Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05191 Brassica carinata HOM05D003208 ORTHO05D015518 7.2e-59 230.3 113 100.0
Thhalv10000064m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 4.4e-40 167.9 108 78.7
BcaNung05188 Brassica carinata HOM05D003208 ORTHO05D004103 3.1e-38 161.8 155 60.6
BraA01t00090Z Brassica rapa HOM05D003208 ORTHO05D004103 1.2e-37 159.8 154 59.1
A01p00920 Brassica napus HOM05D003208 ORTHO05D004103 1.5e-35 152.9 156 57.7
BcaNung00929 Brassica carinata HOM05D003208 ORTHO05D004103 4.0e-33 144.8 154 55.2
C01p01050 Brassica napus HOM05D003208 ORTHO05D004103 5.2e-33 144.4 154 55.2
BolC1t00102H Brassica oleracea HOM05D003208 ORTHO05D004103 5.2e-33 144.4 154 55.2
Thhalv10024482m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 4.4e-32 141.4 156 51.3
Sp7g35870 Schrenkiella parvula HOM05D003208 ORTHO05D004103 7.5e-32 140.6 157 52.2
AL7G12310 Arabidopsis lyrata HOM05D003208 ORTHO05D004103 9.8e-32 140.2 157 54.1
CARHR246680 Cardamine hirsuta HOM05D003208 ORTHO05D004103 2.8e-31 138.7 154 51.9
AT4G40000 Arabidopsis thaliana HOM05D003208 ORTHO05D004103 3.7e-31 138.3 157 53.5
Carub.0007s0196 Capsella rubella HOM05D003208 ORTHO05D004103 8.3e-31 137.1 157 51.6
Aa31LG6G15240 Aethionema arabicum HOM05D003208 ORTHO05D004103 9.5e-27 123.6 158 46.2
Carub.0004s0156 Capsella rubella HOM05D003208 ORTHO05D004103 2.3e-25 119.0 157 45.9
CARHR113590 Cardamine hirsuta HOM05D003208 ORTHO05D004103 6.8e-25 117.5 172 44.8
Thhalv10000050m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 2.2e-23 112.5 169 42.6
BcaC02g08709 Brassica carinata HOM05D003208 ORTHO05D004103 6.4e-23 110.9 169 43.2
A04p16880 Brassica napus HOM05D003208 ORTHO05D004103 6.4e-23 110.9 169 43.2
C04p51440 Brassica napus HOM05D003208 ORTHO05D004103 6.4e-23 110.9 169 43.2
BolC4t26736H Brassica oleracea HOM05D003208 ORTHO05D004103 6.4e-23 110.9 169 42.6
BraA04t17321Z Brassica rapa HOM05D003208 ORTHO05D004103 6.4e-23 110.9 169 43.2
Gohir.A02G129100 Gossypium hirsutum HOM05D003208 ORTHO05D004103 6.4e-23 110.9 168 42.9
THA.LOC104807678 Tarenaya hassleriana HOM05D003208 ORTHO05D004103 6.4e-23 110.9 165 42.4
Glyma.08G133700 Glycine max HOM05D003208 ORTHO05D004103 1.1e-22 110.2 177 42.4
BcaC02g08664 Brassica carinata HOM05D003208 ORTHO05D004103 4.1e-22 108.2 172 41.9
BcaC02g08665 Brassica carinata HOM05D003208 ORTHO05D004103 4.1e-22 108.2 172 41.9
Manes.12G131000 Manihot esculenta HOM05D003208 ORTHO05D004103 5.4e-22 107.8 167 43.1
