Gene: SGA_v2.0_scaffold6G03312
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold6G03312
- Transcript Identifier SGA_v2.0_scaffold6T03312
- Gene Type Coding gene
- Location scaffold6 : 1562246-1569384 : positive
Gene Family Information
- ID HOM05D001472
- #Genes/#Species 431/100
- Phylogenetic origin
- ID ORTHO05D007811
- #Genes/#Species 126/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Lysine--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006430 | IEA | InterPro | lysyl-tRNA aminoacylation | |
GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT3G13490 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000166 | IEA | InterPro | nucleotide binding | |
GO:0004824 | IEA | InterPro | lysine-tRNA ligase activity | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G13490 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | IEA | InterPro | cytoplasm | |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G13490 |
GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G13490 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR012340 | Nucleic acid-binding, OB-fold |
IPR044136 | Lysine-tRNA ligase, class II, N-terminal |
IPR018149 | Lysyl-tRNA synthetase, class II, C-terminal |
IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
IPR002313 | Lysine-tRNA ligase, class II |
IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
Mapman id | Description |
---|---|
17.2.13 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase |