Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 5.9e-153 544.7 335 100.0
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 1.1e-130 470.7 361 79.2
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 1.1e-130 470.7 361 79.2
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 7.8e-129 464.5 321 82.6
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 1.1e-119 434.1 321 78.2
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 2.2e-115 419.9 331 73.7
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 3.4e-100 369.4 330 70.0
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 2.1e-97 360.1 331 68.3
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 1.3e-96 357.5 308 70.1
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 1.1e-93 347.8 301 70.1
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 5.3e-93 345.5 322 64.6
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 9.0e-93 344.7 323 65.0
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 5.8e-92 342.0 322 64.0
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 5.8e-92 342.0 322 64.0
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 8.4e-91 338.2 308 67.9
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 1.9e-90 337.0 323 64.1
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 2.5e-90 336.7 321 64.2
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 3.7e-78 296.2 335 57.6
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 2.0e-52 210.7 319 48.0
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 1.5e-50 204.5 266 51.1
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 5.5e-50 202.6 286 48.3
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 2.1e-49 200.7 276 49.3
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 8.0e-49 198.7 325 45.5
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 5.2e-48 196.1 272 49.3
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 8.8e-48 195.3 265 48.7
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.2e-47 194.9 328 44.2
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 2.2e-46 190.7 287 45.3
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 3.1e-45 186.8 271 47.6
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 4.1e-45 186.4 271 47.6
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 1.2e-44 184.9 293 44.7
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 5.9e-44 182.6 265 45.7
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 7.7e-44 182.2 267 46.4
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 1.3e-43 181.4 278 45.0
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 1.3e-43 181.4 284 45.1
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 1.7e-43 181.0 278 45.0
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 2.2e-43 180.6 268 45.5
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 2.9e-43 180.3 298 44.3
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 6.5e-43 179.1 344 41.3
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 1.1e-42 178.3 271 45.8
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.1e-42 178.3 272 47.1
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 1.5e-42 177.9 313 43.5
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 1.5e-42 177.9 279 45.2
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 3.2e-42 176.8 325 41.8
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 3.2e-42 176.8 269 43.1
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 3.2e-42 176.8 288 44.4
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 4.2e-42 176.4 280 45.4
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 4.2e-42 176.4 293 44.7
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 5.5e-42 176.0 313 43.1
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 5.5e-42 176.0 309 44.3
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 9.4e-42 175.3 270 42.2
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 1.2e-41 174.9 292 43.2
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 1.2e-41 174.9 284 43.7
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 2.1e-41 174.1 300 44.0
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 2.1e-41 174.1 293 44.0
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 2.1e-41 174.1 283 44.5
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 2.7e-41 173.7 285 43.9
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 2.7e-41 173.7 289 45.0
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 3.6e-41 173.3 293 42.7
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 3.6e-41 173.3 268 44.4
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 8.0e-41 172.2 272 42.6
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 8.0e-41 172.2 342 38.9
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 8.0e-41 172.2 315 41.6
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 1.4e-40 171.4 272 44.1
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 1.8e-40 171.0 309 41.1
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 3.0e-40 170.2 302 44.4
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 1.2e-39 168.3 326 41.4
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 2.6e-39 167.2 313 43.1
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 3.4e-39 166.8 345 39.4
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 3.4e-39 166.8 320 42.8
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 1.7e-38 164.5 270 45.2
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 2.2e-38 164.1 320 41.2
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 2.2e-38 164.1 320 41.2
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 3.7e-38 163.3 348 39.9
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 8.3e-38 162.2 323 40.6
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 1.1e-37 161.8 282 42.9
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 1.4e-37 161.4 320 40.9
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 1.4e-37 161.4 296 41.9
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 1.4e-37 161.4 338 40.5
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 5.4e-37 159.5 308 42.5
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 5.4e-37 159.5 306 40.2
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 9.1e-37 158.7 282 42.6
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 2.0e-36 157.5 306 39.9
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 2.7e-36 157.1 337 38.6
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 5.9e-36 156.0 287 40.8
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 1.3e-35 154.8 308 39.6
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 2.9e-35 153.7 331 38.4
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.9e-34 151.0 342 37.7
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 3.6e-33 146.7 323 37.2
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 3.0e-32 143.7 313 39.9
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 6.8e-32 142.5 266 42.1
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 1.5e-31 141.4 264 40.5
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 5.7e-31 139.4 257 40.1
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 2.4e-29 134.0 210 42.9
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 2.7e-28 130.6 398 32.9
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 6.6e-27 125.9 339 34.8
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 1.1e-26 125.2 257 38.5
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 4.3e-26 123.2 269 39.0
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 7.3e-26 122.5 298 36.6
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 2.8e-25 120.6 211 40.8
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 1.2e-23 115.2 206 42.2
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 4.6e-20 103.2 202 39.6
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 1.7e-19 101.3 211 38.4
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 2.5e-18 97.4 158 41.8
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 1.8e-16 91.3 287 33.4
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 3.1e-16 90.5 281 32.0
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 3.1e-16 90.5 344 32.0
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.5e-15 88.2 96 53.1
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 3.4e-15 87.0 98 50.0
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 6.2e-09 66.2 194 35.6
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 1.4e-08 65.1 282 28.0
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 1.7e-06 58.2 88 44.3


User provided reference genes

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