Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p15190 Brassica napus HOM05D006183 ORTHO05D007844 6.3e-199 697.2 343 100.0
BolC9t54425H Brassica oleracea HOM05D006183 ORTHO05D007844 6.3e-199 697.2 343 100.0
BcaNung04798 Brassica carinata HOM05D006183 ORTHO05D007844 3.4e-176 621.7 306 100.0
Sp3g33570 Schrenkiella parvula HOM05D006183 ORTHO05D007844 9.3e-126 454.1 305 78.0
CARHR110860 Cardamine hirsuta HOM05D006183 ORTHO05D007844 1.0e-124 450.7 304 77.0
BcaB03g16820 Brassica carinata HOM05D006183 ORTHO05D007844 3.0e-124 449.1 304 76.6
C07p00800 Brassica napus HOM05D006183 ORTHO05D007844 6.7e-124 448.0 304 76.6
AL3G53280 Arabidopsis lyrata HOM05D006183 ORTHO05D007844 3.3e-123 445.7 304 76.6
Carub.0003s3467 Capsella rubella HOM05D006183 ORTHO05D007844 5.6e-123 444.9 310 75.5
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 1.3e-122 443.7 305 75.7
BraA07t27830Z Brassica rapa HOM05D006183 ORTHO05D007844 1.6e-122 443.4 305 76.1
A07p00380 Brassica napus HOM05D006183 ORTHO05D007844 3.7e-122 442.2 305 75.7
BcaC06g36716 Brassica carinata HOM05D006183 ORTHO05D007844 1.8e-121 439.9 304 75.7
BolC7t40519H Brassica oleracea HOM05D006183 ORTHO05D007844 1.8e-121 439.9 304 75.7
AT2G20330 Arabidopsis thaliana HOM05D006183 ORTHO05D007844 6.9e-121 438.0 304 75.0
Aa31LG8G17320 Aethionema arabicum HOM05D006183 ORTHO05D007844 3.3e-107 392.5 299 68.6
THA.LOC104814536 Tarenaya hassleriana HOM05D006183 ORTHO05D007844 1.8e-105 386.7 288 69.1
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 2.4e-105 386.3 286 68.2
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 3.1e-105 386.0 286 67.5
Atru.chr5.1959 Acer truncatum HOM05D006183 ORTHO05D007844 4.1e-105 385.6 286 67.8
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 6.9e-105 384.8 286 67.1
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 2.0e-104 383.3 286 66.4
MD10G1174900 Malus domestica HOM05D006183 ORTHO05D007844 4.5e-104 382.1 286 66.4
vmacro02713 Vaccinium macrocarpon HOM05D006183 ORTHO05D007844 5.9e-104 381.7 286 66.8
ClCG07G001450 Citrullus lanatus HOM05D006183 ORTHO05D007844 1.0e-103 380.9 286 67.1
SalBow4G1671 Salvia bowleyana HOM05D006183 ORTHO05D007844 1.0e-103 380.9 286 67.1
PGR044G1356 Punica granatum HOM05D006183 ORTHO05D007844 1.3e-103 380.6 286 66.1
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 1.7e-103 380.2 286 67.1
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 2.2e-103 379.8 286 67.5
Prupe.8G213600 Prunus persica HOM05D006183 ORTHO05D007844 2.2e-103 379.8 286 65.7
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 3.8e-103 379.0 286 67.1
Hma1.2p1_2051F.1_g312550 Hydrangea macrophylla HOM05D006183 ORTHO05D007844 3.8e-103 379.0 286 66.1
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 5.0e-103 378.6 286 67.1
Cc01_g17710 Coffea canephora HOM05D006183 ORTHO05D007844 8.5e-103 377.9 286 67.1
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 1.1e-102 377.5 292 67.1
Dinv43057 Davidia involucrata HOM05D006183 ORTHO05D007844 1.1e-102 377.5 286 66.1
Aqoxy5G00112 Aquilegia oxysepala HOM05D006183 ORTHO05D007844 1.9e-102 376.7 297 64.0
FAN15G0492 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.5e-102 376.3 286 66.1
HanXRQChr03g0066991 Helianthus annuus HOM05D006183 ORTHO05D007844 2.5e-102 376.3 305 63.9
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 2.5e-102 376.3 286 67.1
