Gene: Zm00001eb068290

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb068290
  • Transcript Identifier Zm00001eb068290_T001
  • Gene Type Coding gene
  • Location 2 : 5294961-5298700 : positive

Gene Family Information

  • ID HOM05D003452
  • #Genes/#Species 198/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb068290_T001
  • pid Zm00001eb068290_P001
  • uniprot A0A3L6G5G7
  • uniprot A0A1D6DW13
  • V4_identifier Zm00001d002053

Descriptions

  • Description Zm00001e006731
  • Description Small RNA degrading nuclease 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0010587
ISO
PLAZA Integrative OrthologymiRNA catabolic process AT3G50100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004527
IBA
GOA Databaseexonuclease activity
GO:0035198
ISO
PLAZA Integrative OrthologymiRNA binding AT3G50100
GO:0044748
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing AT3G50100
GO:0008408
ISO
PLAZA Integrative Orthology3'-5' exonuclease activity AT3G50100
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT3G50100
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G50100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT5G67240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR034922 RNA exonuclease 1-like, exonuclease domain
IPR012337 Ribonuclease H-like superfamily
IPR013520 Exonuclease, RNase T/DNA polymerase III
Mapman id Description
16.9.2.6 RNA processing.mRNA silencing.miRNA pathway.miRNA nuclease (SDN1)