Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21450 Brassica carinata HOM05D019225 ORTHO05D007811 1.2e-100 369.8 181 100.0
BolC9t56020H Brassica oleracea HOM05D000202 ORTHO05D000117 9.2e-24 114.4 53 100.0
C01p49910 Brassica napus HOM05D019225 ORTHO05D000065 8.1e-20 101.3 53 88.7
BcaC08g43978 Brassica carinata HOM05D019225 ORTHO05D032675 2.7e-15 86.3 87 55.2
C06p13810 Brassica napus HOM05D019225 ORTHO05D032675 2.7e-15 86.3 87 55.2
BolC6t36553H Brassica oleracea HOM05D019225 ORTHO05D032675 2.7e-15 86.3 87 55.2
Haze_22937 Corylus avellana HOM05D001472 ORTHO05D007811 3.5e-15 85.9 71 66.2
Lj2C498G7 Lonicera japonica HOM05D001472 ORTHO05D007811 7.8e-15 84.7 87 62.1
AL3G25400 Arabidopsis lyrata HOM05D001472 ORTHO05D007811 1.0e-14 84.3 76 67.1
CAN.G1834.11 Capsicum annuum HOM05D001472 ORTHO05D007811 1.0e-14 84.3 71 64.8
Cfa009558 Carpinus fangiana HOM05D001472 ORTHO05D007811 1.3e-14 84.0 71 64.8
Nn2g15862 Nelumbo nucifera HOM05D001472 ORTHO05D007811 1.3e-14 84.0 70 65.7
GSVIVG01025473001 Vitis vinifera HOM05D001472 ORTHO05D007811 1.3e-14 84.0 85 56.5
Zm00001eb063750 Zea mays HOM05D001472 ORTHO05D007811 1.3e-14 84.0 79 58.2
CiPaw.13G177500 Carya illinoinensis HOM05D001472 ORTHO05D007811 1.7e-14 83.6 70 65.7
Dinv13475 Davidia involucrata HOM05D001472 ORTHO05D007811 3.0e-14 82.8 70 64.3
PSO541G5145 Papaver somniferum HOM05D001472 ORTHO05D007811 3.0e-14 82.8 75 62.7
MD03G1003300 Malus domestica HOM05D001472 ORTHO05D007811 3.9e-14 82.4 89 58.4
Sc09g0000050 Simmondsia chinensis HOM05D001472 ORTHO05D007811 3.9e-14 82.4 64 70.3
Aqoxy5G00018 Aquilegia oxysepala HOM05D001472 ORTHO05D007811 5.1e-14 82.0 49 87.8
BcaC05g29175 Brassica carinata HOM05D001472 ORTHO05D007811 5.1e-14 82.0 49 87.8
A05p36040 Brassica napus HOM05D001472 ORTHO05D007811 5.1e-14 82.0 49 87.8
C05p54390 Brassica napus HOM05D001472 ORTHO05D007811 5.1e-14 82.0 49 87.8
Carub.0003s1296 Capsella rubella HOM05D001472 ORTHO05D007811 5.1e-14 82.0 49 87.8
Thhalv10020319m.g Eutrema salsugineum HOM05D001472 ORTHO05D007811 5.1e-14 82.0 49 87.8
Nitab4.5_0000551g0090 Nicotiana tabacum HOM05D001472 ORTHO05D007811 5.1e-14 82.0 61 73.8
Potri.003G221600 Populus trichocarpa HOM05D001472 ORTHO05D007811 5.1e-14 82.0 71 63.4
Sp3g11700 Schrenkiella parvula HOM05D001472 ORTHO05D007811 5.1e-14 82.0 49 87.8
BcaB04g18767 Brassica carinata HOM05D001472 ORTHO05D007811 6.6e-14 81.6 49 85.7
AUR62040899 Chenopodium quinoa HOM05D001472 ORTHO05D007811 6.6e-14 81.6 48 89.6
AUR62042626 Chenopodium quinoa HOM05D001472 ORTHO05D007811 6.6e-14 81.6 48 89.6
ECA233G2592 Erigeron canadensis HOM05D001472 ORTHO05D007811 6.6e-14 81.6 49 85.7
MBI07_g05483_MAGBIO Magnolia biondii HOM05D001472 ORTHO05D000014 6.6e-14 81.6 49 85.7
Nitab4.5_0006195g0050 Nicotiana tabacum HOM05D001472 ORTHO05D007811 6.6e-14 81.6 49 85.7
Peaxi162Scf00705g00617 Petunia axillaris HOM05D001472 ORTHO05D007811 6.6e-14 81.6 49 85.7
Prupe.6G002900 Prunus persica HOM05D001472 ORTHO05D007811 6.6e-14 81.6 89 57.3
Sabra03G0164900 Salix brachista HOM05D001472 ORTHO05D007811 6.6e-14 81.6 49 85.7
Actinidia16242 Actinidia chinensis HOM05D001472 ORTHO05D007811 8.6e-14 81.3 49 83.7
