Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08428 Brassica carinata HOM05D006053 ORTHO05D008381 4.2e-188 661.4 379 100.0
Sp5g07130 Schrenkiella parvula HOM05D006053 ORTHO05D008381 7.6e-105 384.8 446 54.9
AT3G55340 Arabidopsis thaliana HOM05D006053 ORTHO05D008381 1.5e-97 360.5 428 54.2
BcaB01g00113 Brassica carinata HOM05D006053 ORTHO05D008381 1.9e-95 353.6 420 54.8
A09p48230 Brassica napus HOM05D006053 ORTHO05D008381 1.9e-95 353.6 468 51.1
C08p30500 Brassica napus HOM05D006053 ORTHO05D008381 1.9e-95 353.6 472 50.4
BolC8t50669H Brassica oleracea HOM05D006053 ORTHO05D008381 1.9e-95 353.6 472 50.4
BraA09t40276Z Brassica rapa HOM05D006053 ORTHO05D008381 1.9e-95 353.6 468 51.1
Carub.0005s2199 Capsella rubella HOM05D006053 ORTHO05D008381 7.2e-95 351.7 430 54.2
AL5G36480 Arabidopsis lyrata HOM05D006053 ORTHO05D008381 1.9e-87 327.0 434 50.9
Aa31LG10G10350 Aethionema arabicum HOM05D006053 ORTHO05D008381 7.4e-84 315.1 475 46.3
CARHR165350 Cardamine hirsuta HOM05D006053 ORTHO05D008381 2.6e-81 306.6 407 48.4
Thhalv10010257m.g Eutrema salsugineum HOM05D006053 ORTHO05D008381 5.7e-76 288.9 430 47.0
THA.LOC104824082 Tarenaya hassleriana HOM05D006053 ORTHO05D008381 1.3e-67 261.2 272 55.5
Cpa.g.sc1.353 Carica papaya HOM05D006053 ORTHO05D008381 1.0e-48 198.4 303 42.2
Cfa001523 Carpinus fangiana HOM05D006053 ORTHO05D008381 2.3e-48 197.2 359 39.8
Actinidia02973 Actinidia chinensis HOM05D006053 ORTHO05D008381 1.5e-47 194.5 284 44.0
MD01G1122100 Malus domestica HOM05D006053 ORTHO05D008381 1.2e-46 191.4 299 40.1
COL.COLO4_14945 Corchorus olitorius HOM05D006053 ORTHO05D008381 8.0e-46 188.7 348 39.4
Eucgr.G02908 Eucalyptus grandis HOM05D006053 ORTHO05D008381 1.1e-45 188.3 273 41.8
Dinv25975 Davidia involucrata HOM05D006053 ORTHO05D008381 1.8e-45 187.6 263 43.3
MD07G1191600 Malus domestica HOM05D006053 ORTHO05D008381 3.1e-45 186.8 326 38.3
Hund20006 Selenicereus undatus HOM05D006053 ORTHO05D008381 4.4e-44 183.0 260 43.8
Gorai.011G253900 Gossypium raimondii HOM05D006053 ORTHO05D008381 7.5e-44 182.2 414 36.0
Sabra10G0162000 Salix brachista HOM05D006053 ORTHO05D008381 9.8e-44 181.8 274 42.0
Sc20g0002520 Simmondsia chinensis HOM05D006053 ORTHO05D008381 1.3e-43 181.4 262 40.8
TAR623G1578 Trochodendron aralioides HOM05D006053 ORTHO05D008381 1.3e-43 181.4 412 35.7
Gohir.A10G214200 Gossypium hirsutum HOM05D006053 ORTHO05D008381 2.2e-43 180.6 415 35.7
RcHm_v2.0_Chr1g0365851 Rosa chinensis HOM05D006053 ORTHO05D008381 2.9e-43 180.3 292 38.4
GSVIVG01016604001 Vitis vinifera HOM05D006053 ORTHO05D008381 3.7e-43 179.9 413 34.1
CiPaw.02G181100 Carya illinoinensis HOM05D006053 ORTHO05D008381 4.9e-43 179.5 429 33.8
PGSC0003DMG400031213 Solanum tuberosum HOM05D006053 ORTHO05D008381 6.4e-43 179.1 351 36.2
Gohir.D10G223000 Gossypium hirsutum HOM05D006053 ORTHO05D008381 8.3e-43 178.7 414 34.8
Duzib114G0287 Durio zibethinus HOM05D006053 ORTHO05D008381 1.1e-42 178.3 415 36.4
Nn2g10473 Nelumbo nucifera HOM05D006053 ORTHO05D008381 1.1e-42 178.3 402 35.8
Nitab4.5_0000120g0180 Nicotiana tabacum HOM05D006053 ORTHO05D008381 1.1e-42 178.3 246 43.1
Sopen06g008460 Solanum pennellii HOM05D006053 ORTHO05D008381 1.4e-42 177.9 240 42.9
Lsat_1_v5_gn_9_66300 Lactuca sativa HOM05D006053 ORTHO05D008381 3.2e-42 176.8 272 40.8
Solyc06g018110.3 Solanum lycopersicum HOM05D006053 ORTHO05D008381 3.2e-42 176.8 243 42.4
Thecc.10G048700 Theobroma cacao HOM05D006053 ORTHO05D008381 3.2e-42 176.8 431 34.8
Cc02_g08350 Coffea canephora HOM05D006053 ORTHO05D008381 4.1e-42 176.4 268 41.8
Glyma.20G098800 Glycine max HOM05D006053 ORTHO05D008381 5.4e-42 176.0 261 42.1
HanXRQChr09g0247701 Helianthus annuus HOM05D006053 ORTHO05D008381 5.4e-42 176.0 289 38.4
ClCG07G003140 Citrullus lanatus HOM05D006053 ORTHO05D008381 7.0e-42 175.6 248 43.1
FAN06G2982 Fragaria x ananassa HOM05D006053 ORTHO05D008381 9.2e-42 175.3 319 38.9
Hma1.2p1_0192F.1_g083600 Hydrangea macrophylla HOM05D006053 ORTHO05D008381 9.2e-42 175.3 255 41.6
Nitab4.5_0001277g0050 Nicotiana tabacum HOM05D006053 ORTHO05D008381 9.2e-42 175.3 272 41.5
FvH4_7g21531 Fragaria vesca HOM05D006053 ORTHO05D008381 1.2e-41 174.9 319 38.9
Potri.010G209701 Populus trichocarpa HOM05D006053 ORTHO05D008381 1.6e-41 174.5 269 40.9
Glyma.10G290400 Glycine max HOM05D006053 ORTHO05D008381 2.1e-41 174.1 398 35.2
PGR142G2322 Punica granatum HOM05D006053 ORTHO05D008381 3.5e-41 173.3 292 37.3
FAN01G1874 Fragaria x ananassa HOM05D006053 ORTHO05D008381 4.6e-41 172.9 308 39.0
Prupe.2G229600 Prunus persica HOM05D006053 ORTHO05D008381 4.6e-41 172.9 342 35.4
FAN06G4406 Fragaria x ananassa HOM05D006053 ORTHO05D008381 6.0e-41 172.6 312 38.8
QL08p058728 Quercus lobata HOM05D006053 ORTHO05D008381 6.0e-41 172.6 277 40.4
FAN10G2741 Fragaria x ananassa HOM05D006053 ORTHO05D008381 7.8e-41 172.2 307 37.8
Atru.chr12.522 Acer truncatum HOM05D006053 ORTHO05D008381 1.3e-40 171.4 274 41.2
CsaV3_5G006870 Cucumis sativus L. HOM05D006053 ORTHO05D008381 3.0e-40 170.2 250 40.8
DCAR_015208 Daucus carota HOM05D006053 ORTHO05D008381 3.9e-40 169.9 258 43.0
Phvul.007G011000 Phaseolus vulgaris HOM05D006053 ORTHO05D008381 3.9e-40 169.9 288 39.6
