Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p15920 Brassica napus HOM05D004593 ORTHO05D003703 3.2e-119 431.8 220 100.0
BolC3t14022H Brassica oleracea HOM05D004593 ORTHO05D003703 2.1e-118 429.1 220 99.5
A03p11320 Brassica napus HOM05D004593 ORTHO05D003703 4.3e-84 315.1 250 71.6
BraA03t10445Z Brassica rapa HOM05D004593 ORTHO05D003703 1.3e-83 313.5 250 71.2
C03p13050 Brassica napus HOM05D004593 ORTHO05D003703 1.6e-83 313.2 250 70.8
A08p10760 Brassica napus HOM05D004593 ORTHO05D003703 2.1e-83 312.8 250 71.2
BraA08t33073Z Brassica rapa HOM05D004593 ORTHO05D003703 2.1e-83 312.8 250 71.2
BraA03t10446Z Brassica rapa HOM05D004593 ORTHO05D003703 1.5e-73 280.0 236 66.9
BraA10t43809Z Brassica rapa HOM05D004593 ORTHO05D003703 1.7e-72 276.6 252 62.3
C09p52610 Brassica napus HOM05D004593 ORTHO05D003703 2.5e-71 272.7 252 60.7
C03p13070 Brassica napus HOM05D004593 ORTHO05D003703 5.5e-71 271.6 222 69.4
A10p17250 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-70 270.4 258 60.1
BolC9t58127H Brassica oleracea HOM05D004593 ORTHO05D003703 1.0e-69 267.3 252 59.9
Thhalv10011949m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 3.0e-69 265.8 254 60.6
BcaNung07341 Brassica carinata HOM05D004593 ORTHO05D003703 3.3e-68 262.3 246 60.2
Thhalv10015510m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 7.4e-68 261.2 252 59.1
A10p17000 Brassica napus HOM05D004593 ORTHO05D003703 9.7e-68 260.8 243 59.7
BolC3t13767H Brassica oleracea HOM05D004593 ORTHO05D003703 6.3e-67 258.1 323 51.1
C09p52250 Brassica napus HOM05D004593 ORTHO05D003703 2.0e-65 253.1 243 59.3
Carub.0008s2083 Capsella rubella HOM05D004593 ORTHO05D003703 1.1e-63 247.3 248 54.4
Carub.0008s2091 Capsella rubella HOM05D004593 ORTHO05D003703 1.0e-61 240.7 248 53.6
AL8G36700 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.1e-60 237.3 252 55.2
AL71U10060 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 2.6e-60 236.1 252 54.8
BcaC04g19627 Brassica carinata HOM05D004593 ORTHO05D003703 3.7e-59 232.3 243 56.8
AT5G60110 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 4.1e-58 228.8 247 52.6
BcaB08g36222 Brassica carinata HOM05D004593 ORTHO05D003703 5.3e-58 228.4 216 58.3
BraA10t43816Z Brassica rapa HOM05D004593 ORTHO05D003703 4.5e-57 225.3 259 54.4
AL8G36790 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.3e-56 223.8 252 53.2
BcaC04g19662 Brassica carinata HOM05D004593 ORTHO05D003703 1.3e-56 223.8 257 54.1
C09p52660 Brassica napus HOM05D004593 ORTHO05D003703 1.3e-56 223.8 257 54.1
BolC9t58133H Brassica oleracea HOM05D004593 ORTHO05D003703 1.3e-56 223.8 257 54.1
CARHR036840 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.2e-56 223.0 259 52.1
AT5G60180 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 7.2e-55 218.0 252 51.2
A10p17310 Brassica napus HOM05D004593 ORTHO05D003703 1.6e-54 216.9 260 53.1
Thhalv10015422m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-53 214.2 260 53.8
Thhalv10016021m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-53 214.2 260 53.8
CARHR183820 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.4e-53 213.8 239 53.6
CARHR273750 Cardamine hirsuta HOM05D004593 ORTHO05D003703 6.7e-53 211.5 248 51.2
CARHR273860 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.9e-48 196.1 248 48.4
