Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p58510 Brassica napus HOM05D003452 ORTHO05D004046 2.6e-62 241.9 122 100.0
BolC3t18112H Brassica oleracea HOM05D003452 ORTHO05D004046 2.6e-62 241.9 122 100.0
BcaB01g04320 Brassica carinata HOM05D003452 ORTHO05D004046 1.7e-45 186.0 115 84.3
C03p16820 Brassica napus HOM05D003452 ORTHO05D004046 4.6e-43 177.9 114 80.7
BcaC01g06323 Brassica carinata HOM05D003452 ORTHO05D004046 6.6e-42 174.1 114 79.8
BolC3t14104H Brassica oleracea HOM05D003452 ORTHO05D004046 1.1e-41 173.3 105 82.9
C07p61910 Brassica napus HOM05D003452 ORTHO05D004046 2.6e-30 135.6 93 76.3
BolC7t46612H Brassica oleracea HOM05D003452 ORTHO05D004046 2.6e-30 135.6 93 76.3
A06p33830 Brassica napus HOM05D003452 ORTHO05D004046 9.9e-30 133.7 68 94.1
BraA06t26314Z Brassica rapa HOM05D003452 ORTHO05D004046 9.9e-30 133.7 68 94.1
Carub.0006s0444 Capsella rubella HOM05D003452 ORTHO05D004046 1.3e-24 116.7 104 62.5
AL6G15430 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 3.6e-24 115.2 103 60.2
Thhalv10024938m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 4.0e-23 111.7 134 50.7
AT3G50100 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 5.3e-23 111.3 122 49.2
Sp7g29190 Schrenkiella parvula HOM05D003452 ORTHO05D004046 9.0e-23 110.5 101 57.4
AL5G30220 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 1.2e-22 110.2 122 48.4
CARHR207730 Cardamine hirsuta HOM05D003452 ORTHO05D004046 1.5e-22 109.8 103 56.3
AT5G05540 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 3.4e-22 108.6 103 57.3
Sp7g29060 Schrenkiella parvula HOM05D003452 ORTHO05D004046 3.4e-22 108.6 103 56.3
Thhalv10003942m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 7.6e-22 107.5 100 56.0
Carub.0005s1644 Capsella rubella HOM05D003452 ORTHO05D004046 2.9e-21 105.5 122 48.4
THA.LOC104805170 Tarenaya hassleriana HOM05D003452 ORTHO05D004046 2.9e-21 105.5 101 54.5
THA.LOC104827394 Tarenaya hassleriana HOM05D003452 ORTHO05D004046 4.9e-21 104.8 101 54.5
Aa31LG1G15770 Aethionema arabicum HOM05D003452 ORTHO05D004046 1.1e-20 103.6 121 49.6
Sp5g12020 Schrenkiella parvula HOM05D003452 ORTHO05D004046 1.9e-20 102.8 121 47.9
BraA09t39792Z Brassica rapa HOM05D003452 ORTHO05D004046 3.2e-20 102.1 121 46.3
Sp2g29430 Schrenkiella parvula HOM05D003452 ORTHO05D004046 3.2e-20 102.1 101 54.5
Ciclev10025436m.g Citrus clementina HOM05D003452 ORTHO05D004046 7.1e-20 100.9 102 52.9
A09p43220 Brassica napus HOM05D003452 ORTHO05D004046 9.3e-20 100.5 121 46.3
CARHR239210 Cardamine hirsuta HOM05D003452 ORTHO05D004046 1.2e-19 100.1 113 51.3
AL8G44100 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 4.6e-19 98.2 100 53.0
CSS0049847 Camellia sinensis var. sinensis HOM05D003452 ORTHO05D004046 4.6e-19 98.2 92 55.4
