Gene: AT4G29090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G29090
  • Transcript Identifier AT4G29090.1
  • Gene Type Coding gene
  • Location Chr4 : 14333528-14335255 : positive

Gene Family Information

  • ID HOM05D000003
  • #Genes/#Species 24815/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G29090.1
  • uniprot Q9SZD8

Descriptions

  • Description Ribonuclease H-like superfamily protein
  • Computational description Ribonuclease H-like superfamily protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G34320.1); Has 2218 Blast hits to 2138 proteins in 33 species: Archae - 2; Bacteria - 6; Metazoa - 6; Fungi - 0; Plants - 2203; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0006278
IEA
GOA DatabaseRNA-dependent DNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
Gene OntologyRNA-DNA hybrid ribonuclease activity
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0003964
IEA
GOA DatabaseRNA-directed DNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026960 Reverse transcriptase zinc-binding domain
IPR002156 Ribonuclease H domain
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR044730 Ribonuclease H-like domain, plant type
Mapman id Description
35.1 not assigned.annotated