Gene: AT1G35850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G35850
  • Transcript Identifier AT1G35850.1
  • Gene Type Coding gene
  • Location Chr1 : 13330510-13331506 : positive

Gene Family Information

  • ID HOM05D004593
  • #Genes/#Species 158/12
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G35850.1
  • symbol PUM17
  • Alias APUM17,pumilio 17
  • uniprot Q9C8B8

Descriptions

  • Description pumilio 17
  • Computational description pumilio 17 (PUM17); FUNCTIONS IN: RNA binding, binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 16 (TAIR:AT5G59280.1); Has 2291 Blast hits to 1248 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 623; Fungi - 530; Plants - 660; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0010608
IBA
GOA Databaseposttranscriptional regulation of gene expression

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001313 Pumilio RNA-binding repeat
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
Mapman id Description
35.1 not assigned.annotated