RcHm_v2.0_Chr6g0286091 Rosa chinensis HOM05D006183 ORTHO05D007844 3.2e-102 375.9 286 66.1
ECA248G2561 Erigeron canadensis HOM05D006183 ORTHO05D007844 4.2e-102 375.6 297 65.0
CSS0020724 Camellia sinensis var. sinensis HOM05D006183 ORTHO05D007844 5.5e-102 375.2 286 66.1
FAN27G0957 Fragaria x ananassa HOM05D006183 ORTHO05D007844 5.5e-102 375.2 286 65.7
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 5.5e-102 375.2 292 66.1
Oeu015440.1 Olea europaea HOM05D006183 ORTHO05D007844 5.5e-102 375.2 286 66.8
MELO3C012834.2 Cucumis melo HOM05D006183 ORTHO05D007844 7.2e-102 374.8 286 66.4
Lsat_1_v5_gn_5_180141 Lactuca sativa HOM05D006183 ORTHO05D007844 7.2e-102 374.8 286 66.4
Sopen06g002920 Solanum pennellii HOM05D006183 ORTHO05D007844 7.2e-102 374.8 286 66.8
CsaV3_3G028460 Cucumis sativus L. HOM05D006183 ORTHO05D007844 9.4e-102 374.4 286 65.7
Rhsim13G0040400 Rhododendron simsii HOM05D006183 ORTHO05D007844 1.2e-101 374.0 286 65.7
TPR.G20058 Trifolium pratense HOM05D006183 ORTHO05D007844 1.2e-101 374.0 297 64.6
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 1.6e-101 373.6 292 65.4
FvH4_2g20290 Fragaria vesca HOM05D006183 ORTHO05D007844 2.1e-101 373.2 286 65.7
FAN24G0209 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.1e-101 373.2 286 65.7
CiPaw.04G191000 Carya illinoinensis HOM05D006183 ORTHO05D007844 3.6e-101 372.5 286 65.4
Glyma.19G169500 Glycine max HOM05D006183 ORTHO05D007844 4.6e-101 372.1 286 65.0
Ca_08753_v3 Cicer arietinum L. HOM05D006183 ORTHO05D007844 1.0e-100 370.9 297 63.6
SGA_v2.0_scaffold1G00669 Striga asiatica HOM05D006183 ORTHO05D007844 2.3e-100 369.8 286 66.4
Potri.014G193500 Populus trichocarpa HOM05D006183 ORTHO05D007844 3.9e-100 369.0 297 63.0
Sabra14G0143600 Salix brachista HOM05D006183 ORTHO05D007844 3.9e-100 369.0 297 62.6
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 6.7e-100 368.2 292 65.1
Thecc.01G248600 Theobroma cacao HOM05D006183 ORTHO05D007844 8.8e-100 367.9 286 65.0
Sc17g0002990 Simmondsia chinensis HOM05D006183 ORTHO05D007844 1.5e-99 367.1 299 63.9
Nitab4.5_0000326g0320 Nicotiana tabacum HOM05D006183 ORTHO05D007844 2.0e-99 366.7 286 65.0
EL10Ac7g17706 Beta vulgaris HOM05D006183 ORTHO05D007844 2.5e-99 366.3 292 64.7
Nitab4.5_0009671g0010 Nicotiana tabacum HOM05D006183 ORTHO05D007844 2.5e-99 366.3 286 65.0
Psat3g051320 Pisum sativum HOM05D006183 ORTHO05D007844 2.5e-99 366.3 297 63.6
arahy.Tifrunner.gnm1.ann1.73B1UV Arachis hypogaea HOM05D006183 ORTHO05D007844 3.3e-99 365.9 297 62.3
arahy.Tifrunner.gnm1.ann1.P69TYL Arachis hypogaea HOM05D006183 ORTHO05D007844 3.3e-99 365.9 297 62.3
Medtr7g098900 Medicago truncatula HOM05D006183 ORTHO05D007844 4.3e-99 365.5 297 63.3
Hund18298 Selenicereus undatus HOM05D006183 ORTHO05D007844 4.3e-99 365.5 292 63.4
TAR636G3003 Trochodendron aralioides HOM05D006183 ORTHO05D007844 5.7e-99 365.2 292 63.7
Migut.D00486 Erythranthe guttata HOM05D006183 ORTHO05D007844 6.3e-98 361.7 286 63.6
VMungo1383G1346 Vigna mungo HOM05D006183 ORTHO05D007844 6.3e-98 361.7 292 63.4
AUR62025425 Chenopodium quinoa HOM05D006183 ORTHO05D007844 8.2e-98 361.3 286 62.9
Eucgr.K01415 Eucalyptus grandis HOM05D006183 ORTHO05D007844 1.1e-97 360.9 286 64.3
Manes.13G038900 Manihot esculenta HOM05D006183 ORTHO05D007844 1.1e-97 360.9 286 64.0