CiPaw.02G006400 Carya illinoinensis HOM05D003452 ORTHO05D004046 4.6e-19 98.2 106 50.9
Thhalv10011012m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 4.6e-19 98.2 121 45.5
BcaC07g39477 Brassica carinata HOM05D003452 ORTHO05D004046 1.0e-18 97.1 121 45.5
BolC8t50143H Brassica oleracea HOM05D003452 ORTHO05D004046 1.0e-18 97.1 121 45.5
Cfa004056 Carpinus fangiana HOM05D003452 ORTHO05D004046 1.0e-18 97.1 103 50.5
ClCG01G017040 Citrullus lanatus HOM05D003452 ORTHO05D004046 3.0e-18 95.5 92 55.4
QL12p009800 Quercus lobata HOM05D003452 ORTHO05D004046 3.0e-18 95.5 122 48.4
Atru.chr3.258 Acer truncatum HOM05D003452 ORTHO05D004046 3.9e-18 95.1 102 50.0
Cc07_g06390 Coffea canephora HOM05D003452 ORTHO05D004046 5.1e-18 94.7 114 47.4
CsaV3_6G043510 Cucumis sativus L. HOM05D003452 ORTHO05D004046 5.1e-18 94.7 92 55.4
Eucgr.I00803 Eucalyptus grandis HOM05D003452 ORTHO05D004046 6.6e-18 94.4 103 51.5
TWI73G0964 Tripterygium wilfordii HOM05D003452 ORTHO05D004046 6.6e-18 94.4 121 47.1
Actinidia36467 Actinidia chinensis HOM05D003452 ORTHO05D004046 8.7e-18 94.0 103 50.5
C08p25210 Brassica napus HOM05D003452 ORTHO05D004046 8.7e-18 94.0 121 44.6
Carub.0008s2727 Capsella rubella HOM05D003452 ORTHO05D004046 8.7e-18 94.0 100 51.0
Thhalv10010950m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 8.7e-18 94.0 101 49.5
CAN.G1778.2 Capsicum annuum HOM05D003452 ORTHO05D004046 1.1e-17 93.6 114 46.5
DCAR_010856 Daucus carota HOM05D003452 ORTHO05D004046 1.1e-17 93.6 103 50.5
PGSC0003DMG400010461 Solanum tuberosum HOM05D003452 ORTHO05D004046 1.1e-17 93.6 103 53.4
BcaB02g09943 Brassica carinata HOM05D003452 ORTHO05D004046 1.9e-17 92.8 99 51.5
BcaC06g34807 Brassica carinata HOM05D001905 ORTHO05D001820 1.9e-17 92.8 99 51.5
MELO3C007581.2 Cucumis melo HOM05D003452 ORTHO05D004046 1.9e-17 92.8 92 54.3
Nitab4.5_0001297g0030 Nicotiana tabacum HOM05D003452 ORTHO05D004046 1.9e-17 92.8 114 46.5
Sc18g0004770 Simmondsia chinensis HOM05D003452 ORTHO05D004046 1.9e-17 92.8 114 46.5
CARHR280390 Cardamine hirsuta HOM05D003452 ORTHO05D004046 2.5e-17 92.4 109 46.8
PGR004G0567 Punica granatum HOM05D003452 ORTHO05D004046 2.5e-17 92.4 126 45.2
Actinidia12025 Actinidia chinensis HOM05D003452 ORTHO05D004046 5.6e-17 91.3 103 48.5
Dinv26859 Davidia involucrata HOM05D003452 ORTHO05D004046 5.6e-17 91.3 106 49.1
PSO210G3568 Papaver somniferum HOM05D003452 ORTHO05D004046 5.6e-17 91.3 89 55.1
Sed0010356 Sechium edule HOM05D003452 ORTHO05D004046 5.6e-17 91.3 141 41.1
Nitab4.5_0001192g0060 Nicotiana tabacum HOM05D003452 ORTHO05D004046 9.6e-17 90.5 114 45.6
Solyc10g084160.2 Solanum lycopersicum HOM05D003452 ORTHO05D004046 9.6e-17 90.5 114 47.4
