Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 5.2e-66 254.2 127 100.0
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.6e-51 206.1 120 88.3
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 1.6e-51 206.1 120 88.3
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 1.6e-51 206.1 120 88.3
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 1.6e-51 206.1 120 88.3
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 5.8e-49 197.6 120 84.2
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 9.9e-49 196.8 120 83.3
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 9.9e-49 196.8 120 83.3
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.3e-48 196.4 120 84.2
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.3e-48 196.4 120 83.3
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 1.3e-48 196.4 120 83.3
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.7e-48 196.1 120 83.3
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.7e-48 196.1 120 83.3
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.7e-48 196.1 120 83.3
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 1.7e-48 196.1 120 83.3
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 2.2e-48 195.7 120 83.3
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 4.9e-48 194.5 120 82.5
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 4.9e-48 194.5 120 82.5
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 6.4e-48 194.1 120 81.7
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 6.4e-48 194.1 120 81.7
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 6.4e-48 194.1 120 81.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 8.4e-48 193.7 120 82.5
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 8.4e-48 193.7 120 82.5
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 1.9e-47 192.6 120 81.7
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 2.4e-47 192.2 120 80.8
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 2.4e-47 192.2 120 80.8
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 2.4e-47 192.2 120 80.8
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 2.4e-47 192.2 120 80.8
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 4.2e-47 191.4 120 80.8
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 5.4e-47 191.0 120 81.7
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 5.4e-47 191.0 120 81.7
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.1e-47 190.7 123 82.1
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 9.3e-47 190.3 120 81.7
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 9.3e-47 190.3 120 81.7
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 9.3e-47 190.3 120 81.7
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 9.3e-47 190.3 119 80.7
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.2e-46 189.9 120 80.0
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.1e-46 189.1 111 90.1
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-46 189.1 120 80.0
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 2.7e-46 188.7 120 81.7
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 2.7e-46 188.7 120 80.8
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 2.7e-46 188.7 120 80.8
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 2.7e-46 188.7 120 80.8
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 2.7e-46 188.7 120 81.7
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 2.7e-46 188.7 120 80.0
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.6e-46 188.0 120 79.2
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 3.3e-44 181.8 120 76.7
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 4.8e-43 177.9 103 90.3
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 8.1e-43 177.2 114 83.3
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 9.0e-42 173.7 120 75.0
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 7.6e-41 170.6 120 74.2
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 7.6e-41 170.6 120 73.3
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 7.6e-41 170.6 120 73.3
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 1.3e-40 169.9 107 79.4
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 1.4e-39 166.4 101 84.2
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.4e-39 164.5 96 87.5
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 3.3e-36 155.2 100 81.0
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 3.3e-36 155.2 92 89.1
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 5.6e-36 154.5 100 81.0
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 9.6e-36 153.7 94 81.9
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 9.6e-36 153.7 91 87.9
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-35 152.5 92 85.9
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.8e-35 152.1 91 86.8
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.8e-35 152.1 91 86.8
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.8e-35 152.1 91 86.8
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-35 151.0 91 85.7
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.1e-34 148.7 106 76.4
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.0e-34 148.3 100 78.0
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.9e-34 147.5 88 87.5
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 2.9e-32 142.1 102 74.5
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 2.9e-32 142.1 82 89.0
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-29 133.7 81 86.4
Eucgr.C02946 Eucalyptus grandis HOM05D000216 ORTHO05D001131 9.6e-28 127.1 70 91.4
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 8.2e-27 124.0 108 67.6
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 8.2e-27 124.0 66 93.9
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 8.2e-27 124.0 81 77.8
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.8e-26 122.9 76 78.9
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 5.3e-26 121.3 89 66.3
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 6.9e-26 120.9 66 92.4
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 3.4e-25 118.6 66 87.9
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 3.4e-25 118.6 66 87.9
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 3.4e-25 118.6 65 90.8
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 2.9e-24 115.5 66 86.4
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 2.9e-24 115.5 89 74.2
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 5.5e-23 111.3 68 83.8
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 3.0e-21 105.5 62 85.5
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.1e-20 103.6 62 85.5
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 1.5e-20 103.2 62 85.5
Solyc04g026310.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.9e-20 102.8 66 75.8
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 3.3e-20 102.1 61 83.6
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 2.2e-19 99.4 65 75.4
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.1e-18 97.1 61 78.7
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 6.9e-18 94.4 54 83.3
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 7.6e-17 90.9 119 48.7
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.7e-16 89.7 51 88.2
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.7e-16 89.7 92 50.0
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.7e-16 89.7 92 50.0
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.7e-16 89.7 92 50.0
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.7e-16 89.7 92 50.0
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.7e-16 89.7 92 50.0
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.7e-16 89.7 92 50.0
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.2e-16 89.4 49 91.8
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 1.2e-14 83.6 64 71.9
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 1.0e-13 80.5 53 75.5
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.1e-12 77.0 72 65.3
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 1.7e-11 73.2 57 57.9
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.7e-11 73.2 51 74.5
EL10Ac1g01787 Beta vulgaris HOM05D000216 ORTHO05D001131 6.3e-11 71.2 117 41.0
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 6.3e-11 71.2 59 67.8
Nitab4.5_0000095g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.4e-10 70.1 53 62.3
arahy.Tifrunner.gnm1.ann1.V1C6S4 Arachis hypogaea HOM05D000216 ORTHO05D001131 5.9e-09 64.7 38 78.9
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.0e-08 63.9 33 90.9
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 5.5e-07 58.2 40 67.5
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 5.5e-07 58.2 40 65.0
Oeu012828.1 Olea europaea HOM05D000216 ORTHO05D001131 7.2e-07 57.8 40 65.0
TPR.G4503 Trifolium pratense HOM05D000216 ORTHO05D001131 1.2e-06 57.0 50 60.0
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 1.6e-06 56.6 44 61.4
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.1e-06 56.2 40 65.0
EL10Ac1g01786 Beta vulgaris HOM05D000216 ORTHO05D001131 3.6e-06 55.5 35 68.6
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.7e-06 55.1 34 82.4


User provided reference genes

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