Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p67460 Brassica napus HOM05D001719 ORTHO05D033216 4.0e-34 147.5 73 100.0
AL4G37080 Arabidopsis lyrata HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
AT2G39670 Arabidopsis thaliana HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
BcaB02g09098 Brassica carinata HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
BcaC02g12095 Brassica carinata HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
C04p07920 Brassica napus HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
BolC4t22409H Brassica oleracea HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
CARHR134510 Cardamine hirsuta HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
Sp4g21930 Schrenkiella parvula HOM05D001719 ORTHO05D007646 2.4e-15 85.1 49 83.7
Cc02_g07790 Coffea canephora HOM05D001719 ORTHO05D007646 3.2e-15 84.7 49 81.6
Duzib114G0935 Durio zibethinus HOM05D001719 ORTHO05D007646 3.2e-15 84.7 52 75.0
Carub.0004s2171 Capsella rubella HOM05D001719 ORTHO05D007646 4.1e-15 84.3 49 81.6
Thhalv10016689m.g Eutrema salsugineum HOM05D001719 ORTHO05D007646 4.1e-15 84.3 49 81.6
Aa31LG5G19980 Aethionema arabicum HOM05D001719 ORTHO05D007646 5.4e-15 84.0 49 81.6
Aqoxy2G02149 Aquilegia oxysepala HOM05D001719 ORTHO05D007646 5.4e-15 84.0 49 81.6
A05p06770 Brassica napus HOM05D001719 ORTHO05D007646 5.4e-15 84.0 49 81.6
BraA05t19644Z Brassica rapa HOM05D001719 ORTHO05D007646 5.4e-15 84.0 49 81.6
Lsat_1_v5_gn_9_66060 Lactuca sativa HOM05D001719 ORTHO05D007646 5.4e-15 84.0 49 79.6
VMungo0647G1743 Vigna mungo HOM05D001719 ORTHO05D007646 5.4e-15 84.0 49 81.6
COL.COLO4_15056 Corchorus olitorius HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 79.6
Gohir.D05G301400 Gossypium hirsutum HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 79.6
Gorai.009G319500 Gossypium raimondii HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 79.6
HanXRQChr02g0049161 Helianthus annuus HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 77.6
Potri.008G056500 Populus trichocarpa HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 79.6
Sabra08G0041100 Salix brachista HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 79.6
Thecc.10G040800 Theobroma cacao HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 79.6
TAR633G0218 Trochodendron aralioides HOM05D001719 ORTHO05D007646 7.0e-15 83.6 49 79.6
PSO339G2556 Papaver somniferum HOM05D001719 ORTHO05D007646 9.2e-15 83.2 49 81.6
ECA232G4841 Erigeron canadensis HOM05D001719 ORTHO05D007646 1.2e-14 82.8 49 77.6
Eucgr.J00005 Eucalyptus grandis HOM05D001719 ORTHO05D007646 1.2e-14 82.8 49 77.6
Glyma.14G068600 Glycine max HOM05D001719 ORTHO05D007646 1.2e-14 82.8 49 79.6
Nn2g13352 Nelumbo nucifera HOM05D001719 ORTHO05D007646 1.2e-14 82.8 49 79.6
Atru.chr12.441 Acer truncatum HOM05D001719 ORTHO05D007646 1.6e-14 82.4 49 79.6
Atru.chr12.442 Acer truncatum HOM05D001719 ORTHO05D007646 1.6e-14 82.4 49 79.6
Ah.16g102360 Amaranthus hybridus HOM05D001719 ORTHO05D007646 1.6e-14 82.4 49 81.6
MBI05_g22025_MAGBIO Magnolia biondii HOM05D001719 ORTHO05D007646 1.6e-14 82.4 49 77.6
CANSAT56G1570 Cannabis sativa HOM05D001719 ORTHO05D007646 2.0e-14 82.0 49 77.6
CANSAT56G2080 Cannabis sativa HOM05D001719 ORTHO05D007646 2.0e-14 82.0 49 77.6
ClCG07G003250 Citrullus lanatus HOM05D001719 ORTHO05D007646 2.0e-14 82.0 49 77.6
Gohir.A05G301700 Gossypium hirsutum HOM05D001719 ORTHO05D007646 2.0e-14 82.0 49 77.6