HanXRQChr13g0405211 Helianthus annuus HOM05D001472 ORTHO05D007811 8.6e-14 81.3 49 83.7
Lj6A106T27 Lonicera japonica HOM05D001472 ORTHO05D007811 8.6e-14 81.3 49 85.7
Lalb_Chr13g0290681 Lupinus albus HOM05D001472 ORTHO05D007811 8.6e-14 81.3 79 63.3
PSO675G5228 Papaver somniferum HOM05D001472 ORTHO05D007811 8.6e-14 81.3 75 61.3
AT3G13490 Arabidopsis thaliana HOM05D001472 ORTHO05D007811 1.1e-13 80.9 49 85.7
CARHR088160 Cardamine hirsuta HOM05D001472 ORTHO05D007811 1.1e-13 80.9 49 85.7
Manes.03G087300 Manihot esculenta HOM05D001472 ORTHO05D007811 1.1e-13 80.9 70 64.3
Os02g0623500 Oryza sativa ssp. japonica HOM05D001472 ORTHO05D007811 1.1e-13 80.9 64 70.3
Sed0027407 Sechium edule HOM05D001472 ORTHO05D007811 1.1e-13 80.9 64 68.8
THA.LOC104810321 Tarenaya hassleriana HOM05D001472 ORTHO05D007811 1.1e-13 80.9 49 85.7
Cpa.g.sc119.38 Carica papaya HOM05D001472 ORTHO05D007811 1.5e-13 80.5 48 87.5
DCAR_032192 Daucus carota HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 83.7
Migut.N00550 Erythranthe guttata HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 85.7
FvH4_3g45770 Fragaria vesca HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 83.7
FAN16G2109 Fragaria x ananassa HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 83.7
FAN21G3965 Fragaria x ananassa HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 83.7
FAN25G0602 Fragaria x ananassa HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 83.7
QL01p003604 Quercus lobata HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 83.7
RcHm_v2.0_Chr5g0083841 Rosa chinensis HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 83.7
TAR633G1259 Trochodendron aralioides HOM05D001472 ORTHO05D007811 1.5e-13 80.5 49 85.7
MSTRG.12798 Avicennia marina HOM05D001472 ORTHO05D007811 1.9e-13 80.1 48 87.5
EL10Ac4g10388 Beta vulgaris HOM05D001472 ORTHO05D007811 1.9e-13 80.1 48 87.5
CSS0028494 Camellia sinensis var. sinensis HOM05D001472 ORTHO05D007811 1.9e-13 80.1 49 83.7
Lj6C105T5 Lonicera japonica HOM05D001472 ORTHO05D007811 1.9e-13 80.1 49 85.7
Medtr8g007295 Medicago truncatula HOM05D001472 ORTHO05D007811 1.9e-13 80.1 49 85.7
Thecc.04G056800 Theobroma cacao HOM05D001472 ORTHO05D007811 1.9e-13 80.1 48 85.4
vmacro04243 Vaccinium macrocarpon HOM05D001472 ORTHO05D007811 1.9e-13 80.1 49 81.6
vmacro23198 Vaccinium macrocarpon HOM05D001472 ORTHO05D007811 1.9e-13 80.1 49 81.6
arahy.Tifrunner.gnm1.ann1.NSES8Z Arachis hypogaea HOM05D001472 ORTHO05D007811 2.5e-13 79.7 80 61.2
arahy.Tifrunner.gnm1.ann1.WM6SSU Arachis hypogaea HOM05D001472 ORTHO05D007811 2.5e-13 79.7 80 61.2
FAN11G2456 Fragaria x ananassa HOM05D001472 ORTHO05D007811 2.5e-13 79.7 49 81.6
VMungo0331G0364 Vigna mungo HOM05D001472 ORTHO05D007811 2.5e-13 79.7 49 83.7
Aa31LG8G690 Aethionema arabicum HOM05D001472 ORTHO05D007811 3.3e-13 79.3 49 83.7
BolC5t34105H Brassica oleracea HOM05D001472 ORTHO05D007811 3.3e-13 79.3 61 73.8
CDE10G0109 Ceratophyllum demersum HOM05D001472 ORTHO05D007811 3.3e-13 79.3 49 83.7
Sed0020866 Sechium edule HOM05D001472 ORTHO05D007811 3.3e-13 79.3 49 81.6
Ciclev10014735m.g Citrus clementina HOM05D001472 ORTHO05D007811 4.3e-13 79.0 49 79.6