arahy.Tifrunner.gnm1.ann1.JRYV00 Arachis hypogaea HOM05D006053 ORTHO05D008381 5.1e-40 169.5 272 39.3
arahy.Tifrunner.gnm1.ann1.AZ4556 Arachis hypogaea HOM05D006053 ORTHO05D008381 6.6e-40 169.1 270 40.4
Manes.10G035900 Manihot esculenta HOM05D006053 ORTHO05D008381 6.6e-40 169.1 287 37.6
PSO339G3195 Papaver somniferum HOM05D006053 ORTHO05D008381 1.5e-39 167.9 293 36.9
MBI05_g35605_MAGBIO Magnolia biondii HOM05D006053 ORTHO05D008381 1.9e-39 167.5 235 43.0
MELO3C023836.2 Cucumis melo HOM05D006053 ORTHO05D008381 7.3e-39 165.6 267 39.7
TWI63G0066 Tripterygium wilfordii HOM05D006053 ORTHO05D008381 7.3e-39 165.6 308 37.7
VMungo0720G3082 Vigna mungo HOM05D006053 ORTHO05D008381 9.5e-39 165.2 279 38.0
unitig_699.g19587 Utricularia gibba HOM05D006053 ORTHO05D008381 1.2e-38 164.9 333 34.8
CSS0026153 Camellia sinensis var. sinensis HOM05D006053 ORTHO05D008381 3.6e-38 163.3 329 35.3
Ciclev10031409m.g Citrus clementina HOM05D006053 ORTHO05D008381 4.7e-38 162.9 306 35.9
Lj5g0015550 Lotus japonicus HOM05D006053 ORTHO05D008381 4.7e-38 162.9 248 41.9
Prupe.2G229700 Prunus persica HOM05D006053 ORTHO05D008381 4.7e-38 162.9 273 38.5
Sed0000212 Sechium edule HOM05D006053 ORTHO05D008381 4.7e-38 162.9 276 39.1
PSO384G4800 Papaver somniferum HOM05D006053 ORTHO05D008381 6.2e-38 162.5 295 38.3
Ah.16g107460 Amaranthus hybridus HOM05D006053 ORTHO05D008381 8.1e-38 162.2 415 33.7
ECA232G2518 Erigeron canadensis HOM05D006053 ORTHO05D008381 8.1e-38 162.2 266 36.8
AUR62038385 Chenopodium quinoa HOM05D006053 ORTHO05D008381 1.4e-37 161.4 304 35.2
Migut.L00294 Erythranthe guttata HOM05D006053 ORTHO05D008381 5.2e-37 159.5 300 34.0
SEGI_38671 Sequoiadendron giganteum HOM05D006053 ORTHO05D008381 6.8e-37 159.1 262 39.3
ATR0113G011 Amborella trichopoda HOM05D006053 ORTHO05D008381 8.9e-37 158.7 244 38.9
MSTRG.23542 Avicennia marina HOM05D006053 ORTHO05D008381 8.9e-37 158.7 283 36.4
AUR62022513 Chenopodium quinoa HOM05D006053 ORTHO05D008381 8.9e-37 158.7 332 33.4
AUR62038388 Chenopodium quinoa HOM05D006053 ORTHO05D008381 8.9e-37 158.7 283 35.3
EL10As19g24197 Beta vulgaris HOM05D006053 ORTHO05D008381 1.5e-36 157.9 275 37.1
Zm00001eb266400 Zea mays HOM05D006053 ORTHO05D008381 1.5e-36 157.9 215 42.3
Peaxi162Scf00408g00034 Petunia axillaris HOM05D006053 ORTHO05D008381 4.4e-36 156.4 320 34.1
Lj8C88T8 Lonicera japonica HOM05D006053 ORTHO05D008381 7.5e-36 155.6 322 36.3
Rhsim03G0127000 Rhododendron simsii HOM05D006053 ORTHO05D008381 2.9e-35 153.7 269 36.1
Lalb_Chr06g0164221 Lupinus albus HOM05D006053 ORTHO05D008381 3.7e-35 153.3 161 50.3