Sed0013284 Sechium edule HOM05D001719 ORTHO05D007646 2.0e-14 82.0 49 77.6
Actinidia02943 Actinidia chinensis HOM05D001719 ORTHO05D007646 2.7e-14 81.6 49 77.6
DCAR_005051 Daucus carota HOM05D001719 ORTHO05D007646 2.7e-14 81.6 49 75.5
Hma1.2p1_0953F.1_g241120 Hydrangea macrophylla HOM05D001719 ORTHO05D007646 2.7e-14 81.6 49 77.6
Nitab4.5_0000065g0020 Nicotiana tabacum HOM05D001719 ORTHO05D007646 2.7e-14 81.6 52 75.0
Nitab4.5_0001719g0010 Nicotiana tabacum HOM05D001719 ORTHO05D007646 2.7e-14 81.6 52 75.0
Prupe.2G236300 Prunus persica HOM05D001719 ORTHO05D007646 2.7e-14 81.6 49 75.5
TWI63G1737 Tripterygium wilfordii HOM05D001719 ORTHO05D007646 2.7e-14 81.6 49 77.6
CDE04G3735 Ceratophyllum demersum HOM05D001719 ORTHO05D007646 3.5e-14 81.3 49 77.6
Ciclev10031999m.g Citrus clementina HOM05D001719 ORTHO05D007646 3.5e-14 81.3 49 77.6
Migut.F00783 Erythranthe guttata HOM05D001719 ORTHO05D007646 3.5e-14 81.3 49 75.5
PGR044G0426 Punica granatum HOM05D001719 ORTHO05D007646 3.5e-14 81.3 49 77.6
Cfa001469 Carpinus fangiana HOM05D001719 ORTHO05D007646 4.6e-14 80.9 49 75.5
Haze_17073 Corylus avellana HOM05D001719 ORTHO05D007646 4.6e-14 80.9 49 75.5
Glyma.02G247700 Glycine max HOM05D001719 ORTHO05D007646 4.6e-14 80.9 49 77.6
MD07G1199600 Malus domestica HOM05D001719 ORTHO05D007646 4.6e-14 80.9 49 77.6
Medtr5g079860 Medicago truncatula HOM05D001719 ORTHO05D007646 4.6e-14 80.9 49 77.6
QL08p059654 Quercus lobata HOM05D001719 ORTHO05D007646 4.6e-14 80.9 49 75.5
Sc14g0004680 Simmondsia chinensis HOM05D001719 ORTHO05D007646 4.6e-14 80.9 49 77.6
CiPaw.01G288000 Carya illinoinensis HOM05D001719 ORTHO05D007646 5.9e-14 80.5 49 75.5
MELO3C023846.2 Cucumis melo HOM05D001719 ORTHO05D007646 5.9e-14 80.5 49 75.5
CsaV3_5G008000 Cucumis sativus L. HOM05D001719 ORTHO05D007646 5.9e-14 80.5 49 75.5
Lj8A83T63 Lonicera japonica HOM05D001719 ORTHO05D007646 5.9e-14 80.5 49 73.5
TPR.G3478 Trifolium pratense HOM05D001719 ORTHO05D007646 5.9e-14 80.5 49 75.5
MSTRG.8997 Avicennia marina HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 77.6
CAN.G130.9 Capsicum annuum HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 79.6
Ca_05895_v3 Cicer arietinum L. HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 77.6
Lalb_Chr10g0104531 Lupinus albus HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 75.5
Oeu064373.1 Olea europaea HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 79.6
Peaxi162Scf00658g00730 Petunia axillaris HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 79.6
Psat2g041640 Pisum sativum HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 77.6
Rhsim03G0130200 Rhododendron simsii HOM05D001719 ORTHO05D007646 7.8e-14 80.1 49 75.5
Lalb_Chr04g0251261 Lupinus albus HOM05D001719 ORTHO05D007646 1.0e-13 79.7 49 75.5
Phvul.008G233300 Phaseolus vulgaris HOM05D001719 ORTHO05D007646 1.0e-13 79.7 49 77.6
SHI28787 Sapria himalayana HOM05D001719 ORTHO05D007646 1.0e-13 79.7 49 75.5
GSVIVG01016561001 Vitis vinifera HOM05D001719 ORTHO05D007646 1.0e-13 79.7 49 75.5
arahy.Tifrunner.gnm1.ann1.30T4YV Arachis hypogaea HOM05D001719 ORTHO05D007646 1.3e-13 79.3 49 75.5
arahy.Tifrunner.gnm1.ann1.WUGE08 Arachis hypogaea HOM05D001719 ORTHO05D007646 1.3e-13 79.3 49 75.5
EL10Ac2g04741 Beta vulgaris HOM05D001719 ORTHO05D007646 1.3e-13 79.3 49 75.5
MD07G1012700 Malus domestica HOM05D001719 ORTHO05D007646 1.3e-13 79.3 49 75.5
Manes.10G029700 Manihot esculenta HOM05D001719 ORTHO05D007646 1.3e-13 79.3 49 77.6
Os01g0973400 Oryza sativa ssp. japonica HOM05D001719 ORTHO05D007646 1.3e-13 79.3 49 75.5
PSO151G0085 Papaver somniferum HOM05D001719 ORTHO05D007646 1.3e-13 79.3 49 79.6
FvH4_7g22600 Fragaria vesca HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
FAN01G1957 Fragaria x ananassa HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
FAN03G0055 Fragaria x ananassa HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
FAN03G1719 Fragaria x ananassa HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
FAN06G0650 Fragaria x ananassa HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
FAN06G2139 Fragaria x ananassa HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
FAN10G1208 Fragaria x ananassa HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
RcHm_v2.0_Chr1g0367701 Rosa chinensis HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 71.4
Hund13767 Selenicereus undatus HOM05D001719 ORTHO05D007646 1.7e-13 79.0 49 75.5
LjContig00141g0020777 Lotus japonicus HOM05D001719 ORTHO05D007646 3.9e-13 77.8 49 71.4
SEGI_27628 Sequoiadendron giganteum HOM05D001719 ORTHO05D007646 3.9e-13 77.8 49 75.5
Solyc06g030570.3 Solanum lycopersicum HOM05D001719 ORTHO05D007646 3.9e-13 77.8 49 77.6
Sopen06g009920 Solanum pennellii HOM05D001719 ORTHO05D007646 3.9e-13 77.8 49 77.6
FAN01G0725 Fragaria x ananassa HOM05D001719 ORTHO05D007646 5.0e-13 77.4 49 69.4
THA.LOC104810032 Tarenaya hassleriana HOM05D001719 ORTHO05D007646 5.0e-13 77.4 49 77.6
AUR62012094 Chenopodium quinoa HOM05D001719 ORTHO05D007646 6.6e-13 77.0 49 71.4
AUR62039372 Chenopodium quinoa HOM05D001719 ORTHO05D007646 6.6e-13 77.0 49 71.4
Cpa.g.sc1.412 Carica papaya HOM05D001719 ORTHO05D007646 8.6e-13 76.6 49 75.5
THA.LOC104824278 Tarenaya hassleriana HOM05D001719 ORTHO05D007646 8.6e-13 76.6 49 77.6
SMO347G0403 Selaginella moellendorffii HOM05D001719 ORTHO05D007646 1.1e-12 76.3 49 73.5
AagrBONN_evm.TU.Sc2ySwM_228.3216 Anthoceros agrestis HOM05D001719 ORTHO05D007646 4.3e-12 74.3 49 69.4
SGA_v2.0_scaffold426G51503 Striga asiatica HOM05D001719 ORTHO05D007646 4.3e-12 74.3 49 69.4
Zm00001eb362190 Zea mays HOM05D001719 ORTHO05D007646 5.6e-12 73.9 49 67.3
Pp3c6_16060 Physcomitrium patens HOM05D001719 ORTHO05D007646 1.6e-11 72.4 49 63.3
Mapoly0005s0156 Marchantia polymorpha HOM05D001719 ORTHO05D007646 2.1e-11 72.0 49 69.4
Zm00001eb138990 Zea mays HOM05D001719 ORTHO05D033216 2.8e-11 71.6 49 65.3
CBR_g41638 Chara braunii HOM05D001719 ORTHO05D007646 2.3e-10 68.6 49 67.3
vmacro07175 Vaccinium macrocarpon HOM05D001719 ORTHO05D007646 4.0e-10 67.8 60 58.3
MCO05G433 Micromonas commoda HOM05D001719 ORTHO05D007646 1.2e-09 66.2 49 59.2
Dinv26021 Davidia involucrata HOM05D001719 ORTHO05D007646 1.3e-08 62.8 34 88.2
Potri.010G203300 Populus trichocarpa HOM05D001719 ORTHO05D007646 1.3e-08 62.8 36 80.6
Sabra10G0156800 Salix brachista HOM05D001719 ORTHO05D033216 2.2e-08 62.0 34 82.4
VMungo0464G0092 Vigna mungo HOM05D001719 ORTHO05D018240 2.9e-08 61.6 49 63.3
Zm00001eb179610 Zea mays HOM05D001719 ORTHO05D007646 1.9e-07 58.9 38 73.7
MCO03G412 Micromonas commoda HOM05D001719 ORTHO05D007646 6.0e-06 53.9 49 55.1
PRCOL_00003727 Prasinoderma coloniale HOM05D001719 ORTHO05D007646 6.0e-06 53.9 49 55.1


User provided reference genes

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