Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p45240 Brassica napus HOM05D004976 ORTHO05D004851 1.2e-88 329.7 153 100.0
BraA07t29876Z Brassica rapa HOM05D004976 ORTHO05D004851 3.7e-34 148.7 117 51.3
BolC1t02896H Brassica oleracea HOM05D004976 ORTHO05D004851 4.1e-33 145.2 131 46.6
BraA02t07436Z Brassica rapa HOM05D004976 ORTHO05D004851 5.9e-32 141.4 123 46.3
BolC5t29232H Brassica oleracea HOM05D004976 ORTHO05D004851 1.5e-30 136.7 114 50.9
C05p50100 Brassica napus HOM05D004976 ORTHO05D004851 9.5e-30 134.0 114 50.0
BraA01t02778Z Brassica rapa HOM05D004976 ORTHO05D004851 9.5e-30 134.0 114 50.0
BolC8t48401H Brassica oleracea HOM05D004976 ORTHO05D004851 4.7e-29 131.7 114 50.0
AT1G27870 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 8.0e-29 131.0 111 45.9
BraA07t27820Z Brassica rapa HOM05D000207 ORTHO05D001673 2.3e-28 129.4 155 43.2
BolC9t55739H Brassica oleracea HOM05D004976 ORTHO05D004851 3.1e-28 129.0 112 48.2
BraA03t14020Z Brassica rapa HOM05D004976 ORTHO05D004851 8.9e-28 127.5 123 44.7
AT2G33160 Arabidopsis thaliana HOM05D000037 ORTHO05D000150 4.4e-27 125.2 117 44.4
BolC2t08499H Brassica oleracea HOM05D004976 ORTHO05D004851 9.8e-27 124.0 132 42.4
BraA09t38717Z Brassica rapa HOM05D004976 ORTHO05D004851 1.7e-26 123.2 114 45.6
CARHR043800 Cardamine hirsuta HOM05D004976 ORTHO05D004851 2.2e-26 122.9 112 43.8
AT2G04420 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.7e-26 122.1 117 45.3
BraA09t38437Z Brassica rapa HOM05D004976 ORTHO05D004851 1.1e-25 120.6 110 47.3
BolC8t51211H Brassica oleracea HOM05D004976 ORTHO05D004851 3.2e-25 119.0 112 47.3
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 7.0e-25 117.9 113 41.6
AT2G46460 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 5.0e-23 111.7 112 40.2
BraA09t39138Z Brassica rapa HOM05D004976 ORTHO05D004851 1.1e-22 110.5 104 46.2
AT1G04625 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.5e-22 110.2 112 42.0
BolC6t38560H Brassica oleracea HOM05D004976 ORTHO05D004851 2.5e-22 109.4 107 48.6
BolC5t31734H Brassica oleracea HOM05D004976 ORTHO05D004851 5.6e-22 108.2 93 50.5
AL3G23800 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 1.2e-21 107.1 89 51.7
A09p37980 Brassica napus HOM05D004976 ORTHO05D004851 1.8e-20 103.2 113 37.2
Sp7g06900 Schrenkiella parvula HOM05D004976 ORTHO05D004851 4.0e-20 102.1 136 33.8
A10p08070 Brassica napus HOM05D004976 ORTHO05D004851 5.2e-20 101.7 113 37.2
Sp5g16840 Schrenkiella parvula HOM05D004976 ORTHO05D004851 8.9e-20 100.9 112 37.5
BolC7t41689H Brassica oleracea HOM05D004976 ORTHO05D004851 1.2e-19 100.5 87 49.4
BraA06t23723Z Brassica rapa HOM05D004976 ORTHO05D004851 2.0e-19 99.8 116 38.8
AL8G15920 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 2.6e-19 99.4 125 36.0
Sp1g19240 Schrenkiella parvula HOM05D004976 ORTHO05D004851 2.6e-19 99.4 103 40.8
Thhalv10019506m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 3.4e-19 99.0 87 43.7
BolC9t56783H Brassica oleracea HOM05D004976 ORTHO05D004851 5.8e-19 98.2 83 50.6
C08p26150 Brassica napus HOM05D004976 ORTHO05D004851 2.2e-18 96.3 119 39.5
AT1G47497 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.7e-18 95.5 89 43.8
BolC7t43279H Brassica oleracea HOM05D004976 ORTHO05D004851 3.7e-18 95.5 84 48.8
A02p28410 Brassica napus HOM05D004976 ORTHO05D004851 5.4e-17 91.7 110 40.0
BraA08t35107Z Brassica rapa HOM05D004976 ORTHO05D004851 4.6e-16 88.6 86 43.0
