Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p26990 Brassica napus HOM05D003261 ORTHO05D004230 6.6e-87 323.9 156 100.0
BolC1t02648H Brassica oleracea HOM05D003261 ORTHO05D004230 6.6e-87 323.9 156 100.0
BcaC09g50284 Brassica carinata HOM05D003261 ORTHO05D004230 2.5e-78 295.4 144 100.0
AL3G29570 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 9.3e-49 197.2 147 70.7
CARHR091900 Cardamine hirsuta HOM05D003261 ORTHO05D004230 9.3e-49 197.2 147 70.7
AT3G16650 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 1.6e-48 196.4 152 69.1
CSS0013014 Camellia sinensis var. sinensis HOM05D003261 ORTHO05D004230 2.1e-48 196.1 158 67.7
Ca_01925_v3 Cicer arietinum L. HOM05D003261 ORTHO05D004230 1.9e-46 189.5 147 69.4
AUR62034658 Chenopodium quinoa HOM05D003261 ORTHO05D004230 2.5e-46 189.1 152 69.1
AUR62008590 Chenopodium quinoa HOM05D003261 ORTHO05D004230 4.3e-46 188.3 152 68.4
Ah.08g212490 Amaranthus hybridus HOM05D003261 ORTHO05D004230 2.8e-45 185.7 147 69.4
Hund20540 Selenicereus undatus HOM05D003261 ORTHO05D004230 6.2e-45 184.5 147 69.4
CDE09G0842 Ceratophyllum demersum HOM05D003261 ORTHO05D004230 2.4e-44 182.6 147 67.3
ECA234G0824 Erigeron canadensis HOM05D003261 ORTHO05D004230 3.1e-44 182.2 150 66.0
Rhsim12G0061000 Rhododendron simsii HOM05D003261 ORTHO05D004230 2.2e-42 176.0 147 64.6
A09p49870 Brassica napus HOM05D003261 ORTHO05D004230 2.9e-42 175.6 144 69.4
BraA09t40438Z Brassica rapa HOM05D003261 ORTHO05D004230 2.9e-42 175.6 144 69.4
arahy.Tifrunner.gnm1.ann1.9TJ054 Arachis hypogaea HOM05D003261 ORTHO05D004230 3.8e-42 175.3 140 68.6
arahy.Tifrunner.gnm1.ann1.JJQ0MC Arachis hypogaea HOM05D003261 ORTHO05D004230 3.8e-42 175.3 140 68.6
BcaC09g48619 Brassica carinata HOM05D003261 ORTHO05D004230 1.9e-41 172.9 150 67.3
BolC1t04740H Brassica oleracea HOM05D003261 ORTHO05D004230 2.5e-41 172.6 132 72.0
ECA234G3111 Erigeron canadensis HOM05D001191 ORTHO05D000979 2.1e-40 169.5 149 63.1
MD16G1081900 Malus domestica HOM05D003261 ORTHO05D004230 3.0e-39 165.6 157 59.9
ATR0796G128 Amborella trichopoda HOM05D003261 ORTHO05D004230 1.1e-38 163.7 139 63.3
AagrBONN_evm.TU.Sc2ySwM_228.4942 Anthoceros agrestis HOM05D003261 ORTHO05D004230 2.5e-38 162.5 139 63.3
Carub.0007s2576 Capsella rubella HOM05D003261 ORTHO05D004230 2.5e-38 162.5 121 71.1
CiPaw.01G147300 Carya illinoinensis HOM05D003261 ORTHO05D004230 2.5e-38 162.5 127 70.1
AL7G39370 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 3.3e-38 162.2 118 73.7
TWI09G1311 Tripterygium wilfordii HOM05D003261 ORTHO05D004230 3.3e-38 162.2 133 66.2
Nitab4.5_0014715g0010 Nicotiana tabacum HOM05D003261 ORTHO05D004230 4.3e-38 161.8 146 61.6
