Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 2181.8 1085 100.0
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 2133.6 1089 98.2
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 2023.1 1086 92.8
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 2011.9 1087 92.7
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 2010.3 1116 90.9
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 2008.8 1087 92.8
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 2005.7 1087 92.5
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 1990.7 1087 91.7
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 1989.2 1087 92.1
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 1968.7 1089 90.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 1960.3 1087 90.1
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 1902.9 1049 90.9
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1881.3 1087 86.8
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1845.9 1092 84.4
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1733.8 1085 82.6
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1626.3 1098 73.9
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1579.3 1101 72.1
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1570.4 1097 71.9
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1570.4 1100 72.1
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1567.7 1111 71.3
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1563.1 1094 70.4
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1562.4 1106 71.1
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1561.2 1096 71.5
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1559.7 1098 71.9
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1558.1 1107 71.8
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1554.7 1101 71.3
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1552.7 1100 70.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1537.7 1096 71.6
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1530.8 1126 68.9
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1530.4 1121 69.1
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1523.8 1096 70.8
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1502.6 990 74.9
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1500.0 1102 69.8
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1489.2 1091 70.8
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1487.6 1091 70.5
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1479.2 1093 67.9
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1474.5 1098 68.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 1473.8 1099 67.7
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1473.0 1087 69.9
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1472.6 1095 69.3
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1472.6 1106 67.8
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1454.9 1140 65.4
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1452.2 1099 67.7
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1451.4 1144 66.4
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 1446.8 1110 67.0
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1446.0 1105 68.7
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1433.3 1126 64.3
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1433.3 1107 65.9
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1427.2 1094 67.7
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1425.2 1093 65.8
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 1423.7 1091 66.5
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1423.7 1026 68.8
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 1423.3 1097 65.6
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1422.1 1121 64.3
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1415.2 1150 63.1
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1412.5 1089 65.4
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1411.7 1092 65.8
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1410.6 1110 66.0
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1407.5 1083 66.9
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1395.6 1094 64.6
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1394.8 1099 64.4
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1393.6 1127 63.4
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1391.7 1203 62.7
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1390.2 1091 65.3
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1387.9 1092 65.2
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1386.3 1091 65.1
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1385.9 1102 63.9
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1385.5 1090 65.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1380.2 1087 66.9
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1372.5 1103 63.9
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1359.4 1091 64.6
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1349.7 1115 62.7
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1344.3 879 74.7
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1339.3 1103 63.3
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1335.9 1091 62.8
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1323.1 879 73.8
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1322.4 1216 57.5
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1314.3 1178 59.1
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1308.5 1096 60.9
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1288.9 1097 61.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1282.7 900 70.1
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1277.3 878 71.6
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1258.8 867 70.6
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1252.7 857 71.8
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1252.3 831 74.8
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1238.4 1096 59.3
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1236.1 1092 59.8
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1218.4 882 68.9
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1218.0 879 68.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1196.8 936 65.1
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1189.9 1223 55.1
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1184.9 834 68.9
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1179.1 1054 59.2
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1171.0 1066 59.9
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1164.8 1010 61.9
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1095.1 873 63.1
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 0.0e+00 1079.7 1070 53.9
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.8e-293 1011.5 709 70.8
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 1.4e-284 983.4 536 94.4
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.9e-278 963.0 909 56.1
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 3.3e-262 909.1 505 91.5
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 6.3e-261 904.8 1110 45.5
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.5e-257 893.6 1135 45.3
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.0e-250 870.9 653 66.8
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 4.4e-246 855.5 1132 43.5
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.7e-245 853.6 607 69.4
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 5.7e-230 802.0 708 58.9
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 4.7e-216 755.7 953 44.5
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 3.7e-160 570.1 481 62.4
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 8.5e-149 532.3 415 67.2
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 3.6e-147 526.9 1076 33.9
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 4.8e-144 516.5 397 68.3
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 8.5e-133 479.2 318 73.9
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.3e-112 412.1 398 55.0
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 3.4e-89 334.3 232 70.3
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 1.9e-71 275.4 290 50.0
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.8e-67 261.5 232 59.9
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 6.7e-61 240.4 177 66.7
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.6e-60 236.5 242 52.1
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 2.0e-57 228.8 213 59.6
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.2e-54 219.5 220 58.2
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 2.3e-53 215.3 209 56.9
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.4e-50 205.3 174 65.5
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 4.6e-46 191.0 144 66.0
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.7e-45 187.2 192 57.8
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 1.1e-44 186.4 212 53.3
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 7.7e-41 173.7 175 56.0
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 6.5e-40 170.6 187 54.0
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 4.2e-39 167.9 170 52.9
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 1.5e-36 159.5 163 50.9
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 3.3e-36 158.3 196 49.0
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 2.8e-35 155.2 174 51.7
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 2.2e-32 145.6 90 78.9
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 3.2e-31 141.7 175 50.9
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.2e-30 139.8 89 71.9
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.4e-29 136.3 207 45.4
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 1.5e-28 132.9 107 65.4
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 5.7e-28 131.0 212 43.4
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.7e-27 128.3 102 58.8
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 9.1e-26 123.6 156 50.0
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.6e-25 122.9 104 56.7
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 1.6e-25 122.9 90 66.7
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.3e-24 119.8 99 58.6
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 8.5e-24 117.1 168 42.3
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 9.7e-20 103.6 317 25.6
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 4.8e-19 101.3 348 27.9
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 1.1e-18 100.1 483 24.2
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 1.4e-18 99.8 55 92.7
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 2.7e-17 95.5 138 45.7
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 5.9e-17 94.4 55 89.1
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.7e-16 92.8 107 47.7
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.8e-13 82.8 75 54.7
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 4.0e-13 81.6 55 67.3
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.8e-13 80.5 104 41.3
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 8.8e-13 80.5 71 54.9
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.0e-12 79.3 54 64.8
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.3e-11 76.6 51 68.6
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 1.1e-10 73.6 70 58.6
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 4.1e-10 71.6 192 29.2
C01p30760 Brassica napus HOM05D001849 ORTHO05D042635 2.3e-08 65.9 38 86.8
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.6e-08 63.9 41 75.6
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 2.5e-07 62.4 83 48.2
CSS0017686 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.5e-07 62.4 50 62.0
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 3.6e-06 58.5 69 47.8


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