GSVIVG01000228001 Vitis vinifera HOM05D003452 ORTHO05D004046 9.6e-17 90.5 106 46.2
BcaB01g00639 Brassica carinata HOM05D003452 ORTHO05D004046 1.6e-16 89.7 146 39.0
Sopen10g033610 Solanum pennellii HOM05D003452 ORTHO05D004046 2.1e-16 89.4 114 46.5
SGA_v2.0_scaffold15G07361 Striga asiatica HOM05D003452 ORTHO05D004046 2.1e-16 89.4 102 51.0
MSTRG.2860 Avicennia marina HOM05D003452 ORTHO05D004046 2.8e-16 89.0 121 48.8
Nn5g30393 Nelumbo nucifera HOM05D003452 ORTHO05D004046 2.8e-16 89.0 120 46.7
Hma1.2p1_0017F.1_g011830 Hydrangea macrophylla HOM05D003452 ORTHO05D004046 3.6e-16 88.6 114 44.7
Potri.007G048000 Populus trichocarpa HOM05D003452 ORTHO05D004046 4.8e-16 88.2 89 52.8
BcaC09g50010 Brassica carinata HOM05D003452 ORTHO05D004046 6.2e-16 87.8 101 47.5
A07p16710 Brassica napus HOM05D001905 ORTHO05D001820 6.2e-16 87.8 99 51.5
C01p30070 Brassica napus HOM05D003452 ORTHO05D004046 6.2e-16 87.8 101 47.5
BolC1t02949H Brassica oleracea HOM05D003452 ORTHO05D004046 6.2e-16 87.8 101 47.5
PSO170G4023 Papaver somniferum HOM05D003452 ORTHO05D004046 6.2e-16 87.8 103 49.5
RcHm_v2.0_Chr2g0106501 Rosa chinensis HOM05D003452 ORTHO05D004046 6.2e-16 87.8 103 48.5
AL5G30210 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 8.1e-16 87.4 87 54.0
Lj4A155G89 Lonicera japonica HOM05D003452 ORTHO05D004046 8.1e-16 87.4 91 56.0
Sabra07G0043000 Salix brachista HOM05D003452 ORTHO05D004046 8.1e-16 87.4 106 47.2
unitig_744.g24372 Utricularia gibba HOM05D003452 ORTHO05D004046 8.1e-16 87.4 119 42.0
Peaxi162Scf00472g00008 Petunia axillaris HOM05D003452 ORTHO05D004046 1.1e-15 87.0 114 45.6
HanXRQChr11g0348391 Helianthus annuus HOM05D003452 ORTHO05D004046 1.8e-15 86.3 105 49.5
Nitab4.5_0001238g0020 Nicotiana tabacum HOM05D003452 ORTHO05D004046 1.8e-15 86.3 114 44.7
TAR381G1138 Trochodendron aralioides HOM05D003452 ORTHO05D004046 1.8e-15 86.3 103 47.6
Manes.12G151100 Manihot esculenta HOM05D003452 ORTHO05D004046 3.1e-15 85.5 103 46.6
Nitab4.5_0007967g0050 Nicotiana tabacum HOM05D003452 ORTHO05D004046 3.1e-15 85.5 114 43.0
BcaB05g23189 Brassica carinata HOM05D003452 ORTHO05D004046 4.0e-15 85.1 101 44.6
Prupe.6G230000 Prunus persica HOM05D003452 ORTHO05D004046 4.0e-15 85.1 103 48.5
vmacro05258 Vaccinium macrocarpon HOM05D003452 ORTHO05D004046 5.3e-15 84.7 110 46.4
Aqoxy6G02896 Aquilegia oxysepala HOM05D003452 ORTHO05D004046 6.9e-15 84.3 103 46.6
Lj7A76T78 Lonicera japonica HOM05D003452 ORTHO05D004046 6.9e-15 84.3 92 53.3
Lj7A83T65 Lonicera japonica HOM05D003452 ORTHO05D004046 6.9e-15 84.3 106 49.1
BraA01t02340Z Brassica rapa HOM05D003452 ORTHO05D004046 9.0e-15 84.0 101 46.5
AT5G67240 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 1.5e-14 83.2 100 49.0
CAN.G1778.3 Capsicum annuum HOM05D003452 ORTHO05D004046 1.5e-14 83.2 92 50.0
