Gene: CSS0049847
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0049847
- Transcript Identifier CSS0049847.1
- Gene Type Coding gene
- Location Chr1 : 126171341-126186528 : negative
Gene Family Information
- ID HOM05D003452
- #Genes/#Species 198/94
- Phylogenetic origin
- ID ORTHO05D004046
- #Genes/#Species 193/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0049847.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010587 | ISO | PLAZA Integrative Orthology | miRNA catabolic process | AT3G50100 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0035198 | ISO | PLAZA Integrative Orthology | miRNA binding | AT3G50100 |
GO:0044748 | ISO | PLAZA Integrative Orthology | 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing | AT3G50100 |
GO:0008408 | ISO | PLAZA Integrative Orthology | 3'-5' exonuclease activity | AT3G50100 |
GO:0000175 | ISO | PLAZA Integrative Orthology | 3'-5'-exoribonuclease activity | AT3G50100 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G50100 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT5G67240 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.9.2.6 | RNA processing.mRNA silencing.miRNA pathway.miRNA nuclease (SDN1) |