Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 0.0e+00 1714.1 1008 100.0
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 0.0e+00 1544.6 1061 89.1
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 0.0e+00 1489.9 1062 80.9
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 0.0e+00 1329.3 906 83.2
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 0.0e+00 1285.4 1053 73.2
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 0.0e+00 1258.4 1058 66.4
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 0.0e+00 1207.6 1043 64.7
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 0.0e+00 1150.6 1044 60.9
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 0.0e+00 1149.8 1071 60.4
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 0.0e+00 1147.5 1044 61.1
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 0.0e+00 1144.4 1056 60.2
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 0.0e+00 1143.6 1044 60.5
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 0.0e+00 1143.6 1044 60.5
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 0.0e+00 1141.3 1044 60.7
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 0.0e+00 1139.0 1044 60.2
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 0.0e+00 1130.2 1044 60.6
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 0.0e+00 1129.4 1005 61.6
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 0.0e+00 1124.4 1005 61.3
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 0.0e+00 1124.0 1044 59.7
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 0.0e+00 1100.1 963 62.0
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 2.8e-287 992.3 1044 53.5
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 1.1e-286 990.3 1043 56.7
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 6.9e-286 987.6 1044 54.1
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 6.4e-284 981.1 1044 53.4
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 5.4e-283 978.0 1044 53.1
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 1.2e-282 976.9 1045 52.8
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 1.4e-278 963.4 1044 52.5
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 4.0e-278 961.8 1046 52.6
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 1.1e-275 953.7 1093 51.1
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 5.4e-275 951.4 1045 52.1
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 1.1e-272 943.7 1052 51.9
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 1.9e-272 943.0 1047 51.6
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 2.1e-271 939.5 1007 53.2
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 6.9e-270 934.5 1045 55.5
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 1.2e-269 933.7 1058 51.3
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 2.0e-269 932.9 1008 52.1
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 1.0e-268 930.6 1045 52.4
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 9.3e-267 924.1 1045 50.9
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 2.1e-266 922.9 1008 51.3
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 7.9e-266 921.0 1050 50.6
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 7.4e-264 914.4 1027 50.9
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 5.3e-262 908.3 1044 53.2
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 2.0e-261 906.4 1044 53.2
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 1.0e-260 904.0 1044 54.4
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 4.9e-260 901.7 1053 49.5
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 8.4e-260 901.0 1041 49.8
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 1.1e-259 900.6 1002 51.9
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 5.5e-259 898.3 1056 52.7
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 2.7e-258 896.0 1045 49.6
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 7.9e-258 894.4 1044 51.6
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 7.9e-258 894.4 1047 50.6
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 1.9e-256 889.8 1059 52.4
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 1.4e-254 883.6 1042 50.3
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 1.9e-251 873.2 1045 49.6
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 1.9e-251 873.2 1045 49.4
