Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 0.0e+00 1277.3 631 100.0
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 0.0e+00 1126.7 641 89.1
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 0.0e+00 1123.6 641 88.8
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 0.0e+00 1115.9 641 87.8
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 0.0e+00 1115.9 641 87.8
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 0.0e+00 1115.9 641 87.8
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 0.0e+00 1094.0 660 84.7
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.2e-306 1055.0 662 81.9
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 1.2e-291 1006.1 661 78.2
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.9e-289 998.8 660 77.9
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 1.3e-282 976.1 661 76.7
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 2.7e-272 941.8 660 74.1
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 1.2e-267 926.4 670 73.4
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 7.9e-240 833.9 668 65.1
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 4.1e-220 768.5 631 66.9
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 7.7e-219 764.2 635 65.2
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 2.8e-208 729.2 675 59.1
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 3.6e-208 728.8 667 57.7
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 2.8e-205 719.2 680 56.8
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 6.3e-205 718.0 683 57.2
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 4.1e-204 715.3 678 56.3
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 5.4e-204 714.9 677 56.6
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 1.2e-203 713.8 669 57.5
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 3.5e-203 712.2 673 56.8
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 7.3e-201 704.5 661 56.4
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 1.0e-199 700.7 673 56.3
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.8e-199 699.9 666 57.2
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 5.2e-199 698.4 701 54.1
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 1.2e-198 697.2 666 56.5
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 1.5e-198 696.8 661 55.5
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 2.6e-198 696.0 658 55.0
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 3.7e-197 692.2 674 55.6
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 5.4e-196 688.3 660 55.9
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 1.2e-195 687.2 672 55.8
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 6.0e-195 684.9 658 54.6
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 2.5e-193 679.5 698 53.2
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 3.3e-193 679.1 675 54.5
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 4.3e-193 678.7 685 54.9
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 4.3e-193 678.7 672 56.2
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 2.1e-192 676.4 663 54.8
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 2.8e-192 676.0 693 53.5
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 1.1e-191 674.1 663 54.9
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 1.1e-191 674.1 675 53.9
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 5.2e-191 671.8 661 56.0
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 6.8e-191 671.4 712 52.9
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 1.5e-190 670.2 694 52.6
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 3.4e-190 669.1 678 55.2
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 4.4e-190 668.7 669 54.1
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 7.5e-190 667.9 668 53.0
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 3.7e-189 665.6 665 54.4
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 4.1e-188 662.1 669 54.6
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.6e-187 660.2 669 54.4
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 5.1e-186 655.2 690 51.6
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.1e-185 654.1 690 53.0
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 4.7e-184 648.7 661 55.1
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.8e-183 646.7 674 52.5
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 8.9e-183 644.4 656 53.0
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 1.2e-182 644.0 651 54.5
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 4.9e-181 638.6 725 49.8
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 6.4e-181 638.3 669 52.9
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 5.4e-180 635.2 655 53.6
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 2.7e-179 632.9 738 49.2
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 1.3e-178 630.6 596 58.2
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 6.8e-175 618.2 659 51.9
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.5e-174 617.1 664 50.8
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 1.5e-174 617.1 626 52.6
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 1.3e-170 604.0 843 44.0
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 3.9e-170 602.4 692 49.6
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.9e-169 600.1 659 49.8
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 9.6e-169 597.8 607 55.2
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 1.1e-167 594.3 592 55.6
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.3e-162 577.4 618 55.8
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.3e-162 577.4 565 55.8
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 8.7e-162 574.7 640 50.8
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 5.6e-161 572.0 611 51.9
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 4.0e-159 565.8 663 47.8
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 4.3e-153 545.8 641 48.7
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 8.1e-152 541.6 637 46.9
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 4.0e-151 539.3 666 48.2
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.2e-150 537.7 550 54.4
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 7.6e-150 535.0 642 47.8
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.9e-148 530.4 642 47.7
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.6e-147 527.3 632 46.7
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 7.9e-147 525.0 631 48.0
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 3.0e-146 523.1 608 49.8
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 5.1e-146 522.3 622 48.4
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 3.7e-144 516.2 633 47.1
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 2.6e-142 510.0 676 45.4
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 2.5e-137 493.4 542 53.5
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 1.4e-135 487.6 527 51.2
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 7.4e-129 465.3 490 50.4
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.2e-123 448.0 669 40.5
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 5.1e-122 442.6 557 48.7
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 6.7e-122 442.2 498 49.6
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 8.2e-120 435.3 519 48.2
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 4.5e-118 429.5 650 39.1
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.2e-115 421.4 642 40.2
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 1.7e-109 401.0 543 43.6
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 2.2e-109 400.6 637 38.6
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 9.4e-100 368.6 451 47.7
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 4.0e-98 363.2 760 34.5
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 8.0e-91 339.0 493 43.8
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 8.6e-85 318.9 224 68.8
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.6e-83 314.7 450 41.6
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 4.0e-82 310.1 224 69.2
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 6.4e-80 302.8 560 36.1
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 7.0e-79 299.3 915 27.8
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 1.5e-76 291.6 315 52.1
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.8e-67 260.8 226 59.3
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 3.2e-63 247.3 233 54.5
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.6e-59 235.0 170 70.0
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 9.9e-57 225.7 183 63.9
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 4.9e-56 223.4 167 66.5
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 4.9e-56 223.4 181 66.3
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 1.9e-55 221.5 164 67.7
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 1.2e-54 218.8 349 39.3
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.9e-48 197.6 135 71.9
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 3.8e-48 197.2 312 41.3
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 9.3e-47 192.6 166 60.8
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.1e-46 191.4 147 66.7
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 9.6e-44 182.6 174 51.7
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.4e-39 167.9 149 56.4
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 2.4e-39 167.9 175 52.0
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 9.3e-39 166.0 143 58.7
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.1e-38 164.9 171 54.4
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 3.5e-38 164.1 642 26.6
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 1.0e-37 162.5 199 46.7
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 9.0e-34 149.4 101 70.3
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 4.9e-32 143.7 304 33.2
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.3e-29 134.8 147 50.3
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 4.8e-27 127.1 123 46.3
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 4.1e-26 124.0 168 46.4
Sp5g22380 Schrenkiella parvula HOM05D004944 ORTHO05D005989 7.6e-25 119.8 88 64.8
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 4.6e-22 110.5 255 31.4
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.8e-21 108.6 90 64.4
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 1.8e-21 108.6 144 45.1
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 8.7e-21 106.3 90 53.3
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 2.8e-19 101.3 246 32.9
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 4.1e-18 97.4 151 41.1
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 6.9e-18 96.7 54 83.3
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 9.0e-18 96.3 52 84.6
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 1.5e-17 95.5 173 34.1
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 1.1e-15 89.4 68 60.3
SHI03974 Sapria himalayana HOM05D004944 ORTHO05D005989 1.5e-12 79.0 149 32.9
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 2.4e-10 71.6 64 46.9
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 5.3e-10 70.5 62 51.6


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