TAR365G1013 Trochodendron aralioides HOM05D003261 ORTHO05D004230 5.7e-38 161.4 133 66.9
HanXRQChr15g0490951 Helianthus annuus HOM05D003261 ORTHO05D004230 9.7e-38 160.6 147 61.2
Pp3c16_8560 Physcomitrium patens HOM05D003261 ORTHO05D004230 9.7e-38 160.6 141 61.0
Pp3c5_15520 Physcomitrium patens HOM05D003261 ORTHO05D004230 1.3e-37 160.2 141 60.3
BcaC06g32973 Brassica carinata HOM05D003261 ORTHO05D004230 1.6e-37 159.8 115 75.7
BcaNung00239 Brassica carinata HOM05D003261 ORTHO05D004230 1.6e-37 159.8 115 75.7
Glyma.15G149300 Glycine max HOM05D003261 ORTHO05D004230 2.2e-37 159.5 128 68.0
Phvul.009G249100 Phaseolus vulgaris HOM05D003261 ORTHO05D004230 2.2e-37 159.5 128 68.0
Sp7g14350 Schrenkiella parvula HOM05D003261 ORTHO05D004230 2.2e-37 159.5 115 74.8
Nn3g21489 Nelumbo nucifera HOM05D003261 ORTHO05D004230 2.8e-37 159.1 130 68.5
BcaC06g33437 Brassica carinata HOM05D003261 ORTHO05D004230 4.8e-37 158.3 115 74.8
A03p49450 Brassica napus HOM05D003261 ORTHO05D004230 4.8e-37 158.3 115 74.8
C07p47500 Brassica napus HOM05D003261 ORTHO05D004230 4.8e-37 158.3 115 74.8
BolC7t45277H Brassica oleracea HOM05D003261 ORTHO05D004230 4.8e-37 158.3 115 74.8
BraA03t14046Z Brassica rapa HOM05D003261 ORTHO05D004230 4.8e-37 158.3 115 74.8
Lalb_Chr18g0051601 Lupinus albus HOM05D003261 ORTHO05D004230 4.8e-37 158.3 129 66.7
VMungo1309G2776 Vigna mungo HOM05D003261 ORTHO05D004230 4.8e-37 158.3 128 68.0
Sp3g14940 Schrenkiella parvula HOM05D003261 ORTHO05D004230 8.2e-37 157.5 118 72.0
Lalb_Chr15g0083461 Lupinus albus HOM05D003261 ORTHO05D004230 1.1e-36 157.1 129 65.9
Carub.0003s1638 Capsella rubella HOM05D003261 ORTHO05D004230 1.8e-36 156.4 118 71.2
Thhalv10025068m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 1.8e-36 156.4 115 73.9
Psat1g155040 Pisum sativum HOM05D003261 ORTHO05D004230 1.8e-36 156.4 126 66.7
AT4G15900 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 2.4e-36 156.0 115 73.0
CARHR290440 Cardamine hirsuta HOM05D003261 ORTHO05D004230 2.4e-36 156.0 115 73.0
Atru.chr4.2874 Acer truncatum HOM05D003261 ORTHO05D004230 3.1e-36 155.6 124 67.7
Aa31LG10G6240 Aethionema arabicum HOM05D003261 ORTHO05D004230 4.1e-36 155.2 115 72.2
Glyma.09G043800 Glycine max HOM05D003261 ORTHO05D004230 9.0e-36 154.1 123 67.5
Mapoly0016s0006 Marchantia polymorpha HOM05D003261 ORTHO05D004230 9.0e-36 154.1 140 59.3
SEGI_14553 Sequoiadendron giganteum HOM05D003261 ORTHO05D004230 9.0e-36 154.1 140 62.1
Ciclev10004853m.g Citrus clementina HOM05D003261 ORTHO05D004230 1.2e-35 153.7 128 66.4
SMO240G0024 Selaginella moellendorffii HOM05D003261 ORTHO05D004230 1.2e-35 153.7 135 60.7