Aa31LG7G14430 Aethionema arabicum HOM05D003208 ORTHO05D004103 7.0e-22 107.5 174 40.8
Medtr8g089980 Medicago truncatula HOM05D003208 ORTHO05D004103 7.0e-22 107.5 178 41.0
Sp4g01430 Schrenkiella parvula HOM05D003208 ORTHO05D004103 7.0e-22 107.5 172 41.3
GSVIVG01003416001 Vitis vinifera HOM05D003208 ORTHO05D004103 7.0e-22 107.5 170 42.4
Thecc.01G096900 Theobroma cacao HOM05D003208 ORTHO05D004103 9.2e-22 107.1 173 41.6
CANSAT01G1547 Cannabis sativa HOM05D003208 ORTHO05D004103 1.2e-21 106.7 171 40.9
TPR.G6241 Trifolium pratense HOM05D003208 ORTHO05D004103 1.2e-21 106.7 180 40.6
BcaB08g35063 Brassica carinata HOM05D003208 ORTHO05D004103 1.6e-21 106.3 172 39.5
C08p40800 Brassica napus HOM05D003208 ORTHO05D004103 1.6e-21 106.3 169 40.2
Duzib147G1622 Durio zibethinus HOM05D003208 ORTHO05D004103 1.6e-21 106.3 169 43.2
Potri.007G096100 Populus trichocarpa HOM05D003208 ORTHO05D004103 1.6e-21 106.3 167 42.5
AL4G11900 Arabidopsis lyrata HOM05D003208 ORTHO05D004103 2.0e-21 105.9 172 40.7
BcaC07g41076 Brassica carinata HOM05D003208 ORTHO05D004103 2.0e-21 105.9 167 40.7
BolC8t51644H Brassica oleracea HOM05D003208 ORTHO05D004103 2.0e-21 105.9 167 40.7
Sabra07G0079200 Salix brachista HOM05D003208 ORTHO05D004103 2.0e-21 105.9 167 41.9
TWI74G0107 Tripterygium wilfordii HOM05D003208 ORTHO05D004103 2.7e-21 105.5 169 40.2
AT2G22400 Arabidopsis thaliana HOM05D003208 ORTHO05D004103 3.5e-21 105.1 172 41.3
A09p57600 Brassica napus HOM05D003208 ORTHO05D004103 3.5e-21 105.1 172 41.3
ClCG01G018610 Citrullus lanatus HOM05D003208 ORTHO05D004103 3.5e-21 105.1 166 40.4
Psat7g057040 Pisum sativum HOM05D003208 ORTHO05D004103 4.6e-21 104.8 178 40.4
COL.COLO4_27282 Corchorus olitorius HOM05D003208 ORTHO05D004103 7.8e-21 104.0 162 42.0
Lj2C541T5 Lonicera japonica HOM05D003208 ORTHO05D004103 7.8e-21 104.0 174 41.4
Sc03g0000100 Simmondsia chinensis HOM05D003208 ORTHO05D004103 7.8e-21 104.0 160 40.6
SGA_v2.0_scaffold111G31500 Striga asiatica HOM05D003208 ORTHO05D004103 7.8e-21 104.0 174 40.2
MELO3C007741.2 Cucumis melo HOM05D003208 ORTHO05D004103 1.0e-20 103.6 175 38.9
Hma1.2p1_0019F.1_g013690 Hydrangea macrophylla HOM05D003208 ORTHO05D004103 1.0e-20 103.6 177 39.5
Lalb_Chr07g0185301 Lupinus albus HOM05D003208 ORTHO05D004103 1.3e-20 103.2 174 41.4
Dinv13221 Davidia involucrata HOM05D003208 ORTHO05D004103 1.7e-20 102.8 176 41.5
EL10Ac6g14824 Beta vulgaris HOM05D003208 ORTHO05D004103 2.3e-20 102.4 174 40.8
CiPaw.03G144800 Carya illinoinensis HOM05D003208 ORTHO05D004103 2.3e-20 102.4 177 37.9