AUR62008815 Chenopodium quinoa HOM05D006183 ORTHO05D007844 2.4e-97 359.8 292 62.3
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 2.4e-97 359.8 292 63.4
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 5.3e-97 358.6 286 62.2
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 5.3e-97 358.6 286 63.3
Lalb_Chr20g0113511 Lupinus albus HOM05D006183 ORTHO05D007844 4.5e-96 355.5 292 62.0
Ciclev10019299m.g Citrus clementina HOM05D006183 ORTHO05D007844 5.9e-96 355.1 286 63.3
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 7.7e-96 354.8 275 65.1
Sed0027453 Sechium edule HOM05D006183 ORTHO05D007844 1.0e-95 354.4 286 64.0
Solyc06g008110.4 Solanum lycopersicum HOM05D006183 ORTHO05D007844 1.7e-95 353.6 286 64.0
PSO210G4577 Papaver somniferum HOM05D006183 ORTHO05D007844 5.0e-95 352.1 286 60.8
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 9.4e-94 347.8 286 60.5
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 4.7e-93 345.5 292 60.6
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 1.1e-91 340.9 286 60.1
Peaxi162Scf00499g00067 Petunia axillaris HOM05D006183 ORTHO05D007844 4.5e-88 328.9 286 60.1
HPP92_025390 Vanilla planifolia HOM05D006183 ORTHO05D007844 5.0e-87 325.5 292 57.9
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 5.5e-86 322.0 264 61.0
SHI26778 Sapria himalayana HOM05D006183 ORTHO05D007844 4.4e-83 312.4 286 55.6
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 1.8e-81 307.0 295 53.9
COL.COLO4_20954 Corchorus olitorius HOM05D006183 ORTHO05D007844 1.7e-79 300.4 286 57.7
Mapoly0020s0160 Marchantia polymorpha HOM05D006183 ORTHO05D007844 2.1e-77 293.5 245 59.2
SMO117G0187 Selaginella moellendorffii HOM05D006183 ORTHO05D007844 5.2e-76 288.9 244 58.6
CBR_g29722 Chara braunii HOM05D006183 ORTHO05D007844 2.6e-75 286.6 308 50.3
Pp3c3_26410 Physcomitrium patens HOM05D006183 ORTHO05D007844 2.6e-75 286.6 244 57.8
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 1.3e-74 284.3 271 56.5
Rhsim08G0025400 Rhododendron simsii HOM05D006183 ORTHO05D007844 4.1e-65 252.7 310 47.4
Actinidia37559 Actinidia chinensis HOM05D006183 ORTHO05D007844 4.1e-57 226.1 189 60.3
MD05G1186900 Malus domestica HOM05D006183 ORTHO05D007844 8.6e-55 218.4 358 40.2
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 1.5e-51 207.6 278 44.6
unitig_22.g6310 Utricularia gibba HOM05D006183 ORTHO05D007844 8.9e-44 181.8 111 77.5
SHI26811 Sapria himalayana HOM05D006183 ORTHO05D007844 2.1e-37 160.6 131 60.3
Cre04.g217750 Chlamydomonas reinhardtii HOM05D006183 ORTHO05D007844 1.1e-33 148.3 287 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1686 Anthoceros agrestis HOM05D006183 ORTHO05D007844 4.1e-33 146.4 106 66.0
MCO16G174 Micromonas commoda HOM05D006183 ORTHO05D007844 8.6e-31 138.7 286 33.2
SEGI_26680 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 8.4e-18 95.5 121 40.5
BcaB07g31601 Brassica carinata HOM05D006183 ORTHO05D007844 1.7e-15 87.8 104 54.8
Dinv36951 Davidia involucrata HOM05D006183 ORTHO05D007844 2.4e-12 77.4 47 74.5
Cfa024676 Carpinus fangiana HOM05D006183 ORTHO05D007844 2.2e-10 70.9 198 31.3
HPP92_028272 Vanilla planifolia HOM05D006183 ORTHO05D007844 5.4e-09 66.2 39 74.4
PRCOL_00006356 Prasinoderma coloniale HOM05D006183 ORTHO05D007844 2.1e-08 64.3 176 30.7


User provided reference genes

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