A01p37650 Brassica napus HOM05D003261 ORTHO05D004230 2.0e-35 152.9 118 71.2
BraA01t03826Z Brassica rapa HOM05D003261 ORTHO05D004230 2.0e-35 152.9 118 71.2
CiPaw.02G081900 Carya illinoinensis HOM05D003261 ORTHO05D004230 2.6e-35 152.5 123 66.7
Gohir.D09G239000 Gossypium hirsutum HOM05D003261 ORTHO05D004230 2.6e-35 152.5 152 59.2
Sc19g0005390 Simmondsia chinensis HOM05D003261 ORTHO05D004230 2.6e-35 152.5 131 66.4
Nn4g25790 Nelumbo nucifera HOM05D003261 ORTHO05D004230 3.4e-35 152.1 124 66.9
Gohir.A09G238100 Gossypium hirsutum HOM05D003261 ORTHO05D004230 4.5e-35 151.8 131 64.1
C01p47680 Brassica napus HOM05D003261 ORTHO05D004230 7.7e-35 151.0 118 70.3
Prupe.6G318200 Prunus persica HOM05D003261 ORTHO05D004230 1.7e-34 149.8 130 60.8
Aqoxy5G00755 Aquilegia oxysepala HOM05D003261 ORTHO05D004230 2.2e-34 149.4 123 66.7
Lj6g0023887 Lotus japonicus HOM05D003261 ORTHO05D004230 2.2e-34 149.4 123 65.9
Sabra10G0008000 Salix brachista HOM05D003261 ORTHO05D004230 2.9e-34 149.1 118 68.6
PRCOL_00003913 Prasinoderma coloniale HOM05D003261 ORTHO05D004230 3.8e-34 148.7 149 57.7
Sed0025564 Sechium edule HOM05D003261 ORTHO05D004230 3.8e-34 148.7 118 67.8
MSTRG.20825 Avicennia marina HOM05D003261 ORTHO05D004230 5.0e-34 148.3 128 64.8
TPR.G22357 Trifolium pratense HOM05D003261 ORTHO05D004230 5.0e-34 148.3 123 65.0
CDE08G1027 Ceratophyllum demersum HOM05D003261 ORTHO05D004230 6.5e-34 147.9 126 65.1
Medtr2g436510 Medicago truncatula HOM05D003261 ORTHO05D004230 6.5e-34 147.9 121 65.3
THA.LOC104820293 Tarenaya hassleriana HOM05D003261 ORTHO05D004230 6.5e-34 147.9 118 67.8
Thhalv10022263m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 1.4e-33 146.7 115 67.8
Rhsim04G0224200 Rhododendron simsii HOM05D003261 ORTHO05D004230 1.4e-33 146.7 121 66.1
vmacro08167 Vaccinium macrocarpon HOM05D003261 ORTHO05D004230 1.4e-33 146.7 121 66.1
Cfa002537 Carpinus fangiana HOM05D003261 ORTHO05D004230 1.9e-33 146.4 127 62.2
Potri.010G012800 Populus trichocarpa HOM05D003261 ORTHO05D004230 1.9e-33 146.4 118 66.9
CBR_g46442 Chara braunii HOM05D003261 ORTHO05D004230 2.5e-33 146.0 143 56.6
DCAR_008606 Daucus carota HOM05D003261 ORTHO05D004230 2.5e-33 146.0 118 67.8
Manes.03G196900 Manihot esculenta HOM05D003261 ORTHO05D004230 2.5e-33 146.0 121 66.9
Actinidia19581 Actinidia chinensis HOM05D003261 ORTHO05D004230 3.2e-33 145.6 121 67.8
Actinidia40288 Actinidia chinensis HOM05D003261 ORTHO05D004230 3.2e-33 145.6 121 66.9
CSS0009030 Camellia sinensis var. sinensis HOM05D003261 ORTHO05D004230 4.2e-33 145.2 118 67.8
GSVIVG01035143001 Vitis vinifera HOM05D003261 ORTHO05D004230 4.2e-33 145.2 118 68.6