BraA09t41152Z Brassica rapa HOM05D003208 ORTHO05D004103 3.0e-20 102.1 172 40.7
CsaV3_6G045280 Cucumis sativus L. HOM05D003208 ORTHO05D004103 3.0e-20 102.1 175 39.4
Glyma.11G241400 Glycine max HOM05D003208 ORTHO05D004103 3.0e-20 102.1 173 41.0
Gorai.003G041000 Gossypium raimondii HOM05D003208 ORTHO05D004103 3.0e-20 102.1 168 41.1
Rhsim10G0166900 Rhododendron simsii HOM05D003208 ORTHO05D004103 3.0e-20 102.1 175 40.0
Lj4g0011115 Lotus japonicus HOM05D003208 ORTHO05D004103 3.9e-20 101.7 169 42.6
Lj6g0024442 Lotus japonicus HOM05D003208 ORTHO05D004103 3.9e-20 101.7 175 41.7
VMungo0251G3398 Vigna mungo HOM05D003208 ORTHO05D004103 3.9e-20 101.7 180 38.9
Ca_17757_v3 Cicer arietinum L. HOM05D003208 ORTHO05D004103 5.0e-20 101.3 177 40.7
Ciclev10024895m.g Citrus clementina HOM05D003208 ORTHO05D004103 5.0e-20 101.3 169 40.8
Phvul.002G261300 Phaseolus vulgaris HOM05D003208 ORTHO05D004103 5.0e-20 101.3 173 39.3
TWI77G0296 Tripterygium wilfordii HOM05D003208 ORTHO05D004103 5.0e-20 101.3 170 40.6
DCAR_003477 Daucus carota HOM05D003208 ORTHO05D004103 6.6e-20 100.9 173 39.3
Gohir.D03G039900 Gossypium hirsutum HOM05D003208 ORTHO05D004103 6.6e-20 100.9 168 40.5
Medtr3g086950 Medicago truncatula HOM05D003208 ORTHO05D004103 6.6e-20 100.9 165 40.6
VMungo1383G1326 Vigna mungo HOM05D003208 ORTHO05D004103 6.6e-20 100.9 175 40.6
Peaxi162Scf00044g00112 Petunia axillaris HOM05D003208 ORTHO05D004103 8.6e-20 100.5 175 40.0
TPR.G15995 Trifolium pratense HOM05D003208 ORTHO05D004103 8.6e-20 100.5 164 41.5
CAN.G151.12 Capsicum annuum HOM05D003208 ORTHO05D004103 1.1e-19 100.1 174 40.8
MD01G1034300 Malus domestica HOM05D003208 ORTHO05D004103 1.1e-19 100.1 173 39.9
Ca_16514_v3 Cicer arietinum L. HOM05D003208 ORTHO05D004103 1.5e-19 99.8 164 42.1
ECA246G0394 Erigeron canadensis HOM05D003208 ORTHO05D004103 1.5e-19 99.8 161 39.8
Lalb_Chr13g0295911 Lupinus albus HOM05D003208 ORTHO05D004103 1.5e-19 99.8 174 39.7
Peaxi162Scf00381g00061 Petunia axillaris HOM05D003208 ORTHO05D004103 1.5e-19 99.8 175 40.6
TAR628G1304 Trochodendron aralioides HOM05D003208 ORTHO05D004103 1.5e-19 99.8 196 34.7
Cfa002613 Carpinus fangiana HOM05D003208 ORTHO05D004103 1.9e-19 99.4 179 38.5
Nitab4.5_0000128g0250 Nicotiana tabacum HOM05D003208 ORTHO05D004103 1.9e-19 99.4 169 40.2
Sopen11g004910 Solanum pennellii HOM05D003208 ORTHO05D004103 1.9e-19 99.4 172 39.0
QL06p048297 Quercus lobata HOM05D003208 ORTHO05D004103 2.5e-19 99.0 179 36.9
Solyc05g051520.3 Solanum lycopersicum HOM05D003208 ORTHO05D004103 2.5e-19 99.0 175 40.0
