Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p61850 Brassica napus HOM05D001670 ORTHO05D002980 5.1e-168 594.3 305 100.0
BolC4t27667H Brassica oleracea HOM05D001670 ORTHO05D002980 1.6e-166 589.3 305 99.3
BcaC02g07928 Brassica carinata HOM05D001670 ORTHO05D002980 4.6e-153 544.7 305 93.8
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 9.4e-138 493.8 318 83.6
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 2.1e-137 492.7 327 82.6
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 6.1e-137 491.1 323 83.9
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 6.1e-137 491.1 318 84.0
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 6.1e-137 491.1 318 84.0
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 1.4e-136 490.0 327 81.3
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 8.8e-136 487.3 326 81.9
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 1.3e-134 483.4 327 81.0
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 4.1e-133 478.4 326 80.1
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 9.1e-133 477.2 326 80.1
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 2.7e-132 475.7 326 79.8
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 3.5e-132 475.3 327 79.2
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 4.5e-132 474.9 326 79.8
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 4.5e-132 474.9 326 79.8
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.2e-129 466.8 327 79.5
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 2.1e-129 466.1 324 79.6
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 8.0e-129 464.2 327 77.4
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 8.3e-126 454.1 327 77.1
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 8.3e-126 454.1 327 77.1
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 1.6e-124 449.9 327 77.7
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 5.9e-124 448.0 327 76.1
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 5.9e-124 448.0 327 76.1
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 5.5e-122 441.4 327 75.8
A04p24880 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-121 439.5 307 77.9
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 4.0e-112 408.7 301 72.8
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.5e-111 406.8 309 73.8
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 1.4e-93 347.1 324 61.7
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 9.2e-93 344.4 308 62.7
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 9.2e-93 344.4 308 62.7
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 1.2e-92 344.0 314 60.8
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.6e-92 343.6 311 62.7
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 2.1e-92 343.2 308 62.7
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 1.3e-91 340.5 311 61.4
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 1.7e-91 340.1 306 62.7
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 5.1e-91 338.6 302 62.9
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 6.6e-91 338.2 310 59.7
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.6e-91 337.8 309 62.5
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 1.1e-90 337.4 304 62.2
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.1e-90 337.4 326 60.1
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.1e-90 337.4 326 60.1
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 2.5e-90 336.3 313 62.0
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 3.3e-90 335.9 317 58.4
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 4.3e-90 335.5 301 61.5
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 7.3e-90 334.7 318 59.4
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 9.5e-90 334.3 299 60.5
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 2.1e-89 333.2 310 60.3
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 2.8e-89 332.8 302 61.3
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 3.6e-89 332.4 304 60.9
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 4.7e-89 332.0 310 61.0
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 6.2e-89 331.6 308 60.7
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 2.3e-88 329.7 310 60.3
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 3.1e-88 329.3 317 58.0
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 4.0e-88 328.9 316 59.2
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 1.5e-87 327.0 310 60.0
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 2.0e-87 326.6 297 61.6
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 3.4e-87 325.9 312 59.6
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 4.4e-87 325.5 288 63.5
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 4.9e-86 322.0 325 58.5
BcaB06g28670 Brassica carinata HOM05D001670 ORTHO05D002980 8.4e-86 321.2 193 87.6
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 2.4e-85 319.7 312 58.0
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 4.1e-85 318.9 305 59.7
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 7.1e-85 318.2 312 57.4
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.6e-84 317.0 312 57.4
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 3.5e-84 315.8 311 57.9
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 4.6e-84 315.5 312 57.1
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 4.6e-84 315.5 318 56.3
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 6.0e-84 315.1 308 58.1
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.7e-83 313.5 310 60.6
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 6.6e-83 311.6 307 59.9
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.5e-82 310.5 310 60.6
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 2.5e-82 309.7 291 59.1
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 2.5e-82 309.7 310 60.6
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.5e-82 309.7 310 60.6
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.5e-82 309.7 310 60.6
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.5e-82 309.7 310 60.6
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.5e-82 309.7 310 60.6
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 2.5e-82 309.7 299 58.5
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 4.3e-82 308.9 307 59.9
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 9.6e-82 307.8 293 60.4
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 2.8e-81 306.2 304 57.9
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 3.6e-81 305.8 305 55.7
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 6.2e-81 305.1 311 59.8
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 6.2e-81 305.1 310 55.8
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 8.1e-81 304.7 299 58.5
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 1.4e-80 303.9 307 58.6
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 1.8e-80 303.5 304 58.2
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 4.0e-80 302.4 330 54.8
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 4.0e-80 302.4 299 58.2
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 5.2e-80 302.0 293 59.4
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.5e-79 300.4 301 54.5
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.6e-79 299.7 294 60.9
