Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 2.6e-172 608.6 299 100.0
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 4.6e-121 438.3 230 91.7
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 5.1e-120 434.9 230 90.9
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.1e-119 433.7 230 90.0
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 1.6e-118 429.9 230 90.0
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 2.8e-118 429.1 230 88.7
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 6.9e-117 424.5 230 87.8
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 2.0e-116 422.9 255 81.2
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 5.8e-116 421.4 230 88.7
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 1.2e-113 413.7 234 84.6
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 4.8e-110 401.7 251 77.3
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 9.0e-109 397.5 246 76.8
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 1.5e-108 396.7 246 77.6
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 1.5e-108 396.7 256 75.0
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 5.8e-108 394.8 256 75.8
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 6.0e-105 384.8 247 74.9
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 1.0e-104 384.0 237 74.7
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 3.0e-104 382.5 246 74.4
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 5.1e-104 381.7 247 72.9
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 5.1e-104 381.7 247 75.3
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 5.6e-103 378.3 248 73.4
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 2.1e-102 376.3 246 71.5
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 2.1e-102 376.3 247 71.3
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 2.8e-102 375.9 230 77.0
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 3.7e-102 375.6 247 72.9
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 8.2e-102 374.4 247 70.0
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 8.2e-102 374.4 231 77.5
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 8.2e-102 374.4 240 75.4
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.4e-101 373.6 247 72.5
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 2.4e-101 372.9 251 72.1
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 2.4e-101 372.9 247 73.3
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 4.0e-101 372.1 247 72.5
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 6.9e-101 371.3 254 70.5
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 9.0e-101 370.9 247 71.7
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 2.0e-100 369.8 244 74.2
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 4.5e-100 368.6 247 70.9
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 4.5e-100 368.6 247 72.5
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 4.5e-100 368.6 247 70.9
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 4.5e-100 368.6 243 73.3
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 4.5e-100 368.6 247 70.9
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 5.8e-100 368.2 247 70.0
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 4.9e-99 365.2 231 74.9
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 6.5e-99 364.8 266 68.0
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 8.4e-99 364.4 252 71.0
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 1.1e-98 364.0 247 71.3
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 1.4e-98 363.6 244 71.7
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 2.5e-98 362.8 247 69.6
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 2.5e-98 362.8 247 69.6
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 3.2e-98 362.5 247 69.6
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 4.2e-98 362.1 247 70.9
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 4.2e-98 362.1 247 70.9
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 5.5e-98 361.7 243 71.2
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 5.5e-98 361.7 247 69.2
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 5.5e-98 361.7 246 71.5
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 5.5e-98 361.7 247 69.2
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 7.1e-98 361.3 231 75.8
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 9.3e-98 360.9 231 74.0
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.2e-97 360.5 247 70.0
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 1.6e-97 360.1 246 69.5
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.6e-97 360.1 247 70.4
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.6e-97 360.1 249 69.1
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 2.1e-97 359.8 247 68.8
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 2.1e-97 359.8 247 69.2
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 6.0e-97 358.2 247 70.9
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 7.9e-97 357.8 232 72.8
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.8e-96 356.7 243 69.5
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 3.0e-96 355.9 250 70.4
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 5.1e-96 355.1 243 70.0
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.1e-95 354.0 235 72.8
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 1.5e-95 353.6 247 68.4
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.9e-95 353.2 231 72.3
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.5e-95 352.8 243 69.1
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 7.4e-95 351.3 231 71.9
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 9.7e-95 350.9 235 71.5
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.3e-94 350.5 235 71.5
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.3e-94 350.5 235 71.5
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.3e-94 350.5 232 72.8
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 1.3e-94 350.5 252 69.0
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 1.6e-94 350.1 252 68.3
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.6e-94 350.1 252 68.3
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.6e-94 350.1 252 66.7
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 2.2e-94 349.7 235 71.1
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 2.2e-94 349.7 235 71.1
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 2.2e-94 349.7 230 70.9
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 3.7e-94 349.0 241 69.7
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 3.7e-94 349.0 230 71.3
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 6.3e-94 348.2 240 68.8
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 6.3e-94 348.2 247 68.0
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 8.2e-94 347.8 231 72.3
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.1e-93 347.4 252 67.9
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 1.1e-93 347.4 243 68.3
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 1.4e-93 347.1 231 71.4
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.4e-93 347.1 231 72.3
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.4e-93 347.1 231 72.3
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 1.8e-93 346.7 243 67.9
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 2.4e-93 346.3 220 74.5
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.4e-93 346.3 230 72.6
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 4.1e-93 345.5 231 71.0
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 2.0e-92 343.2 231 71.0
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 2.6e-92 342.8 247 66.8
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 2.6e-92 342.8 217 75.6
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 5.9e-92 341.7 235 70.2
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 2.2e-91 339.7 233 68.2
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 6.1e-89 331.6 231 68.0
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 1.2e-84 317.4 230 67.8
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 2.0e-84 316.6 243 63.4
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 7.2e-82 308.1 251 59.0
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 9.4e-82 307.8 234 59.8
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 7.0e-77 291.6 253 53.8
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 8.5e-75 284.6 252 52.4
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 3.0e-72 276.2 239 55.6
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.6e-68 263.8 234 60.7
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.5e-63 247.3 137 90.5
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 2.0e-55 220.3 252 44.8
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 5.7e-47 192.2 274 38.3
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 4.9e-46 189.1 115 82.6
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.2e-41 174.5 248 39.1
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 3.2e-37 159.8 206 42.2
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 6.6e-35 152.1 252 36.1
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 1.9e-29 134.0 81 71.6
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 1.3e-27 127.9 94 66.0
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 5.6e-18 95.9 74 60.8
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 1.3e-14 84.7 158 34.2
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 7.6e-07 58.9 83 41.0


User provided reference genes

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