Sopen05g029940 Solanum pennellii HOM05D003208 ORTHO05D004103 2.5e-19 99.0 175 40.0
vmacro12976 Vaccinium macrocarpon HOM05D003208 ORTHO05D004103 2.5e-19 99.0 175 40.0
AUR62003252 Chenopodium quinoa HOM05D003208 ORTHO05D004103 3.3e-19 98.6 169 39.6
PGR102G0950 Punica granatum HOM05D003208 ORTHO05D004103 3.3e-19 98.6 175 38.9
arahy.Tifrunner.gnm1.ann1.56KYQ9 Arachis hypogaea HOM05D003208 ORTHO05D004103 4.3e-19 98.2 173 41.0
PGSC0003DMG400016157 Solanum tuberosum HOM05D003208 ORTHO05D004103 4.3e-19 98.2 172 38.4
Actinidia19997 Actinidia chinensis HOM05D003208 ORTHO05D004103 5.6e-19 97.8 175 40.6
Cpa.g.sc55.83 Carica papaya HOM05D003208 ORTHO05D004103 5.6e-19 97.8 170 38.8
Atru.chr3.1361 Acer truncatum HOM05D003208 ORTHO05D004103 7.3e-19 97.4 168 38.7
Prupe.6G191700 Prunus persica HOM05D003208 ORTHO05D004103 7.3e-19 97.4 175 38.9
SalBow3G0841 Salvia bowleyana HOM05D003208 ORTHO05D004103 7.3e-19 97.4 174 41.4
SalBow3G1582 Salvia bowleyana HOM05D003208 ORTHO05D004103 7.3e-19 97.4 174 41.4
Sed0002614 Sechium edule HOM05D003208 ORTHO05D004103 7.3e-19 97.4 175 37.7
Solyc11g010110.3 Solanum lycopersicum HOM05D003208 ORTHO05D004103 7.3e-19 97.4 172 39.0
Migut.H02342 Erythranthe guttata HOM05D003208 ORTHO05D004103 9.5e-19 97.1 174 38.5
Nn5g30027 Nelumbo nucifera HOM05D003208 ORTHO05D004103 9.5e-19 97.1 196 35.2
Psat5g090760 Pisum sativum HOM05D003208 ORTHO05D004103 9.5e-19 97.1 165 39.4
Cc07_g14750 Coffea canephora HOM05D003208 ORTHO05D004103 1.2e-18 96.7 176 39.8
Lsat_1_v5_gn_5_45360 Lactuca sativa HOM05D003208 ORTHO05D004103 1.2e-18 96.7 154 39.0
Ah.02g126130 Amaranthus hybridus HOM05D003208 ORTHO05D004103 1.6e-18 96.3 176 40.3
AUR62027218 Chenopodium quinoa HOM05D003208 ORTHO05D004103 1.6e-18 96.3 169 39.6
Sed0018597 Sechium edule HOM05D003208 ORTHO05D004103 1.6e-18 96.3 172 38.4
Nitab4.5_0002604g0040 Nicotiana tabacum HOM05D003208 ORTHO05D004103 2.1e-18 95.9 178 38.2
unitig_699.g19581 Utricularia gibba HOM05D003208 ORTHO05D004103 2.8e-18 95.5 170 40.6
HanXRQChr07g0196311 Helianthus annuus HOM05D003208 ORTHO05D004103 3.6e-18 95.1 165 37.6
PSO675G0282 Papaver somniferum HOM05D003208 ORTHO05D004103 3.6e-18 95.1 179 38.5
Phvul.001G253400 Phaseolus vulgaris HOM05D003208 ORTHO05D004103 3.6e-18 95.1 185 38.9
Nitab4.5_0012684g0010 Nicotiana tabacum HOM05D003208 ORTHO05D004103 4.7e-18 94.7 169 39.6
Eucgr.H04746 Eucalyptus grandis HOM05D003208 ORTHO05D004103 6.2e-18 94.4 172 40.1
FAN23G1395 Fragaria x ananassa HOM05D003208 ORTHO05D004103 6.2e-18 94.4 172 40.1