Haze_01185 Corylus avellana HOM05D003261 ORTHO05D004230 5.5e-33 144.8 117 65.8
Dinv29761 Davidia involucrata HOM05D003261 ORTHO05D004230 5.5e-33 144.8 123 64.2
TAR623G1368 Trochodendron aralioides HOM05D003261 ORTHO05D004230 5.5e-33 144.8 121 66.1
PSO170G4560 Papaver somniferum HOM05D003261 ORTHO05D004230 9.4e-33 144.1 118 66.1
PSO407G0331 Papaver somniferum HOM05D003261 ORTHO05D004230 9.4e-33 144.1 118 66.1
HanXRQChr17g0561551 Helianthus annuus HOM05D003261 ORTHO05D004230 1.2e-32 143.7 118 66.1
Solyc01g094480.4 Solanum lycopersicum HOM05D003261 ORTHO05D004230 1.2e-32 143.7 121 64.5
Sopen01g038290 Solanum pennellii HOM05D003261 ORTHO05D004230 1.2e-32 143.7 121 64.5
Lj7A515T86 Lonicera japonica HOM05D003261 ORTHO05D004230 1.6e-32 143.3 118 66.1
Nitab4.5_0003111g0030 Nicotiana tabacum HOM05D003261 ORTHO05D004230 2.1e-32 142.9 121 63.6
Peaxi162Scf00056g00015 Petunia axillaris HOM05D003261 ORTHO05D004230 2.1e-32 142.9 118 65.3
RcHm_v2.0_Chr4g0422851 Rosa chinensis HOM05D003261 ORTHO05D004230 2.1e-32 142.9 118 65.3
THA.LOC104821781 Tarenaya hassleriana HOM05D003261 ORTHO05D004230 2.1e-32 142.9 117 67.5
ClCG06G005050 Citrullus lanatus HOM05D003261 ORTHO05D004230 2.7e-32 142.5 115 68.7
MELO3C021320.2 Cucumis melo HOM05D003261 ORTHO05D004230 2.7e-32 142.5 115 68.7
Hma1.2p1_1185F.1_g264960 Hydrangea macrophylla HOM05D003261 ORTHO05D004230 2.7e-32 142.5 118 66.1
Hma1.2p1_1807F.1_g303320 Hydrangea macrophylla HOM05D003261 ORTHO05D004230 2.7e-32 142.5 118 66.1
Lsat_1_v5_gn_4_36321 Lactuca sativa HOM05D003261 ORTHO05D004230 2.7e-32 142.5 117 66.7
Cpa.g.sc16.189 Carica papaya HOM05D003261 ORTHO05D004230 3.6e-32 142.1 121 64.5
FvH4_4g18400 Fragaria vesca HOM05D003261 ORTHO05D004230 3.6e-32 142.1 118 65.3
FAN07G1152 Fragaria x ananassa HOM05D003261 ORTHO05D004230 3.6e-32 142.1 118 65.3
FAN12G0468 Fragaria x ananassa HOM05D003261 ORTHO05D004230 3.6e-32 142.1 118 65.3
FAN12G4234 Fragaria x ananassa HOM05D003261 ORTHO05D004230 3.6e-32 142.1 118 65.3
FAN17G0608 Fragaria x ananassa HOM05D003261 ORTHO05D004230 3.6e-32 142.1 118 65.3
Duzib052G0276 Durio zibethinus HOM05D003261 ORTHO05D004230 7.9e-32 141.0 121 64.5
CsaV3_6G023930 Cucumis sativus L. HOM05D003261 ORTHO05D004230 1.0e-31 140.6 115 67.0
Migut.B01741 Erythranthe guttata HOM05D003261 ORTHO05D004230 1.0e-31 140.6 122 63.9
Duzib151G0067 Durio zibethinus HOM05D003261 ORTHO05D004230 1.8e-31 139.8 121 63.6
MD00G1128100 Malus domestica HOM05D003261 ORTHO05D004230 1.8e-31 139.8 121 62.8
PSO478G1326 Papaver somniferum HOM05D003261 ORTHO05D004230 1.8e-31 139.8 143 60.1
Prupe.1G134100 Prunus persica HOM05D003261 ORTHO05D004230 1.8e-31 139.8 118 64.4