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 4.2e-251 872.1 1052 52.3
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 5.5e-251 871.7 1045 48.9
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 2.1e-250 869.8 1050 53.0
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 4.6e-250 868.6 1041 48.7
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 3.9e-249 865.5 1054 52.1
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 2.0e-248 863.2 1043 49.0
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 2.0e-248 863.2 1045 49.0
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 2.2e-247 859.8 1054 48.5
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 3.4e-245 852.4 1121 48.0
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 3.8e-244 849.0 1061 47.0
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 8.5e-244 847.8 1133 45.7
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 1.1e-243 847.4 1043 49.9
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 3.6e-242 842.4 1137 45.9
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 5.1e-241 838.6 1044 48.8
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 3.3e-240 835.9 1007 51.3
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 7.4e-240 834.7 1029 51.6
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 1.7e-239 833.6 1048 49.5
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 3.7e-239 832.4 1058 49.9
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 3.7e-239 832.4 1041 47.7
AL6G18000 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.8e-238 830.1 766 62.1
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 2.4e-238 829.7 1045 48.4
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 2.0e-237 826.6 1059 47.6
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 4.5e-237 825.5 1130 48.8
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 8.0e-234 814.7 1040 46.8
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 5.7e-232 808.5 1047 48.8
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 1.7e-231 807.0 1041 48.5
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 3.7e-231 805.8 1011 47.9
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 3.7e-231 805.8 965 51.7
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 1.1e-230 804.3 1049 46.1
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 9.1e-230 801.2 1025 49.1
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 2.3e-225 786.6 1041 46.2
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 1.4e-222 777.3 1067 47.5
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 9.1e-222 774.6 1094 44.2
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 6.5e-220 768.5 1044 44.3
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 1.5e-219 767.3 1096 42.3
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 2.5e-219 766.5 1094 42.3
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 8.8e-217 758.1 1059 49.0
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 1.8e-214 750.4 888 49.4
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 1.8e-201 707.2 1151 40.6
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 3.1e-201 706.4 1026 43.8
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 1.9e-195 687.2 900 45.4
SMO364G0410 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 3.0e-180 636.7 1052 39.9
Pp3c11_11190 Physcomitrium patens HOM05D004178 ORTHO05D005204 2.1e-170 604.0 1007 37.8
unitig_37.g12493 Utricularia gibba HOM05D004178 ORTHO05D005204 4.8e-170 602.8 1002 40.9
HPP92_022323 Vanilla planifolia HOM05D004178 ORTHO05D005204 1.2e-160 571.6 725 47.9
Atru.chr1.752 Acer truncatum HOM05D004178 ORTHO05D005204 1.6e-157 561.2 722 46.3
COL.COLO4_14102 Corchorus olitorius HOM05D004178 ORTHO05D005204 7.9e-157 558.9 808 44.3
HPP92_022331 Vanilla planifolia HOM05D004178 ORTHO05D005204 7.9e-157 558.9 599 53.1
BcaC03g13191 Brassica carinata HOM05D004178 ORTHO05D005204 2.0e-152 544.3 463 73.2
Mapoly0003s0057 Marchantia polymorpha HOM05D004178 ORTHO05D005204 1.7e-151 541.2 1039 34.0
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 3.3e-139 500.4 1014 35.0
Oeu021707.2 Olea europaea HOM05D004178 ORTHO05D005204 4.6e-133 479.9 764 47.6
FAN03G2333 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.1e-121 442.2 574 47.7