FAN28G0091 Fragaria x ananassa HOM05D003208 ORTHO05D004103 6.2e-18 94.4 172 40.1
RcHm_v2.0_Chr2g0112501 Rosa chinensis HOM05D003208 ORTHO05D004103 6.2e-18 94.4 175 38.3
FvH4_1g20370 Fragaria vesca HOM05D003208 ORTHO05D004103 8.0e-18 94.0 172 39.5
PSO541G6125 Papaver somniferum HOM05D003208 ORTHO05D004103 1.4e-17 93.2 192 35.9
FAN26G2141 Fragaria x ananassa HOM05D003208 ORTHO05D004103 2.3e-17 92.4 172 39.5
Mapoly0022s0008 Marchantia polymorpha HOM05D003208 ORTHO05D004103 2.3e-17 92.4 176 36.9
Oeu056635.1 Olea europaea HOM05D003208 ORTHO05D004103 2.3e-17 92.4 173 40.5
CAN.G905.28 Capsicum annuum HOM05D003208 ORTHO05D004103 3.1e-17 92.0 168 38.1
MD15G1321600 Malus domestica HOM05D003208 ORTHO05D004103 4.0e-17 91.7 176 35.2
PSO675G9385 Papaver somniferum HOM05D003208 ORTHO05D004103 6.8e-17 90.9 175 38.3
ATR0684G089 Amborella trichopoda HOM05D003208 ORTHO05D004103 8.9e-17 90.5 180 37.2
Aqoxy6G00734 Aquilegia oxysepala HOM05D003208 ORTHO05D004103 8.9e-17 90.5 188 37.2
Psat4g135800 Pisum sativum HOM05D003208 ORTHO05D015518 8.9e-17 90.5 166 38.6
Eucgr.I00532 Eucalyptus grandis HOM05D003208 ORTHO05D004103 1.2e-16 90.1 165 37.0
arahy.Tifrunner.gnm1.ann1.G6ARYH Arachis hypogaea HOM05D003208 ORTHO05D004103 1.5e-16 89.7 184 37.5
Psat6g077920 Pisum sativum HOM05D003208 ORTHO05D009148 1.5e-16 89.7 158 38.6
Zm00001eb315780 Zea mays HOM05D003208 ORTHO05D004103 1.5e-16 89.7 209 34.0
Psat7g145480 Pisum sativum HOM05D003208 ORTHO05D004103 3.4e-16 88.6 165 38.2
SMO165G0121 Selaginella moellendorffii HOM05D003208 ORTHO05D004103 3.4e-16 88.6 156 42.3
MSTRG.2578 Avicennia marina HOM05D003208 ORTHO05D004103 4.4e-16 88.2 174 36.2
MCO16G190 Micromonas commoda HOM05D003208 ORTHO05D004103 9.8e-16 87.0 130 41.5
PGR004G2195 Punica granatum HOM05D003208 ORTHO05D004103 3.7e-15 85.1 173 32.9
Cfa024691 Carpinus fangiana HOM05D003208 ORTHO05D005480 1.1e-14 83.6 142 37.3
Pp3c15_5210 Physcomitrium patens HOM05D003208 ORTHO05D004103 1.1e-14 83.6 166 35.5
Pp3c15_5220 Physcomitrium patens HOM05D003208 ORTHO05D004103 1.1e-14 83.6 166 35.5
MBI02_g27964_MAGBIO Magnolia biondii HOM05D003208 ORTHO05D004103 1.4e-14 83.2 201 33.3
Zm00001eb033550 Zea mays HOM05D003208 ORTHO05D004103 1.9e-14 82.8 186 34.9
AagrBONN_evm.TU.Sc2ySwM_368.2854 Anthoceros agrestis HOM05D003208 ORTHO05D004103 3.2e-14 82.0 212 31.1
Cre03.g179860 Chlamydomonas reinhardtii HOM05D003208 ORTHO05D004103 5.4e-14 81.3 133 39.1
Os09g0471900 Oryza sativa ssp. japonica HOM05D003208 ORTHO05D004103 5.4e-14 81.3 213 30.5