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.6e-79 299.7 294 60.9
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 4.4e-79 298.9 294 56.8
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 5.8e-79 298.5 294 59.5
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 5.8e-79 298.5 293 58.7
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 2.2e-78 296.6 257 61.5
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.1e-77 294.3 257 61.1
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 1.1e-77 294.3 324 52.2
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.4e-77 293.9 321 55.1
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 2.4e-77 293.1 311 55.0
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 5.4e-77 292.0 315 55.6
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.6e-76 290.4 318 51.6
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 2.1e-76 290.0 313 54.3
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 6.0e-76 288.5 284 57.7
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 1.7e-75 287.0 300 57.3
Hma1.2p1_0341F.1_g130250 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 1.1e-74 284.3 301 53.8
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 1.9e-74 283.5 305 54.1
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 2.5e-74 283.1 305 54.8
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 5.6e-74 282.0 285 55.1
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 7.3e-74 281.6 299 54.8
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 7.3e-74 281.6 290 58.6
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 7.3e-74 281.6 301 54.5
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 9.6e-74 281.2 303 55.1
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.3e-73 280.8 293 57.3
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 2.8e-73 279.6 284 54.9
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 3.6e-73 279.3 286 55.6
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 1.4e-72 277.3 273 58.2
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 9.0e-72 274.6 302 51.7
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.5e-71 273.9 265 54.7
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 7.6e-71 271.6 290 55.2
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 3.8e-70 269.2 291 52.9
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 4.9e-70 268.9 300 53.3
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 4.9e-70 268.9 308 53.9
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 8.4e-70 268.1 303 50.8
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 3.2e-69 266.2 297 51.2
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 6.0e-68 261.9 244 57.8
SHI13578 Sapria himalayana HOM05D001670 ORTHO05D002980 2.5e-66 256.5 307 48.5
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 1.3e-65 254.2 297 50.2
CSS0045045 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 5.3e-64 248.8 289 52.6
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 2.0e-63 246.9 305 48.9
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 4.2e-61 239.2 320 45.3
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.2e-60 237.7 213 62.9
Haze_02722 Corylus avellana HOM05D001670 ORTHO05D002980 2.1e-60 236.9 183 70.5
CARHR248060 Cardamine hirsuta HOM05D001670 ORTHO05D002980 4.6e-60 235.7 183 69.4
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 1.3e-59 234.2 245 54.3
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 3.9e-59 232.6 271 47.6
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 4.3e-58 229.2 274 49.3
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 1.4e-56 224.2 284 44.7
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 6.9e-56 221.9 213 57.3
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 1.5e-55 220.7 225 56.0
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.5e-55 220.7 227 54.6
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 6.5e-54 215.3 261 46.4
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 8.4e-54 214.9 295 44.1
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 4.2e-53 212.6 292 45.2
Thecc.03G154200 Theobroma cacao HOM05D001670 ORTHO05D002980 4.2e-53 212.6 241 51.5
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 4.2e-53 212.6 294 44.9
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 3.0e-51 206.5 283 43.8
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 5.1e-51 205.7 186 62.9
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 8.7e-51 204.9 238 47.5
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 5.7e-50 202.2 229 52.8
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 7.6e-47 191.8 266 44.7
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 2.0e-39 167.2 251 39.8
Zm00001eb177620 Zea mays HOM05D001670 ORTHO05D002980 2.6e-39 166.8 217 43.8
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 9.4e-37 158.3 158 53.2
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 4.6e-36 156.0 210 42.4
Cpa.g.sc212.1 Carica papaya HOM05D001670 ORTHO05D002980 6.7e-35 152.1 148 58.1
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 2.0e-34 150.6 193 45.1
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.8e-32 144.1 180 47.8
ECA234G2815 Erigeron canadensis HOM05D001670 ORTHO05D002980 3.4e-31 139.8 221 43.0
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 8.5e-30 135.2 139 57.6
Zm00001eb235140 Zea mays HOM05D001670 ORTHO05D002980 1.6e-28 131.0 169 45.6
Actinidia20646 Actinidia chinensis HOM05D001670 ORTHO05D010670 6.7e-27 125.6 201 43.3
Aqoxy1G02768 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 8.8e-27 125.2 121 57.0
Os03g0102333 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 8.8e-27 125.2 205 35.6
Zm00001eb382550 Zea mays HOM05D001670 ORTHO05D002980 2.6e-26 123.6 131 46.6
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 3.1e-24 116.7 179 41.3
HanXRQChr16g0519701 Helianthus annuus HOM05D001670 ORTHO05D002980 4.5e-23 112.8 115 51.3
Actinidia00125 Actinidia chinensis HOM05D001670 ORTHO05D002980 5.9e-23 112.5 80 71.2
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 7.7e-23 112.1 140 47.1
Actinidia20643 Actinidia chinensis HOM05D001670 ORTHO05D010670 1.2e-20 104.8 184 40.8
Actinidia12670 Actinidia chinensis HOM05D001670 ORTHO05D002980 2.0e-15 87.4 87 55.2
Actinidia00127 Actinidia chinensis HOM05D001670 ORTHO05D002980 1.0e-14 85.1 130 43.8
Rhsim03G0123200 Rhododendron simsii HOM05D001670 ORTHO05D002980 2.2e-14 84.0 157 35.7
Actinidia00124 Actinidia chinensis HOM05D001670 ORTHO05D010670 3.8e-14 83.2 101 48.5
MD07G1112600 Malus domestica HOM05D001670 ORTHO05D002980 6.5e-14 82.4 77 58.4
Zm00001eb308110 Zea mays HOM05D001670 ORTHO05D002980 9.4e-13 78.6 64 56.2
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 1.6e-12 77.8 206 32.0
Zm00001eb208300 Zea mays HOM05D001670 ORTHO05D002980 2.7e-12 77.0 64 54.7
Zm00001eb134440 Zea mays HOM05D001670 ORTHO05D002980 3.6e-12 76.6 64 54.7
Actinidia20644 Actinidia chinensis HOM05D001670 ORTHO05D015800 2.6e-10 70.5 46 78.3
Haze_02721 Corylus avellana HOM05D001670 ORTHO05D002980 2.8e-09 67.0 63 52.4
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 1.6e-07 61.2 63 55.6
Actinidia20090 Actinidia chinensis HOM05D001670 ORTHO05D002980 1.0e-06 58.5 48 62.5


User provided reference genes

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