Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1265.2 Capsicum annuum HOM05D000216 ORTHO05D000634 1.0e-44 183.0 89 100.0
Migut.D01414 Erythranthe guttata HOM05D000216 ORTHO05D000634 6.6e-15 84.0 61 65.6
Solyc12g062650.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-12 75.9 51 66.7
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-10 69.3 41 80.5
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 2.8e-10 68.6 75 56.0
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 6.3e-10 67.4 37 83.8
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 8.3e-10 67.0 37 86.5
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 8.3e-10 67.0 37 86.5
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 1.4e-09 66.2 37 83.8
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.4e-09 66.2 37 83.8
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.4e-09 66.2 37 83.8
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 1.8e-09 65.9 37 81.1
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-09 65.9 37 81.1
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-09 65.9 37 81.1
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-09 65.9 37 81.1
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-09 65.9 37 81.1
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-09 65.9 37 81.1
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.8e-09 65.9 37 81.1
MELO3C001268.2 Cucumis melo HOM05D000216 ORTHO05D000634 3.1e-09 65.1 37 81.1
MELO3C028015.2 Cucumis melo HOM05D000216 ORTHO05D000634 3.1e-09 65.1 37 81.1
MELO3C028016.2 Cucumis melo HOM05D000216 ORTHO05D000634 3.1e-09 65.1 37 81.1
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 3.1e-09 65.1 37 81.1
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 3.1e-09 65.1 37 81.1
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.1e-09 65.1 37 81.1
Solyc04g018250.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.1e-09 65.1 37 78.4
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 4.1e-09 64.7 37 81.1
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 4.1e-09 64.7 37 81.1
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 4.1e-09 64.7 37 81.1
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 4.1e-09 64.7 37 81.1
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 4.1e-09 64.7 37 81.1
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 5.4e-09 64.3 36 86.1
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.4e-09 64.3 37 78.4
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 5.4e-09 64.3 37 81.1
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 5.4e-09 64.3 37 81.1
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 5.4e-09 64.3 37 81.1
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 7.0e-09 63.9 37 81.1
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 7.0e-09 63.9 37 81.1
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 9.2e-09 63.5 37 78.4
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 9.2e-09 63.5 37 78.4
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.2e-08 63.2 68 48.5
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 78.4
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 78.4
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 81.1
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 81.1
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 81.1
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 81.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.2e-08 63.2 37 81.1
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 1.2e-08 63.2 37 81.1
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.2e-08 63.2 37 81.1
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 81.1
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.2e-08 63.2 37 78.4
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.2e-08 63.2 37 78.4
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.6e-08 62.8 37 78.4
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.0e-08 62.4 37 78.4
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.0e-08 62.4 37 78.4
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-08 62.4 37 78.4
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.7e-08 62.0 37 78.4
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 2.7e-08 62.0 37 81.1
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.7e-08 62.0 37 78.4
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 2.7e-08 62.0 37 78.4
CAN.G100.42 Capsicum annuum HOM05D000216 ORTHO05D000634 3.5e-08 61.6 37 78.4
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.5e-08 61.6 37 78.4
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.5e-08 61.6 37 78.4
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 3.5e-08 61.6 38 78.9
Nitab4.5_0016036g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.5e-08 61.2 47 66.0
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 5.9e-08 60.8 37 73.0
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 5.9e-08 60.8 37 73.0
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 5.9e-08 60.8 37 73.0
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 5.9e-08 60.8 37 73.0
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 5.9e-08 60.8 37 73.0
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 7.8e-08 60.5 37 73.0
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-08 60.5 35 80.0
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 7.8e-08 60.5 37 75.7
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.0e-07 60.1 36 77.8
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 1.0e-07 60.1 37 73.0
Gohir.D01G206650 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.3e-07 59.7 36 77.8
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 2.9e-07 58.5 37 73.0
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.9e-06 55.8 78 46.2
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 4.3e-06 54.7 31 83.9
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 7.3e-06 53.9 37 67.6


User provided reference genes

Program Settings