Carub.0004s1022 Capsella rubella HOM05D004976 ORTHO05D004851 7.8e-16 87.8 101 37.6
C05p41910 Brassica napus HOM05D004976 ORTHO05D004851 1.7e-15 86.7 106 38.7
Thhalv10015769m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 3.0e-15 85.9 114 33.3
Thhalv10009902m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 8.6e-15 84.3 87 42.5
BolC2t11077H Brassica oleracea HOM05D004976 ORTHO05D004851 1.1e-14 84.0 123 34.1
CARHR123710 Cardamine hirsuta HOM05D004976 ORTHO05D004851 1.1e-14 84.0 90 42.2
Thhalv10022287m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 1.1e-14 84.0 95 36.8
C09p05940 Brassica napus HOM05D004976 ORTHO05D004851 1.9e-14 83.2 132 34.1
BolC9t53519H Brassica oleracea HOM05D004976 ORTHO05D004851 1.9e-14 83.2 132 34.1
C02p26690 Brassica napus HOM05D004976 ORTHO05D004851 7.3e-14 81.3 100 38.0
Thhalv10003001m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 7.3e-14 81.3 125 33.6
BolC9t59872H Brassica oleracea HOM05D001406 ORTHO05D002467 1.2e-13 80.5 113 30.1
Sp4g00970 Schrenkiella parvula HOM05D004976 ORTHO05D004851 3.6e-13 79.0 88 37.5
Thhalv10003059m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 4.7e-13 78.6 117 34.2
A06p33810 Brassica napus HOM05D004976 ORTHO05D004851 8.1e-13 77.8 115 34.8
Aa31LG8G10880 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-12 77.4 107 32.7
C09p45640 Brassica napus HOM05D004976 ORTHO05D004851 2.3e-12 76.3 113 31.0
BolC9t56103H Brassica oleracea HOM05D004976 ORTHO05D004851 3.1e-12 75.9 113 31.0
Aa31LG9G1700 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-12 75.5 108 31.5
BcaB05g22432 Brassica carinata HOM05D000003 ORTHO05D000004 6.8e-12 74.7 89 33.7
BcaC06g30787 Brassica carinata HOM05D000003 ORTHO05D000004 8.9e-12 74.3 106 34.0
BcaB01g00479 Brassica carinata HOM05D000003 ORTHO05D004851 1.2e-11 73.9 103 34.0
C02p49980 Brassica napus HOM05D004976 ORTHO05D004851 1.2e-11 73.9 112 31.2
BolC2t07249H Brassica oleracea HOM05D004976 ORTHO05D004851 1.5e-11 73.6 67 46.3
BolC3t21482H Brassica oleracea HOM05D004976 ORTHO05D004851 1.5e-11 73.6 112 32.1
BcaC05g28671 Brassica carinata HOM05D000003 ORTHO05D004851 2.6e-11 72.8 88 38.6
BcaB08g35528 Brassica carinata HOM05D004976 ORTHO05D004851 4.4e-11 72.0 107 29.9
C02p57240 Brassica napus HOM05D000003 ORTHO05D004851 5.8e-11 71.6 113 29.2
BolC1t01989H Brassica oleracea HOM05D004976 ORTHO05D004851 7.6e-11 71.2 113 30.1
BraA01t00584Z Brassica rapa HOM05D004976 ORTHO05D004851 7.6e-11 71.2 79 44.3
BcaB02g10660 Brassica carinata HOM05D000003 ORTHO05D000004 9.9e-11 70.9 111 29.7
BcaB06g27196 Brassica carinata HOM05D000003 ORTHO05D000004 9.9e-11 70.9 103 33.0
BraA09t36601Z Brassica rapa HOM05D004976 ORTHO05D004851 9.9e-11 70.9 52 50.0
Aa31sc85G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-10 68.6 108 29.6
CARHR146840 Cardamine hirsuta HOM05D004976 ORTHO05D004851 4.9e-10 68.6 109 26.6
AT1G77815 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.9e-09 66.6 48 50.0
BcaNung01203 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-09 66.6 141 29.1
BcaB04g17741 Brassica carinata HOM05D000003 ORTHO05D004851 2.4e-09 66.2 110 30.9
BcaC07g40765 Brassica carinata HOM05D000003 ORTHO05D000004 2.4e-09 66.2 106 30.2
BolC5t33522H Brassica oleracea HOM05D004976 ORTHO05D004851 2.4e-09 66.2 79 38.0
BcaB07g31659 Brassica carinata HOM05D000003 ORTHO05D000004 5.4e-09 65.1 98 31.6