Os08g0484400 Oryza sativa ssp. japonica HOM05D003208 ORTHO05D004103 7.0e-14 80.9 185 33.5
CDE10G0727 Ceratophyllum demersum HOM05D003208 ORTHO05D004103 2.0e-13 79.3 181 34.3
HPP92_013098 Vanilla planifolia HOM05D003208 ORTHO05D004103 7.8e-13 77.4 187 31.0
HPP92_013110 Vanilla planifolia HOM05D003208 ORTHO05D004103 7.8e-13 77.4 187 31.0
MCO11G029 Micromonas commoda HOM05D003208 ORTHO05D004103 3.9e-12 75.1 134 36.6
PRCOL_00006481 Prasinoderma coloniale HOM05D003208 ORTHO05D004103 5.0e-12 74.7 152 37.5
Ca_04837_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 6.6e-12 74.3 166 35.5
PRCOL_00002419 Prasinoderma coloniale HOM05D003208 ORTHO05D004103 8.6e-12 73.9 141 37.6
PRCOL_00004940 Prasinoderma coloniale HOM05D003208 ORTHO05D004103 5.6e-11 71.2 187 32.1
CBR_g12754 Chara braunii HOM05D000019 ORTHO05D000048 7.3e-11 70.9 226 27.9
Glyma.05G176233 Glycine max HOM05D003208 ORTHO05D004103 9.5e-11 70.5 59 59.3
Nitab4.5_0000241g0270 Nicotiana tabacum HOM05D003208 ORTHO05D004103 1.2e-10 70.1 162 33.3
Haze_24868 Corylus avellana HOM05D003208 ORTHO05D004103 2.8e-10 68.9 45 66.7
MCO12G374 Micromonas commoda HOM05D003208 ORTHO05D004103 2.8e-10 68.9 139 37.4
SHI01116 Sapria himalayana HOM05D003208 ORTHO05D004103 8.1e-10 67.4 148 34.5
PSO675G7081 Papaver somniferum HOM05D003208 ORTHO05D004103 1.1e-09 67.0 35 82.9
PRCOL_00005625 Prasinoderma coloniale HOM05D003208 ORTHO05D004103 1.8e-09 66.2 166 32.5
Actinidia06543 Actinidia chinensis HOM05D003208 ORTHO05D004103 3.1e-09 65.5 42 69.0
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 4.0e-09 65.1 151 30.5
Haze_24867 Corylus avellana HOM05D003208 ORTHO05D004103 8.9e-09 63.9 33 90.9
Lalb_Chr23g0277531 Lupinus albus HOM05D003208 ORTHO05D004103 1.2e-08 63.5 34 88.2
PSO675G0168 Papaver somniferum HOM05D003208 ORTHO05D004103 2.0e-08 62.8 33 87.9
PSO675G5792 Papaver somniferum HOM05D003208 ORTHO05D004103 2.0e-08 62.8 33 87.9
Ca_27302_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 2.6e-08 62.4 51 56.9
Ca_30950_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 2.6e-08 62.4 51 56.9
Lalb_Chr23g0277521 Lupinus albus HOM05D003208 ORTHO05D004103 4.4e-08 61.6 86 46.5
Psat4g135880 Pisum sativum HOM05D001082 ORTHO05D005120 5.8e-08 61.2 64 51.6
Psat6g218640 Pisum sativum HOM05D001312 ORTHO05D001832 2.2e-07 59.3 34 82.4
SEGI_08254 Sequoiadendron giganteum HOM05D003208 ORTHO05D004103 1.1e-06 57.0 46 63.0


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