Gene: AT3G25270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G25270
  • Transcript Identifier AT3G25270.1
  • Gene Type Coding gene
  • Location Chr3 : 9203934-9204965 : negative

Gene Family Information

  • ID HOM05D004976
  • #Genes/#Species 149/11
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G25270.1
  • uniprot Q9LSE9

Descriptions

  • Description Ribonuclease H-like superfamily protein
  • Computational description Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G04420.1); Has 1562 Blast hits to 1555 proteins in 146 species: Archae - 20; Bacteria - 208; Metazoa - 1; Fungi - 0; Plants - 1330; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0006278
IEA
GOA DatabaseRNA-dependent DNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
Gene OntologyRNA-DNA hybrid ribonuclease activity
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0003964
IEA
GOA DatabaseRNA-directed DNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR044730 Ribonuclease H-like domain, plant type
IPR012337 Ribonuclease H-like superfamily
IPR026960 Reverse transcriptase zinc-binding domain
IPR002156 Ribonuclease H domain
Mapman id Description
35.1 not assigned.annotated