Peaxi162Scf00089g00028 Petunia axillaris HOM05D003261 ORTHO05D004230 2.3e-31 139.4 123 61.0
SalBow3G0655 Salvia bowleyana HOM05D003261 ORTHO05D004230 3.0e-31 139.0 124 61.3
COL.COLO4_13845 Corchorus olitorius HOM05D003261 ORTHO05D004230 3.9e-31 138.7 118 64.4
Eucgr.H03935 Eucalyptus grandis HOM05D003261 ORTHO05D004230 5.1e-31 138.3 117 66.7
Gorai.006G261700 Gossypium raimondii HOM05D003261 ORTHO05D004230 5.1e-31 138.3 121 63.6
Thecc.04G286600 Theobroma cacao HOM05D003261 ORTHO05D004230 5.1e-31 138.3 117 64.1
QL06p009632 Quercus lobata HOM05D003261 ORTHO05D004230 6.7e-31 137.9 115 66.1
Gohir.D02G055000 Gossypium hirsutum HOM05D003261 ORTHO05D004230 8.8e-31 137.5 118 63.6
Gorai.005G060900 Gossypium raimondii HOM05D003261 ORTHO05D004230 8.8e-31 137.5 118 63.6
Cre10.g446900 Chlamydomonas reinhardtii HOM05D003261 ORTHO05D004230 1.1e-30 137.1 142 54.9
Gohir.A02G049900 Gossypium hirsutum HOM05D003261 ORTHO05D004230 1.1e-30 137.1 118 63.6
PGR004G2696 Punica granatum HOM05D003261 ORTHO05D004230 1.5e-30 136.7 115 65.2
unitig_8.g3803 Utricularia gibba HOM05D003261 ORTHO05D004230 2.5e-30 136.0 158 50.6
MBI16_g12924_MAGBIO Magnolia biondii HOM05D003261 ORTHO05D004230 3.3e-30 135.6 115 65.2
Os03g0339100 Oryza sativa ssp. japonica HOM05D003261 ORTHO05D004230 4.3e-30 135.2 118 64.4
Zm00001eb051300 Zea mays HOM05D003261 ORTHO05D004230 4.3e-30 135.2 121 62.8
FAN07G0399 Fragaria x ananassa HOM05D003261 ORTHO05D004230 9.7e-30 134.0 132 58.3
MCO14G267 Micromonas commoda HOM05D003261 ORTHO05D004230 1.3e-29 133.7 138 54.3
Aa31LG8G3770 Aethionema arabicum HOM05D003261 ORTHO05D004230 2.2e-29 132.9 115 65.2
CANSAT78G0131 Cannabis sativa HOM05D003261 ORTHO05D004230 2.2e-29 132.9 111 66.7
SGA_v2.0_scaffold95G28842 Striga asiatica HOM05D003261 ORTHO05D004230 2.2e-29 132.9 114 61.4
unitig_22.g5357 Utricularia gibba HOM05D003261 ORTHO05D004230 4.8e-29 131.7 118 61.9
MD16G1167100 Malus domestica HOM05D003261 ORTHO05D004230 8.2e-29 131.0 115 61.7
Nitab4.5_0001251g0010 Nicotiana tabacum HOM05D003261 ORTHO05D004230 6.9e-28 127.9 149 51.7
HPP92_023226 Vanilla planifolia HOM05D003261 ORTHO05D004230 3.4e-27 125.6 118 58.5
BraA01t02073Z Brassica rapa HOM05D003261 ORTHO05D004230 4.2e-25 118.6 74 85.1
COL.COLO4_06938 Corchorus olitorius HOM05D003261 ORTHO05D004230 4.2e-25 118.6 148 50.7
CiPaw.14G132800 Carya illinoinensis HOM05D003261 ORTHO05D004230 1.6e-24 116.7 63 85.7
EL10Ac7g17420 Beta vulgaris HOM05D003261 ORTHO05D004230 2.7e-24 115.9 104 64.4
CiPaw.06G074500 Carya illinoinensis HOM05D003261 ORTHO05D004230 6.1e-24 114.8 63 85.7