SHI22531 Sapria himalayana HOM05D006053 ORTHO05D008381 4.9e-35 152.9 234 38.0
Psat6g236560 Pisum sativum HOM05D006053 ORTHO05D008381 6.4e-35 152.5 270 37.4
Haze_17018 Corylus avellana HOM05D006053 ORTHO05D008381 2.4e-34 150.6 159 50.3
RhsimUnG0003300 Rhododendron simsii HOM05D006053 ORTHO05D008381 5.4e-34 149.4 248 37.1
Aqoxy2G02006 Aquilegia oxysepala HOM05D006053 ORTHO05D008381 9.2e-34 148.7 212 42.9
HPP92_006599 Vanilla planifolia HOM05D006053 ORTHO05D008381 3.5e-33 146.7 287 34.1
TPR.G14004 Trifolium pratense HOM05D006053 ORTHO05D008381 8.6e-32 142.1 193 41.5
Medtr1g115375 Medicago truncatula HOM05D006053 ORTHO05D008381 7.3e-31 139.0 293 33.8
SGA_v2.0_scaffold115G32148 Striga asiatica HOM05D006053 ORTHO05D008381 1.8e-29 134.4 380 29.5
Oeu056126.3 Olea europaea HOM05D006053 ORTHO05D008381 2.4e-29 134.0 358 31.6
Pp3c14_1940 Physcomitrium patens HOM05D006053 ORTHO05D008381 4.4e-28 129.8 275 32.7
FAN03G0601 Fragaria x ananassa HOM05D006053 ORTHO05D008381 1.7e-27 127.9 199 40.7
Mapoly0121s0015 Marchantia polymorpha HOM05D006053 ORTHO05D008381 3.2e-26 123.6 286 33.2
CDE09G1153 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 1.3e-24 118.2 172 41.3
FAN03G0613 Fragaria x ananassa HOM05D006053 ORTHO05D008381 3.9e-24 116.7 160 43.1
AagrBONN_evm.TU.Sc2ySwM_368.1156 Anthoceros agrestis HOM05D006053 ORTHO05D008381 5.1e-24 116.3 163 39.9
CDE04G3245 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 5.3e-21 106.3 158 38.6
SMO118G0265 Selaginella moellendorffii HOM05D006053 ORTHO05D008381 4.9e-19 99.8 156 37.2
MCO04G213 Micromonas commoda HOM05D006053 ORTHO05D008381 7.3e-15 85.9 207 29.0
CDE02G2651 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 8.1e-14 82.4 108 43.5
BcaC02g09748 Brassica carinata HOM05D006053 ORTHO05D023845 5.3e-13 79.7 98 45.9
C04p37170 Brassica napus HOM05D006053 ORTHO05D041902 2.4e-10 70.9 50 76.0
Os05g0114500 Oryza sativa ssp. japonica HOM05D006053 ORTHO05D008381 3.5e-09 67.0 108 40.7
AL2G33170 Arabidopsis lyrata HOM05D006628 ORTHO05D000088 3.9e-08 63.5 35 80.0
Sabra08G0036400 Salix brachista HOM05D006053 ORTHO05D008381 3.9e-08 63.5 108 38.9
vmacro07150 Vaccinium macrocarpon HOM05D006053 ORTHO05D008381 4.3e-07 60.1 59 50.8
C04p37180 Brassica napus HOM05D006053 ORTHO05D023845 1.3e-06 58.5 59 54.2
BolC4t25272H Brassica oleracea HOM05D006053 ORTHO05D023845 2.8e-06 57.4 37 70.3
Hma1.2p1_0192F.1_g083610 Hydrangea macrophylla HOM05D006053 ORTHO05D008381 4.8e-06 56.6 79 41.8


User provided reference genes

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