Gene: HPP92_024255
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_024255
- Transcript Identifier Vpl13Ag24255.1
- Gene Type Coding gene
- Location CM028162.1 : 11107382-11174377 : negative
Gene Family Information
- ID HOM05D002427
- #Genes/#Species 279/100
- Phylogenetic origin
- ID ORTHO05D002818
- #Genes/#Species 260/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Vpl13Ag24255.1
- pid KAG0454963.1
Descriptions
- Description Elongation factor 4 ***
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006430 | IEA | InterPro | lysyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0004824 | IEA | InterPro | lysine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT5G08650 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G08650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G08650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013842 | GTP-binding protein LepA, C-terminal |
| IPR035647 | EF-G domain III/V-like |
| IPR044136 | Lysine-tRNA ligase, class II, N-terminal |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR006297 | Elongation factor 4 |
| IPR018149 | Lysyl-tRNA synthetase, class II, C-terminal |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| IPR000640 | Elongation factor EFG, domain V-like |
| IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
| IPR035654 | Elongation factor 4, domain IV |
| IPR005225 | Small GTP-binding protein domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR038363 | LepA, C-terminal domain superfamily |
| IPR004161 | Translation elongation factor EFTu-like, domain 2 |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR000795 | Translational (tr)-type GTP-binding domain |
| Mapman id | Description |
|---|---|
| 17.2.13 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase |