Gene: AT5G60180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G60180
  • Transcript Identifier AT5G60180.1
  • Gene Type Coding gene
  • Location Chr5 : 24233024-24234007 : negative

Gene Family Information

  • ID HOM05D004593
  • #Genes/#Species 158/12
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G60180.1
  • symbol PUM19
  • Alias APUM19,pumilio 19
  • uniprot Q9LSS8

Descriptions

  • Description pumilio 19
  • Computational description pumilio 19 (PUM19); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 18 (TAIR:AT5G60110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010608
IBA
Gene Ontologyposttranscriptional regulation of gene expression1
GO:0006417
IEA
GOA Databaseregulation of translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IBA
Gene OntologymRNA binding1
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001313 Pumilio RNA-binding repeat
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
Mapman id Description
35.1 not assigned.annotated