Sp1g28540 Schrenkiella parvula HOM05D004593 ORTHO05D003703 1.1e-47 194.1 285 42.8
Sp6g21760 Schrenkiella parvula HOM05D004593 ORTHO05D003703 3.2e-47 192.6 216 52.8
BolC3t13768H Brassica oleracea HOM05D004593 ORTHO05D003703 1.8e-45 186.8 122 80.3
A10p16810 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-44 184.1 284 42.3
AL8G35710 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 7.5e-44 181.4 238 45.8
BcaC04g19751 Brassica carinata HOM05D004593 ORTHO05D003703 3.7e-43 179.1 275 42.5
C09p51990 Brassica napus HOM05D004593 ORTHO05D003703 3.7e-43 179.1 275 42.5
BolC9t58061H Brassica oleracea HOM05D004593 ORTHO05D003703 3.7e-43 179.1 275 42.5
Thhalv10015334m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 3.7e-43 179.1 277 41.2
Thhalv10015341m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 8.2e-43 177.9 278 41.4
Carub.0008s1994 Capsella rubella HOM05D004593 ORTHO05D003703 5.3e-42 175.3 273 41.0
BcaC04g19796 Brassica carinata HOM05D004593 ORTHO05D003703 9.1e-42 174.5 214 47.7
BcaB08g36269 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-41 173.7 263 43.0
BcaB01g06359 Brassica carinata HOM05D004593 ORTHO05D003703 2.0e-41 173.3 122 73.8
AT5G59280 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.7e-41 172.9 256 42.2
C09p51570 Brassica napus HOM05D004593 ORTHO05D003703 3.5e-41 172.6 301 38.9
BolC9t58016H Brassica oleracea HOM05D004593 ORTHO05D003703 3.5e-41 172.6 301 38.9
BraA10t43760Z Brassica rapa HOM05D004593 ORTHO05D003703 2.2e-40 169.9 223 47.1
A10p16490 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-39 167.5 214 46.7
BraA10t43732Z Brassica rapa HOM05D004593 ORTHO05D003703 1.1e-39 167.5 214 46.7
Sp6g20950 Schrenkiella parvula HOM05D004593 ORTHO05D003703 4.2e-39 165.6 294 39.1
CARHR157270 Cardamine hirsuta HOM05D004593 ORTHO05D003703 9.4e-39 164.5 242 40.5
Aa31LG1G12760 Aethionema arabicum HOM05D004593 ORTHO05D003703 1.8e-34 150.2 222 39.2
Thhalv10014036m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-32 144.4 217 45.6
CARHR285940 Cardamine hirsuta HOM05D004593 ORTHO05D003703 6.5e-32 141.7 165 48.5
C03p13480 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-31 141.0 213 42.3
BolC3t13805H Brassica oleracea HOM05D004593 ORTHO05D003703 1.1e-31 141.0 213 42.3
BcaB05g22576 Brassica carinata HOM05D004593 ORTHO05D003703 4.2e-31 139.0 121 63.6
A02p07020 Brassica napus HOM05D004593 ORTHO05D003703 4.2e-31 139.0 225 40.0
AT1G21620 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 7.2e-31 138.3 234 41.0
BraA02t05782Z Brassica rapa HOM05D004593 ORTHO05D003703 9.5e-31 137.9 225 40.0
BcaC03g13997 Brassica carinata HOM05D004593 ORTHO05D003703 2.1e-30 136.7 225 39.6
C02p12360 Brassica napus HOM05D004593 ORTHO05D003703 2.1e-30 136.7 225 39.6
BolC2t07336H Brassica oleracea HOM05D004593 ORTHO05D003703 2.1e-30 136.7 225 39.6
BcaB01g04566 Brassica carinata HOM05D004593 ORTHO05D003703 6.1e-30 135.2 252 38.1
AT1G35850 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.3e-29 133.3 233 38.6
Sp6g21310 Schrenkiella parvula HOM05D004593 ORTHO05D003703 2.3e-29 133.3 255 36.5
Sp6g21810 Schrenkiella parvula HOM05D004593 ORTHO05D003703 3.0e-29 132.9 103 65.0
BcaC01g06509 Brassica carinata HOM05D004593 ORTHO05D003703 6.8e-29 131.7 239 39.7
BcaB05g22526 Brassica carinata HOM05D004593 ORTHO05D003703 8.8e-29 131.3 221 39.8
