Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 1.4e-209 732.6 366 100.0
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 5.0e-178 627.9 357 88.2
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 5.0e-178 627.9 357 88.2
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.3e-173 613.2 359 86.6
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 3.7e-173 611.7 369 85.1
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 1.2e-171 606.7 355 86.8
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 3.8e-170 601.7 373 82.6
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 5.6e-169 597.8 377 83.0
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 9.8e-166 587.0 374 82.6
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 8.3e-165 583.9 375 82.1
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 1.8e-164 582.8 404 76.5
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 1.2e-158 563.5 369 77.0
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 1.6e-155 553.1 316 86.4
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 3.5e-155 552.0 316 86.1
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 1.9e-153 546.2 316 85.4
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 3.3e-145 518.8 354 76.6
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 1.5e-142 510.0 370 69.5
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 8.4e-141 504.2 372 68.8
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 1.6e-139 500.0 349 71.9
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 4.6e-139 498.4 349 71.9
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 7.8e-139 497.7 369 68.0
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 2.3e-138 496.1 375 69.3
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 8.6e-138 494.2 366 69.7
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 3.3e-137 492.3 366 67.8
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 5.6e-137 491.5 360 68.9
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 1.4e-135 486.9 375 66.9
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 3.1e-135 485.7 366 67.2
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 5.8e-134 481.5 373 67.0
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 9.9e-134 480.7 365 65.8
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 9.9e-134 480.7 335 71.9
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 2.9e-133 479.2 376 66.5
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 4.9e-133 478.4 372 65.6
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 1.4e-132 476.9 365 67.1
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 5.4e-132 474.9 365 66.3
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 1.6e-131 473.4 371 64.2
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 2.1e-131 473.0 364 66.8
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 2.1e-131 473.0 367 65.1
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 3.5e-131 472.2 365 66.3
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 6.0e-131 471.5 374 66.0
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.0e-130 470.7 365 66.3
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 1.0e-130 470.7 371 67.4
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 3.9e-130 468.8 400 63.5
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 3.9e-130 468.8 376 64.4
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 5.1e-130 468.4 365 66.3
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 6.6e-130 468.0 376 64.9
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 1.1e-129 467.2 373 64.3
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 1.1e-129 467.2 376 63.6
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 1.9e-129 466.5 363 65.8
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 2.5e-129 466.1 362 66.0
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 2.5e-129 466.1 354 66.9
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 5.6e-129 464.9 358 66.5
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 5.6e-129 464.9 332 71.1
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 1.3e-128 463.8 375 63.5
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 6.2e-128 461.5 357 66.4
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 6.2e-128 461.5 375 65.6
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 1.1e-127 460.7 363 66.7
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 1.1e-127 460.7 363 64.7
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 2.4e-127 459.5 379 63.3
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 3.1e-127 459.1 378 64.0
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 2.0e-126 456.4 401 60.3
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 7.6e-126 454.5 349 66.5
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 7.6e-126 454.5 359 67.1
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 1.3e-125 453.8 356 66.6
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 4.9e-125 451.8 404 59.7
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 1.4e-124 450.3 376 60.9
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 1.4e-124 450.3 390 61.0
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 2.4e-124 449.5 474 52.7
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 3.2e-124 449.1 359 65.5
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 4.2e-124 448.7 362 64.9
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 9.3e-124 447.6 372 63.2
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 3.9e-122 442.2 326 67.8
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 5.1e-122 441.8 357 63.3
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 5.1e-122 441.8 366 64.2
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 6.6e-122 441.4 404 61.1
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 8.7e-122 441.0 321 69.8
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 1.5e-121 440.3 349 64.2
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 2.5e-121 439.5 356 65.4
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 5.6e-121 438.3 382 62.8
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 7.4e-121 438.0 376 61.7
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 3.6e-120 435.6 360 63.6
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 3.6e-120 435.6 360 62.5
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 4.8e-120 435.3 353 63.5
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 1.4e-119 433.7 335 64.5
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 4.0e-119 432.2 335 64.5
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 5.3e-119 431.8 319 68.0
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 1.2e-118 430.6 418 57.9
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.3e-117 427.2 365 62.5
