Gene: AT1G22240
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G22240
- Transcript Identifier AT1G22240.1
- Gene Type Coding gene
- Location Chr1 : 7853084-7854963 : positive
Gene Family Information
- ID HOM05D000867
- #Genes/#Species 692/100
- Phylogenetic origin
- ID ORTHO05D000864
- #Genes/#Species 578/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G22240.1
- symbol PUM8
- Alias APUM8,pumilio 8
- uniprot Q9LM20
Descriptions
- Description pumilio 8
- Computational description pumilio 8 (PUM8); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 7 (TAIR:AT1G78160.1); Has 2896 Blast hits to 1722 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 700; Fungi - 827; Plants - 762; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010608 | IBA | Gene Ontology | posttranscriptional regulation of gene expression | 1 |
| GO:0006417 | IEA | GOA Database | regulation of translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IBA | Gene Ontology | mRNA binding | 1 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA IBA | Gene Ontology | cytoplasm | 1 2 |
| GO:0009536 | IEA | GOA Database | plastid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |