Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 4.2e-142 508.1 264 100.0
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 2.1e-117 426.0 264 82.6
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.1e-117 426.0 245 86.5
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 5.7e-115 417.9 269 83.6
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 7.4e-115 417.5 264 82.2
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 7.7e-96 354.4 272 70.6
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.8e-95 352.1 267 72.7
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 5.2e-92 341.7 245 71.8
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.1e-89 334.0 267 67.8
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.2e-88 330.5 258 65.9
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 4.5e-88 328.6 258 65.5
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.0e-87 327.4 258 65.1
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.7e-87 326.6 262 66.4
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.2e-87 326.2 254 67.3
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.2e-85 320.5 266 66.2
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.2e-85 320.5 239 66.9
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.6e-85 320.1 264 63.6
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-85 319.7 256 66.0
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-85 319.7 256 66.0
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 3.6e-85 318.9 260 65.0
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.7e-85 318.5 256 65.2
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 4.7e-85 318.5 262 63.7
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.8e-84 316.6 258 65.9
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 3.0e-84 315.8 223 72.2
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 3.0e-84 315.8 239 66.1
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 5.2e-84 315.1 244 68.0
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 6.8e-84 314.7 257 65.0
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.2e-83 313.9 260 64.6
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.0e-83 313.2 257 64.6
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.4e-83 312.4 260 64.2
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.4e-83 312.4 260 64.2
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 3.4e-83 312.4 260 64.6
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 5.7e-83 311.6 262 63.0
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 7.5e-83 311.2 270 62.2
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 7.5e-83 311.2 245 64.9
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 9.8e-83 310.8 260 61.9
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.7e-82 310.1 239 66.9
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.7e-82 310.1 261 62.8
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.7e-82 310.1 261 62.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.7e-82 310.1 215 69.8
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.2e-82 309.7 211 72.0
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.7e-82 308.9 235 66.4
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 3.7e-82 308.9 245 64.5
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.9e-82 308.5 245 65.7
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 8.3e-82 307.8 261 62.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.8e-81 306.6 264 63.6
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.4e-81 306.2 268 59.3
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 3.1e-81 305.8 264 60.6
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 9.2e-81 304.3 281 60.5
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 9.2e-81 304.3 268 59.0
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 9.2e-81 304.3 312 57.1
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 2.0e-80 303.1 264 61.7
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 2.0e-80 303.1 256 60.9
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 3.5e-80 302.4 243 65.0
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 5.9e-80 301.6 243 64.6
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 3.8e-79 298.9 225 66.2
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 8.6e-79 297.7 270 60.7
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.3e-78 295.8 236 65.3
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 9.5e-78 294.3 250 60.0
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 3.6e-77 292.4 255 60.0
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.8e-76 290.0 265 58.9
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.8e-76 290.0 252 58.7
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.8e-76 290.0 259 61.0
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.0e-76 288.9 287 56.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 4.0e-76 288.9 261 58.2
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.2e-75 287.3 257 61.1
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 3.4e-75 285.8 244 61.5
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 7.5e-75 284.6 261 59.4
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.3e-74 283.9 245 58.8
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.7e-74 283.5 234 61.5
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.7e-74 283.5 264 57.2
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 2.2e-74 283.1 225 62.7
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 2.2e-74 283.1 258 56.6
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 8.3e-74 281.2 241 60.6
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.8e-73 280.0 228 61.4
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.8e-73 280.0 348 46.8
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.4e-73 279.6 260 58.1
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 3.2e-73 279.3 257 60.3
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 9.2e-73 277.7 247 57.1
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.5e-72 275.8 195 66.2
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 7.8e-72 274.6 227 62.1
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 2.3e-71 273.1 261 57.9
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.1e-70 270.8 267 52.8
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 1.5e-70 270.4 261 58.6
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.9e-70 270.0 257 60.7
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.0e-68 264.2 259 53.7
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 8.9e-68 261.2 227 58.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.2e-67 260.8 248 54.4
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.3e-66 257.3 193 64.8
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.3e-66 257.3 193 64.8
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.1e-65 254.2 292 53.8
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 2.7e-64 249.6 262 53.8
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 6.6e-63 245.0 177 66.1
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.1e-60 237.7 219 57.1
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 2.0e-59 233.4 455 36.7
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 7.5e-59 231.5 223 58.3
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.7e-58 230.3 260 51.2
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.2e-58 229.9 246 53.7
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 9.2e-49 198.0 244 48.0
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 2.7e-48 196.4 136 66.9
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 7.3e-46 188.3 157 59.2
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 7.1e-41 171.8 216 42.1
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 5.3e-36 155.6 157 58.6
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 1.3e-34 151.0 263 41.1
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 3.5e-32 142.9 221 36.2
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 9.0e-28 128.3 90 63.3
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.9e-27 124.8 132 49.2
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.2e-26 123.6 96 60.4
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.4e-25 120.2 120 60.0
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 9.6e-22 108.2 257 31.9
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 9.6e-22 108.2 254 31.9
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 8.1e-21 105.1 88 54.5
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 1.4e-20 104.4 117 54.7
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 1.7e-18 97.4 178 37.1
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.9e-17 94.0 131 43.5
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.2e-16 91.3 118 50.8
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 8.7e-15 85.1 101 53.5
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 1.4e-12 77.8 86 52.3
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 7.6e-11 72.0 85 49.4
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 1.3e-10 71.2 233 30.9
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 1.6e-08 64.3 136 27.2
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 2.1e-08 63.9 54 53.7
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.6e-08 62.8 135 28.9
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 3.9e-07 59.7 149 27.5
Pp3c19_13839 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.1e-06 58.2 118 33.9
FvH4_6g04370 Fragaria vesca HOM05D045458 ORTHO05D045905 7.4e-06 55.5 42 57.1


User provided reference genes

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