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 1.1e-116 424.1 360 60.3
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 1.1e-116 424.1 360 60.3
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 4.2e-116 422.2 318 66.0
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 4.2e-116 422.2 372 60.2
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 7.1e-116 421.4 318 66.0
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 2.7e-107 392.9 315 63.5
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 3.0e-106 389.4 311 65.3
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 5.5e-100 368.6 311 62.1
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 1.0e-98 364.4 311 58.8
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 1.8e-95 353.6 361 52.1
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 8.8e-90 334.7 260 64.2
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 1.1e-89 334.3 362 53.3
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 3.7e-88 329.3 310 54.8
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 1.4e-87 327.4 263 64.3
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 2.0e-86 323.6 276 61.6
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 7.7e-86 321.6 218 73.9
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 5.0e-77 292.4 191 70.7
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 3.0e-74 283.1 452 39.6
CDE05G2927 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 1.1e-63 248.1 148 77.7
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 5.9e-62 242.3 186 65.6
Lsat_1_v5_gn_9_120240 Lactuca sativa HOM05D007027 ORTHO05D008765 4.4e-57 226.1 186 64.5
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 1.2e-54 218.0 372 39.0
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 1.4e-47 194.5 228 51.8
Migut.B00774 Erythranthe guttata HOM05D007027 ORTHO05D008765 3.6e-43 179.9 149 63.1
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 2.0e-33 147.5 136 57.4
RcHm_v2.0_Chr3g0481081 Rosa chinensis HOM05D007027 ORTHO05D008765 4.4e-33 146.4 79 84.8
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 2.3e-21 107.5 323 28.2
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 1.6e-19 101.3 315 27.6
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 8.9e-18 95.5 333 27.0
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 2.0e-17 94.4 334 25.1
Cre09.g405150 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 2.2e-16 90.9 348 28.4
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 4.9e-16 89.7 314 27.4
Lsat_1_v5_gn_1_39980 Lactuca sativa HOM05D006708 ORTHO05D008321 1.9e-15 87.8 322 26.1
MCO13G233 Micromonas commoda HOM05D006708 ORTHO05D008321 5.4e-15 86.3 315 27.0
COL.COLO4_34511 Corchorus olitorius HOM05D006708 ORTHO05D008321 1.6e-14 84.7 317 25.9
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 3.5e-14 83.6 197 28.9
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 3.5e-14 83.6 341 27.6
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 7.8e-14 82.4 313 25.9
MSTRG.24854 Avicennia marina HOM05D006708 ORTHO05D008321 1.0e-13 82.0 317 26.5
Aa31LG5G17510 Aethionema arabicum HOM05D006708 ORTHO05D008321 1.7e-13 81.3 331 25.1
Sp3g05900 Schrenkiella parvula HOM05D006708 ORTHO05D008321 1.7e-13 81.3 323 26.6
Zm00001eb245280 Zea mays HOM05D006708 ORTHO05D008321 1.7e-13 81.3 325 26.8
AT3G06950 Arabidopsis thaliana HOM05D006708 ORTHO05D008321 2.3e-13 80.9 326 27.0
TAR365G0272 Trochodendron aralioides HOM05D006708 ORTHO05D008321 2.3e-13 80.9 315 27.3
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 3.0e-13 80.5 341 27.3
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 3.9e-13 80.1 324 27.8
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 5.1e-13 79.7 318 25.8
Peaxi162Scf00164g00315 Petunia axillaris HOM05D006708 ORTHO05D008321 5.1e-13 79.7 317 26.5
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 5.1e-13 79.7 344 26.7
Duzib151G0010 Durio zibethinus HOM05D006708 ORTHO05D008321 6.6e-13 79.3 316 25.9
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 6.6e-13 79.3 339 26.8
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 8.7e-13 79.0 333 23.7
Migut.A01089 Erythranthe guttata HOM05D006708 ORTHO05D008321 1.1e-12 78.6 316 25.3
Gohir.A02G058800 Gossypium hirsutum HOM05D006708 ORTHO05D008321 1.1e-12 78.6 337 25.5
Gorai.005G073000 Gossypium raimondii HOM05D006708 ORTHO05D008321 1.1e-12 78.6 337 25.5
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 1.1e-12 78.6 315 27.0
SEGI_30443 Sequoiadendron giganteum HOM05D007027 ORTHO05D008765 1.9e-12 77.8 52 71.2
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 2.5e-12 77.4 317 25.6
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 3.3e-12 77.0 314 24.8
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 3.3e-12 77.0 314 24.8
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 3.3e-12 77.0 320 26.2
Hund22645 Selenicereus undatus HOM05D006708 ORTHO05D008321 3.3e-12 77.0 331 25.4
Nn3g21927 Nelumbo nucifera HOM05D006708 ORTHO05D008321 5.6e-12 76.3 329 26.1
SGA_v2.0_scaffold109G31012 Striga asiatica HOM05D006708 ORTHO05D008321 5.6e-12 76.3 197 28.9
ATR0796G062 Amborella trichopoda HOM05D006708 ORTHO05D008321 9.6e-12 75.5 330 25.8
Ciclev10005313m.g Citrus clementina HOM05D006708 ORTHO05D008321 9.6e-12 75.5 224 28.1
Dinv29501 Davidia involucrata HOM05D006708 ORTHO05D008321 1.3e-11 75.1 315 25.4
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 1.3e-11 75.1 317 24.9
GSVIVG01017693001 Vitis vinifera HOM05D006708 ORTHO05D008321 2.1e-11 74.3 317 25.6
Actinidia02537 Actinidia chinensis HOM05D006708 ORTHO05D008321 2.8e-11 73.9 318 25.2
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 2.8e-11 73.9 315 24.8
Medtr4g123970 Medicago truncatula HOM05D006708 ORTHO05D008321 2.8e-11 73.9 331 25.1
Thecc.04G313500 Theobroma cacao HOM05D006708 ORTHO05D008321 2.8e-11 73.9 318 25.2
EL10Ac3g06239 Beta vulgaris HOM05D006708 ORTHO05D008321 3.6e-11 73.6 315 23.8
Cre13.g591501 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 3.6e-11 73.6 326 25.2
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 1.4e-10 71.6 301 26.2
Aqoxy2G02504 Aquilegia oxysepala HOM05D006708 ORTHO05D008321 3.1e-10 70.5 324 25.6
TWI53G0094 Tripterygium wilfordii HOM05D006708 ORTHO05D008321 3.1e-10 70.5 330 25.5
Eucgr.B03960 Eucalyptus grandis HOM05D006708 ORTHO05D008321 4.0e-10 70.1 317 24.3
CARHR081550 Cardamine hirsuta HOM05D006708 ORTHO05D008321 1.5e-09 68.2 317 25.6
Nitab4.5_0001769g0170 Nicotiana tabacum HOM05D006708 ORTHO05D008321 9.9e-09 65.5 293 25.9
PRCOL_00002295 Prasinoderma coloniale HOM05D006708 ORTHO05D008321 1.2e-06 58.5 176 29.0
SEGI_32206 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 2.1e-06 57.8 74 36.5


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