Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 2.6e-220 768.5 397 100.0
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 4.9e-219 764.2 397 99.5
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 4.9e-219 764.2 397 99.5
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 3.0e-208 728.4 397 96.0
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 2.6e-204 715.3 402 94.0
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 2.6e-204 715.3 402 94.0
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 1.1e-191 673.3 410 88.8
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 9.5e-191 670.2 405 88.9
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 4.0e-189 664.8 414 87.0
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 3.2e-178 628.6 408 82.4
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 2.7e-169 599.0 408 78.2
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.1e-153 546.2 424 72.2
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 8.8e-144 514.2 418 69.9
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 3.7e-134 482.3 385 67.3
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.6e-132 476.1 377 67.6
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.6e-132 476.1 377 67.6
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 7.7e-132 474.6 375 68.5
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.0e-131 474.2 392 65.6
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.9e-131 472.6 378 67.7
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 2.9e-131 472.6 389 65.6
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 8.5e-131 471.1 381 66.1
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 1.4e-130 470.3 377 67.1
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 1.2e-129 467.2 380 66.3
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.8e-128 463.4 378 67.7
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.3e-128 463.0 382 66.0
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 3.0e-128 462.6 365 68.5
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 8.8e-128 461.1 389 65.6
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 2.6e-127 459.5 398 63.3
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 2.6e-127 459.5 382 65.7
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 4.4e-127 458.8 371 66.6
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 5.7e-127 458.4 364 68.7
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 7.4e-127 458.0 367 65.9
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 7.4e-127 458.0 404 61.9
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 9.7e-127 457.6 383 62.9
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.7e-126 456.8 371 64.7
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 3.7e-126 455.7 392 64.8
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 2.4e-125 453.0 373 66.8
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 4.1e-125 452.2 375 64.0
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 7.0e-125 451.4 283 85.5
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 7.0e-125 451.4 365 64.9
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.0e-123 447.6 369 65.6
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.0e-123 447.6 400 61.5
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.3e-123 447.2 409 62.8
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.1e-122 444.1 379 65.4
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.5e-122 443.7 408 62.3
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.9e-122 443.4 379 61.2
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.2e-122 442.6 393 62.1
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 4.2e-122 442.2 392 60.5
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 6.1e-121 438.3 408 62.0
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 1.0e-120 437.6 372 64.0
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.4e-120 437.2 375 62.9
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.4e-120 437.2 411 60.8
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 2.3e-120 436.4 367 63.8
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 6.8e-120 434.9 389 62.5
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.5e-119 433.7 383 61.4
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 1.5e-119 433.7 410 58.5
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 4.4e-119 432.2 377 61.5
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 5.7e-119 431.8 386 61.7
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 9.7e-119 431.0 392 61.5
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 1.3e-118 430.6 397 59.9
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 1.7e-118 430.3 372 62.1
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 3.7e-118 429.1 404 59.7
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 6.3e-118 428.3 374 61.8
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 1.4e-117 427.2 375 61.9
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.4e-117 426.4 392 59.4
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 1.2e-116 424.1 375 61.6
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 1.6e-116 423.7 386 61.9
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.0e-115 421.0 383 62.4
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.0e-115 421.0 377 62.1
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.8e-115 419.1 389 60.2
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 8.5e-115 417.9 307 69.4
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 1.5e-114 417.2 424 56.1
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.6e-113 413.7 394 58.1
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.7e-113 412.9 383 58.5
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 6.1e-113 411.8 297 71.0
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 4.0e-112 409.1 439 54.7
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 5.2e-112 408.7 355 63.4
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 2.0e-111 406.8 378 57.7
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 3.4e-111 406.0 369 59.6
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.1e-109 401.0 303 69.3
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.8e-109 400.2 298 69.1
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.8e-109 400.2 293 72.7
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.7e-107 393.7 275 72.0
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.7e-107 393.7 380 57.4
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 3.8e-107 392.5 296 70.6
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.6e-107 391.7 292 70.9
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 7.2e-106 388.3 300 68.3
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 1.8e-104 383.6 256 76.6
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.1e-101 374.4 390 53.1
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.7e-99 367.1 286 64.7
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 6.6e-99 365.2 408 52.0
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 1.9e-98 363.6 281 66.9
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 9.5e-98 361.3 274 65.7
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 1.8e-96 357.1 386 53.9
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 7.5e-95 351.7 373 55.8
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 4.1e-93 345.9 420 48.6
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.3e-91 340.9 216 76.9
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.2e-89 334.3 383 53.5
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 4.7e-89 332.4 264 62.1
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.7e-86 323.9 257 66.1
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 4.1e-85 319.3 358 49.2
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 8.6e-83 311.6 244 67.2
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 4.7e-81 305.8 385 50.6
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 6.8e-80 302.0 280 60.4
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 4.4e-79 299.3 172 88.4
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.6e-76 290.8 382 47.6
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.6e-76 289.3 328 53.0
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.5e-74 283.5 201 72.6
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 5.1e-67 259.2 140 87.9
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 2.2e-62 243.8 240 53.3
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.9e-61 240.7 197 59.4
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 7.9e-52 208.8 304 47.4
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-51 208.0 261 49.4
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 5.1e-43 179.5 187 46.0
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.8e-41 173.7 290 36.6
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 2.2e-33 147.5 197 39.1
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 6.3e-33 146.0 149 54.4
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.0e-27 128.6 151 49.0
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 8.8e-19 99.0 69 69.6
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.6e-12 78.2 170 32.9
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.8e-11 74.7 92 48.9
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 7.7e-07 59.3 134 36.6
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.2e-06 57.8 131 32.1


User provided reference genes

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