Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 2.6e-192 675.2 344 100.0
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 2.2e-143 512.7 373 74.8
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 3.7e-130 468.8 377 68.2
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 4.6e-125 451.8 361 68.7
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 2.1e-122 443.0 377 65.3
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 9.1e-105 384.4 369 61.2
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 1.3e-95 354.0 366 54.9
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 1.5e-94 350.5 374 55.1
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.9e-94 350.1 388 51.3
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 3.2e-94 349.4 368 56.0
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 4.2e-94 349.0 391 51.9
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 7.2e-94 348.2 372 54.6
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 1.6e-93 347.1 370 56.2
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.6e-93 347.1 372 53.8
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.7e-93 346.3 366 54.6
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.0e-92 344.4 380 52.9
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.0e-92 344.4 343 55.7
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 1.8e-92 343.6 305 63.0
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 2.3e-92 343.2 380 52.9
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.7e-92 341.7 380 52.6
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 6.7e-92 341.7 338 58.3
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 8.8e-92 341.3 355 56.1
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 2.0e-91 340.1 379 52.5
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 2.0e-91 340.1 373 53.4
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 2.6e-91 339.7 345 54.5
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 7.5e-91 338.2 369 53.7
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 2.8e-90 336.3 370 53.5
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 3.7e-90 335.9 373 53.9
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 4.8e-90 335.5 396 53.5
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.4e-89 334.0 356 53.7
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 2.4e-89 333.2 365 54.0
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 3.1e-89 332.8 341 55.4
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 3.1e-89 332.8 332 56.0
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 9.1e-89 331.3 337 55.8
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 9.1e-89 331.3 371 53.1
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 9.1e-89 331.3 377 51.5
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 2.7e-88 329.7 365 52.9
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 4.5e-88 328.9 382 50.8
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 7.7e-88 328.2 335 54.3
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 1.0e-87 327.8 356 52.0
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 2.2e-87 326.6 380 52.4
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 3.8e-87 325.9 352 53.4
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 3.8e-87 325.9 417 48.0
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 8.5e-87 324.7 370 51.9
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 1.9e-86 323.6 357 51.5
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 3.2e-86 322.8 365 50.1
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 4.2e-86 322.4 368 50.3
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 5.5e-86 322.0 351 53.3
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 1.2e-85 320.9 376 51.3
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 2.1e-85 320.1 369 51.2
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 3.6e-85 319.3 389 50.6
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.8e-84 317.0 354 50.8
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 3.0e-84 316.2 376 51.3
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 5.2e-84 315.5 319 54.2
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 8.8e-84 314.7 339 53.7
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 1.2e-83 314.3 359 51.8
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 2.0e-83 313.5 368 48.9
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 4.4e-83 312.4 367 51.8
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 7.5e-83 311.6 309 56.0
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.7e-82 310.5 396 49.2
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 2.2e-82 310.1 329 51.4
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 1.1e-81 307.8 376 49.2
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 2.4e-81 306.6 372 51.3
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 2.4e-81 306.6 368 49.7
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.4e-81 306.6 351 51.9
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 4.1e-81 305.8 371 50.7
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 9.1e-81 304.7 358 51.7
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 4.5e-80 302.4 376 51.3
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 7.7e-80 301.6 360 51.1
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 7.7e-80 301.6 358 51.4
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 7.7e-80 301.6 315 53.0
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 1.0e-79 301.2 359 51.8
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 1.3e-79 300.8 342 52.0
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 2.2e-79 300.1 349 50.4
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 6.5e-79 298.5 359 51.0
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 8.5e-79 298.1 342 51.5
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 8.5e-79 298.1 321 52.6
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 1.5e-78 297.4 359 51.3
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 3.2e-78 296.2 349 48.4
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 7.2e-78 295.0 357 50.7
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 2.7e-77 293.1 357 50.4
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 2.6e-75 286.6 365 48.2
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 8.3e-74 281.6 356 47.8
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 5.0e-71 272.3 362 45.9
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 3.6e-69 266.2 268 55.2
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.6e-67 260.0 349 45.3
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 1.3e-66 257.7 354 43.5
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.7e-66 257.3 352 44.0
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.7e-66 257.3 352 44.0
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 3.2e-65 253.1 363 44.4
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 9.2e-65 251.5 215 61.9
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.3e-63 247.7 252 55.2
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 3.0e-63 246.5 330 43.6
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 3.9e-63 246.1 302 49.0
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 5.0e-63 245.7 385 41.8
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 3.6e-61 239.6 357 41.7
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 1.2e-59 234.6 332 43.4
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 5.8e-59 232.3 303 47.2
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 9.8e-59 231.5 323 44.3
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 1.4e-57 227.6 303 46.2
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 1.7e-55 220.7 171 66.1
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 1.6e-53 214.2 190 58.4
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 2.1e-48 197.2 174 59.8
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 2.1e-48 197.2 163 62.0
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 2.7e-48 196.8 172 60.5
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.1e-41 174.9 168 57.7
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 1.1e-36 158.3 410 31.0
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 3.1e-36 156.8 412 31.1
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 8.9e-36 155.2 127 63.8
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 7.8e-32 142.1 237 43.0
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 6.9e-28 129.0 133 54.1
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 2.1e-21 107.5 67 76.1
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 1.2e-19 101.7 173 36.4
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 3.8e-18 96.7 57 84.2
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 5.3e-12 76.3 59 61.0
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 3.8e-10 70.1 115 34.8
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 2.1e-08 64.3 198 28.8
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 3.0e-07 60.5 50 60.0


User provided reference genes

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