MD11G1003100 Malus domestica HOM05D001472 ORTHO05D007811 4.3e-13 79.0 49 83.7
PGR119G2138 Punica granatum HOM05D001472 ORTHO05D007811 4.3e-13 79.0 49 81.6
Eucgr.J01764 Eucalyptus grandis HOM05D001472 ORTHO05D007811 5.6e-13 78.6 49 81.6
Lj2g0001026 Lotus japonicus HOM05D001472 ORTHO05D007811 5.6e-13 78.6 48 85.4
Oeu004752.1 Olea europaea HOM05D001472 ORTHO05D007811 5.6e-13 78.6 90 55.6
Rhsim05G0069400 Rhododendron simsii HOM05D001472 ORTHO05D007811 5.6e-13 78.6 49 79.6
Rhsim13G0233000 Rhododendron simsii HOM05D001472 ORTHO05D007811 5.6e-13 78.6 49 79.6
PGSC0003DMG400032166 Solanum tuberosum HOM05D001472 ORTHO05D007811 5.6e-13 78.6 61 70.5
MELO3C014727.2 Cucumis melo HOM05D001472 ORTHO05D007811 7.3e-13 78.2 64 67.2
Psat0s3030g0040 Pisum sativum HOM05D001472 ORTHO05D007811 7.3e-13 78.2 49 83.7
BraA05t22411Z Brassica rapa HOM05D001472 ORTHO05D007811 9.6e-13 77.8 46 89.1
Ca_14801_v3 Cicer arietinum L. HOM05D001472 ORTHO05D007811 9.6e-13 77.8 49 81.6
CsaV3_4G017540 Cucumis sativus L. HOM05D001472 ORTHO05D007811 9.6e-13 77.8 64 67.2
Oeu059655.1 Olea europaea HOM05D001472 ORTHO05D007811 9.6e-13 77.8 46 89.1
Phvul.010G046400 Phaseolus vulgaris HOM05D001472 ORTHO05D007811 9.6e-13 77.8 49 81.6
Hund16176 Selenicereus undatus HOM05D001472 ORTHO05D007811 9.6e-13 77.8 67 65.7
Solyc01g005540.4 Solanum lycopersicum HOM05D001472 ORTHO05D007811 9.6e-13 77.8 49 81.6
Sopen01g001560 Solanum pennellii HOM05D001472 ORTHO05D007811 9.6e-13 77.8 49 81.6
Cc01_g00140 Coffea canephora HOM05D001472 ORTHO05D007811 1.2e-12 77.4 69 63.8
Glyma.03G109000 Glycine max HOM05D001472 ORTHO05D007811 1.6e-12 77.0 49 81.6
HPP92_024255 Vanilla planifolia HOM05D002427 ORTHO05D002818 1.6e-12 77.0 49 79.6
HPP92_024267 Vanilla planifolia HOM05D001472 ORTHO05D007811 1.6e-12 77.0 49 79.6
Gohir.A08G014800 Gossypium hirsutum HOM05D001472 ORTHO05D007811 2.1e-12 76.6 49 79.6
Gohir.D08G025400 Gossypium hirsutum HOM05D001472 ORTHO05D007811 2.1e-12 76.6 49 79.6
Gorai.004G020700 Gossypium raimondii HOM05D001472 ORTHO05D007811 2.1e-12 76.6 49 79.6
SalBow3G3489 Salvia bowleyana HOM05D001472 ORTHO05D007811 2.1e-12 76.6 46 87.0
ATR1145G100 Amborella trichopoda HOM05D001472 ORTHO05D007811 2.8e-12 76.3 49 77.6
A03p38240 Brassica napus HOM05D001472 ORTHO05D007811 2.8e-12 76.3 47 85.1
SGA_v2.0_scaffold6G03312 Striga asiatica HOM05D001472 ORTHO05D007811 4.7e-12 75.5 46 84.8
Duzib168G2316 Durio zibethinus HOM05D001472 ORTHO05D007811 8.1e-12 74.7 47 80.9
MCO02G308 Micromonas commoda HOM05D001472 ORTHO05D007811 8.1e-12 74.7 48 79.2
Lsat_1_v5_gn_6_52060 Lactuca sativa HOM05D001472 ORTHO05D007811 1.1e-11 74.3 55 72.7
SMO194G0018 Selaginella moellendorffii HOM05D001472 ORTHO05D007811 1.4e-11 73.9 49 79.6
SMO358G0196 Selaginella moellendorffii HOM05D001472 ORTHO05D007811 1.4e-11 73.9 49 79.6
Pp3c19_5720 Physcomitrium patens HOM05D001472 ORTHO05D007811 1.8e-11 73.6 48 79.2
CBR_g46728 Chara braunii HOM05D001472 ORTHO05D007811 3.1e-11 72.8 47 78.7
Mapoly0003s0001 Marchantia polymorpha HOM05D001472 ORTHO05D007811 3.1e-11 72.8 48 77.1
CANSAT11G2257 Cannabis sativa HOM05D001472 ORTHO05D007811 5.2e-11 72.0 48 77.1
SMO358G0031 Selaginella moellendorffii HOM05D001472 ORTHO05D007811 8.9e-11 71.2 49 77.6
