Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 2.8e-88 328.6 163 100.0
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 6.4e-85 317.4 160 97.5
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 6.4e-85 317.4 160 97.5
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 5.5e-84 314.3 160 96.2
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 5.5e-84 314.3 160 96.2
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 5.5e-84 314.3 160 96.2
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 5.5e-84 314.3 160 96.2
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 5.5e-84 314.3 160 96.2
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 8.7e-82 307.0 160 93.1
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.5e-81 306.2 157 95.5
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 4.3e-81 304.7 160 94.4
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 2.8e-80 302.0 160 91.9
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 3.5e-75 285.0 160 86.9
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 6.1e-75 284.3 160 86.9
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 1.0e-74 283.5 160 86.9
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 3.9e-74 281.6 160 86.2
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 5.1e-74 281.2 160 86.2
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 5.1e-74 281.2 160 86.2
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 2.5e-73 278.9 160 85.0
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 2.5e-73 278.9 160 85.0
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 3.3e-73 278.5 160 85.0
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 3.3e-73 278.5 160 84.4
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 9.7e-73 276.9 160 84.4
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 9.7e-73 276.9 160 84.4
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 9.7e-73 276.9 160 85.0
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 2.8e-72 275.4 160 84.4
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 4.8e-72 274.6 160 84.4
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 8.2e-72 273.9 160 83.8
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.4e-71 273.1 160 83.8
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.4e-71 273.1 160 83.8
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.4e-71 273.1 160 83.8
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 1.4e-71 273.1 160 83.1
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 6.9e-71 270.8 160 84.4
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 6.9e-71 270.8 160 84.4
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.5e-70 269.6 160 81.9
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 3.4e-70 268.5 160 80.6
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 2.2e-69 265.8 160 80.6
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 2.2e-69 265.8 160 80.6
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-69 265.4 160 80.6
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 5.0e-69 264.6 160 81.2
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.5e-69 264.2 160 80.0
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-68 263.5 160 80.6
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 1.9e-68 262.7 160 78.8
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-68 262.7 160 80.0
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 4.2e-68 261.5 151 82.8
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 2.3e-66 255.8 157 79.6
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 2.2e-61 239.2 153 77.8
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.2e-61 239.2 153 77.8
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 2.2e-61 239.2 153 78.4
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 2.2e-61 239.2 153 78.4
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 2.5e-60 235.7 148 79.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.1e-59 232.6 160 71.9
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 2.1e-59 232.6 220 57.3
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 2.3e-58 229.2 151 76.2
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 5.9e-54 214.5 160 69.4
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 5.9e-54 214.5 160 67.5
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 6.7e-50 201.1 160 67.5
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 4.4e-49 198.4 151 67.5
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.9e-45 185.7 109 81.7
BraSC58t46409Z Brassica rapa HOM05D000216 ORTHO05D001131 9.4e-44 180.6 100 90.0
Gorai.002G188200 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.5e-30 135.6 97 71.1
Gohir.A01G160850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.3e-29 132.9 92 71.7
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 2.9e-29 132.5 67 94.0
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 4.2e-28 128.6 67 89.6
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 4.2e-28 128.6 67 88.1
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 4.2e-28 128.6 67 88.1
Gohir.A04G053721 Gossypium hirsutum HOM05D000216 ORTHO05D001131 4.2e-28 128.6 87 75.9
Gohir.D01G151850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.4e-26 123.6 85 75.3
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.8e-26 123.2 67 83.6
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 4.0e-26 122.1 65 86.2
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 4.0e-26 122.1 67 85.1
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 6.8e-26 121.3 60 98.3
Gorai.005G236000 Gossypium raimondii HOM05D000216 ORTHO05D001131 8.9e-26 120.9 87 73.6
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.2e-25 120.6 70 84.3
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 4.9e-24 115.2 150 43.3
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 6.3e-24 114.8 65 78.5
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 8.3e-24 114.4 149 42.3
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 8.3e-24 114.4 149 42.3
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 8.3e-24 114.4 149 42.3
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 8.3e-24 114.4 149 42.3
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 8.3e-24 114.4 149 42.3
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 4.3e-20 102.1 53 84.9
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 7.3e-20 101.3 54 85.2
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 7.3e-20 101.3 54 87.0
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 7.3e-20 101.3 54 87.0
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.2e-19 100.5 54 85.2
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 2.8e-19 99.4 54 85.2
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 8.0e-19 97.8 53 88.7
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.3e-18 96.3 55 80.0
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 2.3e-18 96.3 54 81.5
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 3.1e-18 95.9 54 83.3
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 5.2e-18 95.1 54 83.3
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.5e-17 93.6 54 79.6
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.6e-17 92.8 55 78.2
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 5.8e-17 91.7 100 55.0
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 9.8e-17 90.9 160 38.8
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 4.9e-16 88.6 104 44.2
BolSC44t60850H Brassica oleracea HOM05D000216 ORTHO05D001131 1.4e-15 87.0 42 95.2
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.4e-15 87.0 54 75.9
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.1e-12 77.4 67 61.2
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.9e-12 76.6 51 72.5
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.8e-11 72.8 33 97.0
CAN.G1243.1 Capsicum annuum HOM05D000216 ORTHO05D001131 4.7e-11 72.0 37 91.9
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.3e-10 69.7 41 82.9
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.5e-09 67.0 35 82.9
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.6e-09 66.2 31 93.5
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.2e-06 57.4 54 57.4


User provided reference genes

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