A10p16850 Brassica napus HOM05D004593 ORTHO05D003703 1.5e-28 130.6 227 40.1
BraA10t43763Z Brassica rapa HOM05D004593 ORTHO05D003703 1.5e-28 130.6 227 39.6
BcaB01g04563 Brassica carinata HOM05D004593 ORTHO05D003703 3.4e-28 129.4 216 41.7
BcaC01g06510 Brassica carinata HOM05D004593 ORTHO05D003703 4.4e-28 129.0 210 42.4
Aa31LG1G11610 Aethionema arabicum HOM05D004593 ORTHO05D003703 9.8e-28 127.9 212 36.8
BolC3t13804H Brassica oleracea HOM05D004593 ORTHO05D003703 9.8e-28 127.9 202 43.6
C03p13470 Brassica napus HOM05D004593 ORTHO05D003703 1.4e-26 124.0 210 41.9
A03p11590 Brassica napus HOM05D004593 ORTHO05D003703 4.1e-26 122.5 210 40.5
BcaB08g36241 Brassica carinata HOM05D004593 ORTHO05D003703 5.4e-26 122.1 220 39.1
C03p13530 Brassica napus HOM05D004593 ORTHO05D003703 5.4e-26 122.1 212 41.5
BraA03t10472Z Brassica rapa HOM05D004593 ORTHO05D003703 9.2e-26 121.3 213 39.9
C03p13460 Brassica napus HOM05D004593 ORTHO05D003703 3.5e-25 119.4 212 38.2
BolC3t13808H Brassica oleracea HOM05D004593 ORTHO05D003703 3.5e-25 119.4 212 41.0
BolC3t13803H Brassica oleracea HOM05D004593 ORTHO05D003703 4.5e-25 119.0 219 37.0
BolC9t58062H Brassica oleracea HOM05D004593 ORTHO05D003703 4.5e-25 119.0 214 40.7
BcaB08g36239 Brassica carinata HOM05D004593 ORTHO05D003703 1.3e-24 117.5 195 41.5
BcaB08g36242 Brassica carinata HOM05D004593 ORTHO05D003703 1.3e-24 117.5 123 54.5
BcaC01g06512 Brassica carinata HOM05D004593 ORTHO05D003703 1.3e-24 117.5 212 40.6
A03p11600 Brassica napus HOM05D004593 ORTHO05D003703 1.7e-24 117.1 213 39.4
BraA03t10473Z Brassica rapa HOM05D004593 ORTHO05D003703 2.9e-24 116.3 213 39.4
BraA03t10471Z Brassica rapa HOM05D004593 ORTHO05D003703 3.8e-24 115.9 225 37.8
BraA10t43762Z Brassica rapa HOM05D004593 ORTHO05D003703 8.6e-24 114.8 216 39.4
C09p52000 Brassica napus HOM05D004593 ORTHO05D003703 1.5e-23 114.0 194 42.3
A03p11580 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-23 113.6 225 37.3
BcaB08g36243 Brassica carinata HOM05D004593 ORTHO05D003703 3.3e-23 112.8 215 38.1
SpUn1070_0010 Schrenkiella parvula HOM05D004593 ORTHO05D003703 3.3e-23 112.8 97 62.9
BcaB05g22575 Brassica carinata HOM05D004593 ORTHO05D003703 7.3e-23 111.7 103 57.3
A10p16840 Brassica napus HOM05D004593 ORTHO05D003703 9.5e-23 111.3 222 39.2
BcaC04g19750 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-22 110.5 215 38.1
C09p52010 Brassica napus HOM05D004593 ORTHO05D003703 1.6e-22 110.5 215 38.1
BolC9t58063H Brassica oleracea HOM05D004593 ORTHO05D003703 1.6e-22 110.5 215 38.1
BcaC01g06511 Brassica carinata HOM05D004593 ORTHO05D003703 1.2e-20 104.4 191 41.4
BcaB08g36234 Brassica carinata HOM05D004593 ORTHO05D003703 3.4e-20 102.8 200 37.5
BraA10t43765Z Brassica rapa HOM05D004593 ORTHO05D003703 7.5e-20 101.7 276 33.3
A10p16860 Brassica napus HOM05D004593 ORTHO05D003703 8.3e-19 98.2 276 33.0
Aa31LG2G18740 Aethionema arabicum HOM05D004593 ORTHO05D003703 3.2e-18 96.3 119 45.4
THA.LOC104818524 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.2e-17 94.4 174 37.4
AL8G41860 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 2.0e-17 93.6 264 30.7
Carub.0008s2528 Capsella rubella HOM05D004593 ORTHO05D003703 5.9e-17 92.0 206 32.0
A02p41070 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-15 87.0 127 41.7
