Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 3.3e-218 761.5 410 100.0
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 5.6e-194 681.0 410 89.3
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 5.6e-194 681.0 410 89.3
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.8e-192 676.0 410 88.8
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 1.5e-191 672.9 409 88.8
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 2.9e-190 668.7 411 89.5
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 2.9e-190 668.7 411 89.5
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 4.6e-188 661.4 416 85.6
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.5e-183 646.4 410 86.1
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 1.4e-176 623.2 408 83.8
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 3.0e-171 605.5 410 79.3
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 7.6e-159 564.3 425 73.9
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 2.2e-145 519.6 423 69.5
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.3e-134 483.8 404 64.9
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.3e-134 483.8 404 64.9
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.5e-134 481.1 405 64.4
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 1.1e-133 480.7 396 65.7
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.5e-133 479.6 405 64.4
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 3.2e-133 479.2 396 64.9
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 9.4e-133 477.6 394 65.2
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.1e-132 476.5 396 65.9
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.4e-131 473.8 393 67.7
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 3.9e-131 472.2 378 67.7
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 5.1e-131 471.9 371 70.1
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.8e-131 471.1 405 63.2
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.1e-130 470.7 428 61.9
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.0e-130 469.9 407 65.4
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 3.3e-130 469.2 397 66.2
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 5.7e-130 468.4 402 64.2
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 8.2e-129 464.5 403 64.0
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 2.4e-128 463.0 387 64.9
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 3.1e-128 462.6 371 69.8
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 7.0e-128 461.5 399 64.2
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 7.0e-128 461.5 396 64.9
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 9.1e-128 461.1 388 65.7
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.5e-127 460.3 373 72.1
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 3.5e-127 459.1 393 67.7
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 5.9e-127 458.4 379 67.5
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 7.7e-127 458.0 414 60.4
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 1.1e-125 454.1 388 62.9
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.5e-125 453.8 374 66.6
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 1.9e-125 453.4 390 67.4
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 7.2e-125 451.4 412 62.9
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 1.6e-124 450.3 403 63.8
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.6e-124 450.3 411 64.5
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 6.1e-124 448.4 409 64.5
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 1.0e-123 447.6 390 66.2
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.4e-123 447.2 412 58.5
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.4e-123 447.2 410 65.4
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 3.0e-123 446.0 391 63.9
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 6.7e-123 444.9 383 63.4
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 8.8e-123 444.5 385 62.3
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 9.7e-122 441.0 408 63.0
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 2.8e-121 439.5 286 83.9
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 3.7e-121 439.1 389 65.3
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.8e-120 436.8 397 59.7
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 2.4e-120 436.4 415 61.9
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 2.4e-120 436.4 399 61.4
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 9.1e-120 434.5 374 64.7
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 9.1e-120 434.5 408 61.0
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 3.5e-119 432.6 404 60.6
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 4.5e-119 432.2 396 62.4
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 5.9e-119 431.8 369 67.2
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 5.0e-118 428.7 437 57.4
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 8.5e-118 427.9 407 61.9
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 3.2e-117 426.0 413 58.8
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 4.2e-117 425.6 386 60.4
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.2e-116 424.1 406 59.6
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 3.6e-116 422.5 390 60.5
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 6.1e-116 421.8 342 68.1
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.4e-115 420.6 380 64.7
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 3.0e-115 419.5 400 61.2
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 4.0e-115 419.1 403 60.0
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 4.0e-115 419.1 466 54.7
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 6.8e-115 418.3 328 66.8
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 1.1e-112 411.0 397 61.0
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 1.4e-112 410.6 391 57.0
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 7.0e-112 408.3 388 56.2
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 7.0e-112 408.3 299 70.9
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.7e-110 403.7 385 57.4
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 2.2e-110 403.3 293 72.4
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 5.5e-109 398.7 292 74.0
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 7.2e-109 398.3 300 69.7
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 2.1e-108 396.7 296 69.6
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.6e-108 396.0 300 68.7
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.4e-107 394.0 302 67.5
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 2.3e-107 393.3 280 71.1
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 1.8e-104 383.6 253 76.7
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 7.0e-104 381.7 401 52.4
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.3e-102 376.7 295 66.8
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 1.5e-101 374.0 409 54.8
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 4.7e-100 369.0 293 67.2
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 2.3e-99 366.7 265 67.9
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.9e-97 359.8 383 56.1
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 3.7e-97 359.4 369 56.9
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 7.3e-93 345.1 430 47.4
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 2.3e-91 340.1 214 77.1
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 4.1e-88 329.3 420 49.3
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 9.2e-88 328.2 365 54.2
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 2.0e-87 327.0 287 56.8
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.7e-86 323.9 253 68.4
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 4.4e-82 309.3 246 67.9
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.7e-81 307.4 391 50.4
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.4e-80 304.3 285 60.0
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.7e-79 300.1 403 47.9
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 1.7e-78 297.4 168 89.3
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.5e-74 284.3 334 51.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.6e-74 283.5 203 72.4
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.8e-67 260.8 214 65.0
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 3.0e-62 243.4 264 50.8
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 3.9e-62 243.0 197 60.4
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.8e-52 210.3 262 50.4
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 9.0e-51 205.3 305 46.2
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 4.0e-43 179.9 187 46.0
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 7.6e-42 175.6 312 36.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 5.0e-33 146.4 172 53.5
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.9e-32 144.4 216 37.5
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.1e-27 128.6 158 48.1
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 5.3e-19 99.8 74 68.9
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 9.7e-13 79.0 177 32.2
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.1e-08 65.5 140 37.9
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.9e-08 64.7 109 41.3
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 3.2e-08 63.9 89 43.8


User provided reference genes

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