ECA246G2207 Erigeron canadensis HOM05D003452 ORTHO05D004046 1.5e-14 83.2 103 46.6
Oeu049888.1 Olea europaea HOM05D003452 ORTHO05D004046 1.5e-14 83.2 102 50.0
BcaB02g10837 Brassica carinata HOM05D003452 ORTHO05D093858 2.6e-14 82.4 77 58.4
Migut.H00401 Erythranthe guttata HOM05D003452 ORTHO05D004046 3.4e-14 82.0 84 56.0
Aqoxy2G00584 Aquilegia oxysepala HOM05D003452 ORTHO05D004046 7.6e-14 80.9 99 47.5
AT3G50090 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 7.6e-14 80.9 85 52.9
CSS0011108 Camellia sinensis var. sinensis HOM05D003452 ORTHO05D004046 7.6e-14 80.9 92 50.0
Hund13910 Selenicereus undatus HOM05D003452 ORTHO05D004046 7.6e-14 80.9 115 44.3
FvH4_1g16590 Fragaria vesca HOM05D003452 ORTHO05D004046 9.9e-14 80.5 92 48.9
Oeu008437.1 Olea europaea HOM05D003452 ORTHO05D004046 9.9e-14 80.5 102 48.0
Thecc.01G062600 Theobroma cacao HOM05D003452 ORTHO05D004046 9.9e-14 80.5 131 42.7
CDE10G0659 Ceratophyllum demersum HOM05D003452 ORTHO05D004046 1.3e-13 80.1 102 45.1
C07p61850 Brassica napus HOM05D003452 ORTHO05D032236 1.7e-13 79.7 118 42.4
MD15G1287900 Malus domestica HOM05D003452 ORTHO05D004046 2.2e-13 79.3 92 47.8
Gohir.D11G232800 Gossypium hirsutum HOM05D003452 ORTHO05D004046 3.8e-13 78.6 89 53.9
Gorai.003G066000 Gossypium raimondii HOM05D003452 ORTHO05D004046 3.8e-13 78.6 89 53.9
Haze_15356 Corylus avellana HOM05D003452 ORTHO05D004046 8.4e-13 77.4 101 43.6
Duzib147G1492 Durio zibethinus HOM05D003452 ORTHO05D004046 8.4e-13 77.4 136 41.2
Lalb_Chr16g0378691 Lupinus albus HOM05D003452 ORTHO05D004046 1.1e-12 77.0 98 45.9
Lj1g0003061 Lotus japonicus HOM05D003452 ORTHO05D004046 1.4e-12 76.6 119 37.8
Lj5g0005600 Lotus japonicus HOM05D003452 ORTHO05D004046 1.4e-12 76.6 119 37.8
MD02G1178000 Malus domestica HOM05D003452 ORTHO05D004046 1.9e-12 76.3 103 44.7
SEGI_05143 Sequoiadendron giganteum HOM05D003452 ORTHO05D004046 1.9e-12 76.3 104 40.4
PSO447G0386 Papaver somniferum HOM05D003452 ORTHO05D004046 2.4e-12 75.9 98 45.9
Lalb_Chr05g0226301 Lupinus albus HOM05D003452 ORTHO05D004046 3.2e-12 75.5 106 42.5
ATR0006G091 Amborella trichopoda HOM05D003452 ORTHO05D004046 4.2e-12 75.1 109 45.9
Ca_13403_v3 Cicer arietinum L. HOM05D003452 ORTHO05D004046 4.2e-12 75.1 101 44.6
Gohir.A11G230304 Gossypium hirsutum HOM05D003452 ORTHO05D004046 4.2e-12 75.1 89 52.8
Lalb_Chr09g0323371 Lupinus albus HOM05D003452 ORTHO05D004046 7.1e-12 74.3 98 44.9
TPR.G34364 Trifolium pratense HOM05D003452 ORTHO05D004046 7.1e-12 74.3 119 40.3
AUR62003930 Chenopodium quinoa HOM05D003452 ORTHO05D004046 9.3e-12 73.9 129 38.8
PSO700G0024 Papaver somniferum HOM05D003452 ORTHO05D004046 9.3e-12 73.9 98 43.9
EL10Ac6g15698 Beta vulgaris HOM05D003452 ORTHO05D004046 1.2e-11 73.6 123 39.0