PRCOL_00005729 Prasinoderma coloniale HOM05D001472 ORTHO05D007811 4.4e-10 68.9 46 76.1
ATR0564G416 Amborella trichopoda HOM05D001472 ORTHO05D007811 6.4e-09 65.1 49 69.4
Cre06.g296250 Chlamydomonas reinhardtii HOM05D001472 ORTHO05D007811 6.0e-07 58.5 44 61.4
DCAR_017983 Daucus carota HOM05D001472 ORTHO05D002655 1.3e-06 57.4 53 54.7
Solyc10g076610.2 Solanum lycopersicum HOM05D001472 ORTHO05D002655 1.3e-06 57.4 48 52.1
Atru.chr8.2262 Acer truncatum HOM05D001472 ORTHO05D002655 1.7e-06 57.0 50 52.0
DCAR_013137 Daucus carota HOM05D001472 ORTHO05D002655 1.7e-06 57.0 48 58.3
SHI02889 Sapria himalayana HOM05D001472 ORTHO05D002655 1.7e-06 57.0 46 58.7
Ah.07g202260 Amaranthus hybridus HOM05D001472 ORTHO05D002655 3.0e-06 56.2 61 45.9
Peaxi162Scf00014g00219 Petunia axillaris HOM05D001472 ORTHO05D002655 3.0e-06 56.2 48 54.2
Sopen10g028250 Solanum pennellii HOM05D001472 ORTHO05D002655 3.0e-06 56.2 48 52.1
A10p29970 Brassica napus HOM05D001472 ORTHO05D002655 3.9e-06 55.8 48 56.2
BolC9t59783H Brassica oleracea HOM05D001472 ORTHO05D002655 3.9e-06 55.8 48 56.2
BraA10t45036Z Brassica rapa HOM05D001472 ORTHO05D002655 3.9e-06 55.8 48 56.2
Dinv19558 Davidia involucrata HOM05D001472 ORTHO05D002655 3.9e-06 55.8 63 49.2
PSO675G4629 Papaver somniferum HOM05D001472 ORTHO05D002655 3.9e-06 55.8 53 52.8
Potri.018G090600 Populus trichocarpa HOM05D001472 ORTHO05D002655 3.9e-06 55.8 48 56.2
RcHm_v2.0_Chr5g0011081 Rosa chinensis HOM05D001472 ORTHO05D002655 3.9e-06 55.8 58 50.0
C09p70380 Brassica napus HOM05D001472 ORTHO05D002655 5.1e-06 55.5 48 56.2
CDE10G1081 Ceratophyllum demersum HOM05D001472 ORTHO05D002655 5.1e-06 55.5 57 49.1
PRCOL_00000537 Prasinoderma coloniale HOM05D001472 ORTHO05D002655 5.1e-06 55.5 51 49.0
AagrBONN_evm.TU.Sc2ySwM_344.1321 Anthoceros agrestis HOM05D001472 ORTHO05D002655 6.6e-06 55.1 50 52.0
Aqoxy6G00349 Aquilegia oxysepala HOM05D001472 ORTHO05D002655 6.6e-06 55.1 68 42.6
Dinv19557 Davidia involucrata HOM05D001472 ORTHO05D002655 6.6e-06 55.1 49 55.1
Medtr2g036600 Medicago truncatula HOM05D001472 ORTHO05D002655 6.6e-06 55.1 48 56.2
PSO541G1999 Papaver somniferum HOM05D001472 ORTHO05D002655 6.6e-06 55.1 48 56.2
Thecc.05G014000 Theobroma cacao HOM05D001472 ORTHO05D002655 6.6e-06 55.1 48 54.2
CAN.G65.176 Capsicum annuum HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 54.2
Nitab4.5_0001111g0020 Nicotiana tabacum HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 54.2
Nitab4.5_0003132g0020 Nicotiana tabacum HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 54.2
Peaxi162Scf00375g00035 Petunia axillaris HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 54.2
QL06p041145 Quercus lobata HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 56.2
QL11p005215 Quercus lobata HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 56.2
Solyc06g073330.4 Solanum lycopersicum HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 54.2
Sopen06g029700 Solanum pennellii HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 54.2
PGSC0003DMG400026909 Solanum tuberosum HOM05D001472 ORTHO05D002655 8.7e-06 54.7 48 54.2


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