Aa31LG9G3130 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.1e-09 64.7 112 28.6
AT1G27220 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 7.1e-09 64.7 70 40.0
SpUn0001_0110 Schrenkiella parvula HOM05D000003 ORTHO05D004851 7.1e-09 64.7 82 34.1
AT5G65005 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.6e-08 63.5 115 28.7
CARHR183650 Cardamine hirsuta HOM05D004976 ORTHO05D004851 2.7e-08 62.8 67 41.8
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 4.6e-08 62.0 93 31.2
BolC2t08873H Brassica oleracea HOM05D004976 ORTHO05D004851 1.0e-07 60.8 118 28.0
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-07 60.5 88 37.5
AT3G32130 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.3e-07 60.5 80 36.2
Sp6g05670 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.3e-07 60.5 117 26.5
BcaC03g16450 Brassica carinata HOM05D000003 ORTHO05D004851 2.3e-07 59.7 96 30.2
BraA07t28107Z Brassica rapa HOM05D000003 ORTHO05D001498 2.3e-07 59.7 87 28.7
Aa31LG8G11710 Aethionema arabicum HOM05D004976 ORTHO05D004851 3.0e-07 59.3 82 32.9
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.9e-07 58.9 88 30.7
SHI38494 Sapria himalayana HOM05D000024 ORTHO05D000007 6.6e-07 58.2 90 43.3
MBI03_g40524_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.6e-07 57.8 116 31.0
Aa31LG1G5990 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 115 26.1
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 1.1e-06 57.4 93 31.2
AT5G43755 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.5e-06 57.0 111 27.0
Atru.chr8.1687 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-06 56.6 87 31.0
BcaB04g18838 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-06 56.6 108 30.6
BcaC01g02706 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-06 56.6 118 24.6
Aa31LG6G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-06 56.2 84 32.1
BcaB03g12474 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-06 56.2 81 34.6
BcaB08g35608 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-06 56.2 81 34.6
Thhalv10027203m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 2.5e-06 56.2 56 39.3
Sp7g07570 Schrenkiella parvula HOM05D004976 ORTHO05D004851 2.5e-06 56.2 80 33.8
Atru.chr2.53 Acer truncatum HOM05D000003 ORTHO05D000022 3.3e-06 55.8 93 31.2
BcaC01g03112 Brassica carinata HOM05D000003 ORTHO05D004851 3.3e-06 55.8 109 25.7
Lj3g0002323 Lotus japonicus HOM05D000003 ORTHO05D007254 3.3e-06 55.8 116 29.3
BcaC07g41786 Brassica carinata HOM05D004976 ORTHO05D004851 4.3e-06 55.5 57 43.9
COL.COLO4_08141 Corchorus olitorius HOM05D019840 ORTHO05D009449 4.3e-06 55.5 105 32.4
Lj1g0005496 Lotus japonicus HOM05D000003 ORTHO05D007254 4.3e-06 55.5 110 27.3
Lj3g0000535 Lotus japonicus HOM05D000003 ORTHO05D007254 4.3e-06 55.5 110 26.4
Nitab4.5_0000654g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.3e-06 55.5 106 34.0
Atru.chr1.1336 Acer truncatum HOM05D000003 ORTHO05D000022 5.6e-06 55.1 89 31.5
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 7.3e-06 54.7 113 27.4
MBI14_g13525_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.3e-06 54.7 88 33.0
Aa31LG10G10270 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.6e-06 54.3 75 32.0
PSO700G0219 Papaver somniferum HOM05D003407 ORTHO05D001026 9.6e-06 54.3 91 34.1
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 9.6e-06 54.3 83 33.7


User provided reference genes

Program Settings