Phvul.003G240600 Phaseolus vulgaris HOM05D003452 ORTHO05D004046 2.1e-11 72.8 120 40.0
Medtr1g023955 Medicago truncatula HOM05D003452 ORTHO05D004046 2.7e-11 72.4 105 41.9
Glyma.17G167900 Glycine max HOM05D003452 ORTHO05D004046 4.6e-11 71.6 101 42.6
A01p37890 Brassica napus HOM05D001353 ORTHO05D005187 1.0e-10 70.5 62 71.0
BcaC09g48590 Brassica carinata HOM05D023356 ORTHO05D027590 2.3e-10 69.3 40 87.5
BolC1t04775H Brassica oleracea HOM05D023356 ORTHO05D027590 2.3e-10 69.3 40 87.5
Os04g0650600 Oryza sativa ssp. japonica HOM05D003452 ORTHO05D004046 3.9e-10 68.6 103 39.8
HPP92_021980 Vanilla planifolia HOM05D003452 ORTHO05D004046 3.9e-10 68.6 82 47.6
VMungo0251G0295 Vigna mungo HOM05D003452 ORTHO05D004046 5.1e-10 68.2 99 39.4
BolC1t04774H Brassica oleracea HOM05D023356 ORTHO05D027590 6.7e-10 67.8 40 85.0
Zm00001eb068290 Zea mays HOM05D003452 ORTHO05D004046 1.1e-09 67.0 77 44.2
PSO210G6200 Papaver somniferum HOM05D003452 ORTHO05D004046 2.5e-09 65.9 125 37.6
Mapoly0033s0099 Marchantia polymorpha HOM05D003452 ORTHO05D004046 3.3e-09 65.5 114 38.6
Lsat_1_v5_gn_3_90381 Lactuca sativa HOM05D003452 ORTHO05D004046 4.3e-09 65.1 89 42.7
A01p24270 Brassica napus HOM05D003452 ORTHO05D004046 5.6e-09 64.7 90 42.2
PSO384G3646 Papaver somniferum HOM05D003452 ORTHO05D004046 9.6e-09 63.9 100 43.0
PSO210G5185 Papaver somniferum HOM05D003452 ORTHO05D004046 1.3e-08 63.5 94 43.6
PSO339G0322 Papaver somniferum HOM05D003452 ORTHO05D004046 1.3e-08 63.5 100 44.0
Ca_13416_v3 Cicer arietinum L. HOM05D003452 ORTHO05D004046 1.6e-08 63.2 99 39.4
PSO170G2906 Papaver somniferum HOM05D003452 ORTHO05D004046 2.1e-08 62.8 50 64.0
Zm00001eb110230 Zea mays HOM05D003452 ORTHO05D004046 2.1e-08 62.8 108 36.1
Psat6g004200 Pisum sativum HOM05D003452 ORTHO05D004046 2.8e-08 62.4 106 37.7
C01p30090 Brassica napus HOM05D003452 ORTHO05D004046 1.8e-07 59.7 87 42.5
FAN28G2117 Fragaria x ananassa HOM05D003452 ORTHO05D004046 1.8e-07 59.7 149 33.6
Pp3c18_20990 Physcomitrium patens HOM05D003452 ORTHO05D004046 3.1e-07 58.9 103 38.8
AagrBONN_evm.TU.Sc2ySwM_369.314 Anthoceros agrestis HOM05D003452 ORTHO05D004046 4.0e-07 58.5 95 36.8
AL6G18830 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 4.0e-07 58.5 45 62.2
SMO116G0328 Selaginella moellendorffii HOM05D003452 ORTHO05D004046 4.0e-07 58.5 76 40.8
CBR_g16947 Chara braunii HOM05D003452 ORTHO05D004046 5.3e-07 58.2 77 42.9
BolC1t02953H Brassica oleracea HOM05D003452 ORTHO05D004046 1.2e-06 57.0 87 40.2
FAN19G1474 Fragaria x ananassa HOM05D003452 ORTHO05D004046 7.6e-06 54.3 92 38.0
FAN23G2911 Fragaria x ananassa HOM05D003452 ORTHO05D004046 7.6e-06 54.3 103 35.0


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