A03p54980 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-15 87.0 127 41.7
THA.LOC104818528 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 2.5e-15 86.7 173 34.7
THA.LOC104818525 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 3.3e-15 86.3 173 34.7
C03p13510 Brassica napus HOM05D004593 ORTHO05D003703 5.6e-15 85.5 137 42.3
BolC3t13806H Brassica oleracea HOM05D004593 ORTHO05D003703 5.6e-15 85.5 137 42.3
THA.LOC104818529 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 7.3e-15 85.1 174 35.1
A10p16830 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-14 84.3 122 45.1
THA.LOC104818526 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.6e-14 84.0 173 34.1
THA.LOC104811270 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 2.3e-13 80.1 268 28.4
AT5G09610 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 5.8e-12 75.5 240 26.7
BcaB08g36237 Brassica carinata HOM05D004593 ORTHO05D003703 5.8e-12 75.5 200 30.5
A09p33820 Brassica napus HOM05D004593 ORTHO05D003703 1.6e-09 67.4 46 69.6
BraA10t43783Z Brassica rapa HOM05D004593 ORTHO05D043247 2.7e-09 66.6 60 60.0
Cfa000077 Carpinus fangiana HOM05D000867 ORTHO05D003703 3.5e-09 66.2 202 27.7
CARHR118680 Cardamine hirsuta HOM05D004593 ORTHO05D003703 6.0e-09 65.5 78 48.7
TWI38G2223 Tripterygium wilfordii HOM05D000867 ORTHO05D003703 2.3e-08 63.5 212 23.1
CARHR203770 Cardamine hirsuta HOM05D004593 ORTHO05D003703 3.0e-08 63.2 200 25.0
Duzib151G0751 Durio zibethinus HOM05D000867 ORTHO05D003703 5.0e-08 62.4 211 25.6
Manes.14G015800 Manihot esculenta HOM05D000867 ORTHO05D003703 8.6e-08 61.6 189 25.4
COL.COLO4_33640 Corchorus olitorius HOM05D000867 ORTHO05D003703 1.1e-07 61.2 219 24.7
Duzib268G1610 Durio zibethinus HOM05D000867 ORTHO05D003703 1.5e-07 60.8 208 25.5
AL3G40980 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.9e-07 60.5 37 75.7
AL54U10010 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.9e-07 60.5 37 75.7
Thhalv10015818m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.9e-07 60.5 221 26.2
COL.COLO4_20162 Corchorus olitorius HOM05D000867 ORTHO05D003703 2.5e-07 60.1 217 24.4
COL.COLO4_37334 Corchorus olitorius HOM05D000867 ORTHO05D003703 2.5e-07 60.1 218 24.8
BcaB07g32918 Brassica carinata HOM05D004593 ORTHO05D003703 3.3e-07 59.7 46 63.0
Thecc.04G201100 Theobroma cacao HOM05D000867 ORTHO05D003703 3.3e-07 59.7 218 23.9
Thhalv10005276m.g Eutrema salsugineum HOM05D004593 ORTHO05D017396 5.6e-07 58.9 183 29.0
DCAR_004892 Daucus carota HOM05D000867 ORTHO05D003703 9.5e-07 58.2 206 26.2
COL.COLO4_09406 Corchorus olitorius HOM05D000867 ORTHO05D003703 1.2e-06 57.8 218 24.3
Sp1g19750 Schrenkiella parvula HOM05D000867 ORTHO05D000864 1.2e-06 57.8 221 22.6
AL1G35692 Arabidopsis lyrata HOM05D000867 ORTHO05D000864 1.6e-06 57.4 219 22.4
Ciclev10023507m.g Citrus clementina HOM05D000867 ORTHO05D003703 2.1e-06 57.0 203 24.6
AT1G22240 Arabidopsis thaliana HOM05D000867 ORTHO05D000864 3.6e-06 56.2 206 22.3
Ciclev10023979m.g Citrus clementina HOM05D000867 ORTHO05D003703 3.6e-06 56.2 196 26.0
CARHR022590 Cardamine hirsuta HOM05D000867 ORTHO05D000864 6.2e-06 55.5 228 21.9
Thhalv10009853m.g Eutrema salsugineum HOM05D000867 ORTHO05D000864 6.2e-06 55.5 219 21.9


User provided reference genes

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