatula HOM05D000216 ORTHO05D000634 7.7e-80 300.4 145 93.1
arahy.Tifrunner.gnm1.ann1.YJD706 Arachis hypogaea HOM05D000216 ORTHO05D000634 5.0e-79 297.7 146 93.2
HanXRQChr13g0417241 Helianthus annuus HOM05D000216 ORTHO05D001131 6.5e-79 297.4 152 90.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 8.5e-79 297.0 152 89.5
Lalb_Chr09g0335401 Lupinus albus HOM05D000216 ORTHO05D000634 1.9e-78 295.8 146 92.5
HanXRQChr00c0823g0577611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-78 295.4 150 90.7
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-78 295.4 150 90.7
Hund27655 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-78 295.4 144 91.7
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-78 295.4 144 91.7
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 5.5e-78 294.3 149 89.3
RcHm_v2.0_Chr2g0102161 Rosa chinensis HOM05D000216 ORTHO05D000634 9.4e-78 293.5 145 93.1
Psat7g026840 Pisum sativum HOM05D000216 ORTHO05D001131 7.9e-77 290.4 150 88.7
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-76 290.0 149 88.6
Lsat_1_v5_gn_1_96161 Lactuca sativa HOM05D000216 ORTHO05D000634 5.1e-76 287.7 145 90.3
Lsat_1_v5_gn_8_1820 Lactuca sativa HOM05D000216 ORTHO05D000634 5.1e-76 287.7 145 90.3
Sed0020606 Sechium edule HOM05D000216 ORTHO05D000634 8.8e-76 287.0 140 93.6
BraSC140t45599Z Brassica rapa HOM05D000216 ORTHO05D000634 3.7e-74 281.6 135 94.8
CSS0028306 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 6.5e-71 270.8 148 85.8
Lalb_Chr24g0400921 Lupinus albus HOM05D000216 ORTHO05D000634 9.7e-67 256.9 146 84.2
LjContig00489g0016986 Lotus japonicus HOM05D000216 ORTHO05D000634 3.7e-66 255.0 145 84.8
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 4.0e-60 235.0 130 81.5
Lsat_1_v5_gn_1_118640 Lactuca sativa HOM05D000216 ORTHO05D000634 2.6e-59 232.3 113 92.9
Oeu062866.1 Olea europaea HOM05D000216 ORTHO05D000634 3.5e-56 221.9 106 96.2
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 3.6e-53 211.8 105 91.4
Migut.D01343 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.1e-46 190.3 128 71.9
BraSC151t45702Z Brassica rapa HOM05D000216 ORTHO05D000634 3.6e-45 185.3 90 92.2
Solyc12g035870.3 Solanum lycopersicum HOM05D000216 ORTHO05D001131 8.8e-44 180.6 94 83.0
arahy.Tifrunner.gnm1.ann1.F4653T Arachis hypogaea HOM05D000216 ORTHO05D000634 2.6e-43 179.1 97 84.5
ATR0227G001 Amborella trichopoda HOM05D000216 ORTHO05D001131 7.5e-43 177.6 93 87.1
Solyc01g017370.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.4e-41 172.6 95 81.1
SMO168G0002 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 1.2e-37 160.2 148 52.0
HanXRQChr00c0994g0578191 Helianthus annuus HOM05D000216 ORTHO05D000634 1.4e-36 156.8 75 93.3
Gohir.D13G173125 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.3e-36 156.0 80 86.2
Gorai.004G101400 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.2e-35 153.7 77 93.5
Potri.019G027860 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.0e-35 152.9 71 97.2
GSVIVG01000405001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.1e-33 147.1 72 90.3
SMO086G0006 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 1.4e-33 146.7 164 45.7
Gohir.D08G095620 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.4e-33 146.0 77 89.6
BolSC44t60848H Brassica oleracea HOM05D000216 ORTHO05D000634 2.3e-31 139.4 66 93.9
Gorai.009G384300 Gossypium raimondii HOM05D000216 ORTHO05D000634 8.6e-31 137.5 79 78.5
arahy.Tifrunner.gnm1.ann1.ITK2CB Arachis hypogaea HOM05D000388 ORTHO05D000473 1.5e-30 136.7 69 87.0
Gorai.013G187400 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.0e-28 130.6 65 87.7
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.8e-28 129.8 69 84.1
CARHR181340 Cardamine hirsuta HOM05D000216 ORTHO05D000634 8.9e-28 127.5 66 83.3
Nitab4.5_0000172g0250 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.5e-27 126.7 74 81.1
Mapoly0093s0044 Marchantia polymorpha HOM05D000216 ORTHO05D000634 1.4e-25 120.2 77 71.4
C02p28760 Brassica napus HOM05D000216 ORTHO05D000634 3.2e-25 119.0 62 80.6
Migut.K00995 Erythranthe guttata HOM05D000216 ORTHO05D000634 7.0e-25 117.9 65 83.1
FAN17G2339 Fragaria x ananassa HOM05D000216 ORTHO05D000634 9.2e-25 117.5 54 100.0
Mapoly0093s0045 Marchantia polymorpha HOM05D000216 ORTHO05D000634 9.2e-25 117.5 76 69.7
Migut.D01416 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.2e-24 117.1 57 89.5
Pp3c19_12990 Physcomitrium patens HOM05D000216 ORTHO05D000634 1.9e-22 109.8 82 64.6
Gorai.008G192200 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.4e-19 98.6 56 78.6
Gohir.D12G179260 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-17 94.0 61 70.5
BolC7t41733H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-17 93.2 42 97.6
BolSC49t61197H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-17 93.2 42 97.6
Oeu054668.1 Olea europaea HOM05D000445 ORTHO05D000634 7.1e-17 91.3 42 90.5
HanXRQChr10g0282571 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-16 89.4 50 84.0
Solyc12g062560.1 Solanum lycopersicum HOM05D001133 ORTHO05D000941 1.3e-15 87.0 89 48.3
Medtr8g018880 Medicago truncatula HOM05D000216 ORTHO05D000634 3.0e-15 85.9 50 76.0
Hund21335 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.3e-14 82.4 41 87.8
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.6e-13 79.0 39 94.9
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.6e-13 79.0 39 94.9
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.6e-13 79.0 39 94.9
Solyc07g021200.1 Solanum lycopersicum HOM05D001133 ORTHO05D000941 1.1e-12 77.4 41 80.5
Solyc12g062563.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.1e-12 75.9 42 78.6
Solyc07g021205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.6e-11 71.2 41 70.7
HanXRQChr00c0994g0578181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.0e-07 60.8 29 89.7


User provided reference genes

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