PGSC0003DMG400014287 Solanum tuberosum HOM05D004178 ORTHO05D005204 4.5e-120 436.8 523 46.7
FAN10G1085 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.8e-108 398.3 379 58.6
AUR62002220 Chenopodium quinoa HOM05D004178 ORTHO05D005204 3.0e-108 397.5 762 37.9
CAN.G515.10 Capsicum annuum HOM05D004178 ORTHO05D005204 4.0e-108 397.1 330 64.5
Atru.chr1.753 Acer truncatum HOM05D004178 ORTHO05D005204 3.0e-100 370.9 277 68.6
Hund11836 Selenicereus undatus HOM05D004178 ORTHO05D005204 1.4e-92 345.5 268 66.0
SEGI_03190 Sequoiadendron giganteum HOM05D004178 ORTHO05D005204 1.4e-89 335.5 430 46.7
BolC2t06288H Brassica oleracea HOM05D004178 ORTHO05D005204 1.6e-80 305.4 226 75.2
HPP92_027283 Vanilla planifolia HOM05D004178 ORTHO05D005204 1.6e-80 305.4 380 46.3
CAN.G515.9 Capsicum annuum HOM05D004178 ORTHO05D005204 7.3e-78 296.6 394 52.3
Ca_30729_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 7.3e-78 296.6 282 55.3
Oeu021706.1 Olea europaea HOM05D004178 ORTHO05D005204 3.6e-77 294.3 282 55.7
AL6G18010 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.8e-76 292.0 178 84.3
MCO11G708 Micromonas commoda HOM05D004178 ORTHO05D005204 7.5e-75 286.6 1043 26.5
Os09g0121050 Oryza sativa ssp. japonica HOM05D004178 ORTHO05D005204 1.9e-65 255.4 554 32.9
AL1G57860 Arabidopsis lyrata HOM05D004178 ORTHO05D005039 4.0e-60 237.7 223 59.6
Cpa.g.sc121.6 Carica papaya HOM05D004178 ORTHO05D005204 4.9e-58 230.7 213 56.3
Psat3g047440 Pisum sativum HOM05D004178 ORTHO05D005204 1.4e-57 229.2 197 59.4
CBR_g34600 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-57 227.3 914 25.1
Ca_27645_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 4.0e-52 211.1 155 69.0
Ah.02g120680 Amaranthus hybridus HOM05D004178 ORTHO05D005204 6.9e-52 210.3 292 44.2
PRCOL_00006025 Prasinoderma coloniale HOM05D004178 ORTHO05D005204 3.2e-49 201.4 1059 24.8
Glyma.12G006400 Glycine max HOM05D004178 ORTHO05D005204 3.9e-47 194.5 178 56.7
Cpa.g.sc1936.1 Carica papaya HOM05D004178 ORTHO05D005204 5.6e-46 190.7 221 59.3
Ca_02789_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 1.4e-44 186.0 175 56.6
Cpa.g.sc121.1 Carica papaya HOM05D004178 ORTHO05D005204 1.3e-42 179.5 120 77.5
CARHR205510 Cardamine hirsuta HOM05D004178 ORTHO05D005204 1.7e-42 179.1 110 80.9
Cfa025728 Carpinus fangiana HOM05D004178 ORTHO05D005204 4.3e-38 164.5 1057 21.1
Cre12.g525050 Chlamydomonas reinhardtii HOM05D004178 ORTHO05D005204 5.6e-38 164.1 1136 24.9
SHI13977 Sapria himalayana HOM05D004178 ORTHO05D005204 9.6e-38 163.3 136 61.0
Ca_02791_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 3.8e-34 151.4 118 61.9
AUR62042657 Chenopodium quinoa HOM05D004178 ORTHO05D005204 1.2e-32 146.4 178 48.9
GSVIVG01014042001 Vitis vinifera HOM05D004178 ORTHO05D005204 5.1e-31 141.0 134 56.7
Haze_26632 Corylus avellana HOM05D004178 ORTHO05D005204 1.1e-25 123.2 1139 20.5
Ca_02792_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 8.7e-23 113.6 218 37.2
DCAR_014618 Daucus carota HOM05D004178 ORTHO05D005204 1.9e-22 112.5 115 56.5
GSVIVG01014044001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.6e-21 109.4 73 78.1
SMO117G0047 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 2.4e-20 105.5 144 38.2
Sp7g06190 Schrenkiella parvula HOM05D004178 ORTHO05D005204 5.9e-19 100.9 189 34.9
Cpa.g.sc121.4 Carica papaya HOM05D004178 ORTHO05D005204 1.6e-16 92.8 98 53.1
Os09g0121000 Oryza sativa ssp. japonica HOM05D004178 ORTHO05D005204 4.6e-16 91.3 117 46.2
SMO137G0368 Selaginella moellendorffii HOM05D027672 ORTHO05D005204 7.9e-16 90.5 123 34.1
SMO202G0076 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 2.3e-15 89.0 164 34.8
GSVIVG01014041001 Vitis vinifera HOM05D004178 ORTHO05D005204 4.4e-14 84.7 92 50.0
SMO302G0053 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 3.7e-13 81.6 175 33.1
AUR62042656 Chenopodium quinoa HOM05D004178 ORTHO05D005204 2.0e-11 75.9 56 71.4
SHI13970 Sapria himalayana HOM05D004178 ORTHO05D005204 6.7e-07 60.8 143 30.8
QL07p015796 Quercus lobata HOM05D004178 ORTHO05D005204 1.1e-06 60.1 64 48.4
PGSC0003DMG403030108 Solanum tuberosum HOM05D004178 ORTHO05D005204 1.1e-06 60.1 106 38.7
Cre12.g525100 Chlamydomonas reinhardtii HOM05D004178 ORTHO05D005204 4.4e-06 58.2 656 20.6
Medtr1g018410 Medicago truncatula HOM05D004178 ORTHO05D005204 7.4e-06 57.4 68 48.5


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