Aqoxy3G03984 Aquilegia oxysepala HOM05D003261 ORTHO05D004230 8.8e-23 110.9 127 55.9
Rhsim06G0116500 Rhododendron simsii HOM05D003261 ORTHO05D004230 2.0e-22 109.8 123 52.8
Cc02_g37840 Coffea canephora HOM05D003261 ORTHO05D004230 4.4e-22 108.6 63 81.0
DCAR_030163 Daucus carota HOM05D003261 ORTHO05D004230 2.2e-18 96.3 112 51.8
Medtr2g019400 Medicago truncatula HOM05D003261 ORTHO05D004230 3.8e-18 95.5 102 52.9
Peaxi162Scf00409g00039 Petunia axillaris HOM05D003261 ORTHO05D004230 5.0e-18 95.1 115 49.6
Nitab4.5_0003111g0080 Nicotiana tabacum HOM05D003261 ORTHO05D004230 8.5e-18 94.4 52 82.7
Peaxi162Scf00858g00015 Petunia axillaris HOM05D003261 ORTHO05D004230 1.1e-17 94.0 63 68.3
SHI00253 Sapria himalayana HOM05D003261 ORTHO05D004230 1.1e-17 94.0 52 80.8
PGSC0003DMG400008918 Solanum tuberosum HOM05D003261 ORTHO05D004230 2.5e-17 92.8 121 52.1
DCAR_003343 Daucus carota HOM05D003261 ORTHO05D004230 5.5e-17 91.7 104 53.8
RcHm_v2.0_Chr4g0429821 Rosa chinensis HOM05D003261 ORTHO05D004230 9.4e-17 90.9 62 71.0
BcaC07g40009 Brassica carinata HOM05D000211 ORTHO05D004230 1.2e-16 90.5 105 55.2
DCAR_030161 Daucus carota HOM05D003261 ORTHO05D004230 4.7e-16 88.6 105 52.4
TPR.G7328 Trifolium pratense HOM05D003261 ORTHO05D004230 6.1e-16 88.2 52 75.0
AL6G53110 Arabidopsis lyrata HOM05D000915 ORTHO05D001662 3.0e-15 85.9 106 53.8
MD05G1262800 Malus domestica HOM05D003261 ORTHO05D004230 3.0e-15 85.9 220 33.6
C08p32230 Brassica napus HOM05D000211 ORTHO05D041739 3.9e-15 85.5 83 63.9
DCAR_030165 Daucus carota HOM05D003261 ORTHO05D004230 1.1e-14 84.0 101 50.5
Nitab4.5_0000244g0390 Nicotiana tabacum HOM05D003261 ORTHO05D004230 5.7e-14 81.6 65 66.2
FvH4_4g23450 Fragaria vesca HOM05D003261 ORTHO05D004230 9.7e-14 80.9 94 51.1
FAN12G3743 Fragaria x ananassa HOM05D003261 ORTHO05D004230 9.7e-14 80.9 94 51.1
TPR.G39909 Trifolium pratense HOM05D003261 ORTHO05D004230 2.2e-13 79.7 86 57.0
Aqoxy5G03295 Aquilegia oxysepala HOM05D003261 ORTHO05D004230 2.8e-13 79.3 126 42.1
Haze_27215 Corylus avellana HOM05D003261 ORTHO05D004230 8.2e-13 77.8 123 39.8
COL.COLO4_10588 Corchorus olitorius HOM05D004885 ORTHO05D006124 2.0e-11 73.2 117 44.4
Nitab4.5_0002089g0060 Nicotiana tabacum HOM05D003261 ORTHO05D014021 4.5e-11 72.0 85 54.1
Aqoxy7G03551 Aquilegia oxysepala HOM05D003261 ORTHO05D014021 1.2e-06 57.4 73 54.8
CsaV3_6G046580 Cucumis sativus L. HOM05D003261 ORTHO05D004230 1.2e-06 57.4 42 61.9
MELO3C007855.2 Cucumis melo HOM05D003261 ORTHO05D004230 2.6e-06 56.2 36 72.2
SMO340G0096 Selaginella moellendorffii HOM05D003261 ORTHO05D010935 2.6e-06 56.2 36 72.2


User provided reference genes

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