Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.2418 Acer truncatum HOM05D000822 ORTHO05D023199 3.4e-68 261.5 131 100.0
Cfa013155 Carpinus fangiana HOM05D000822 ORTHO05D004949 8.4e-51 203.8 125 76.0
Haze_21526 Corylus avellana HOM05D000822 ORTHO05D004949 3.5e-49 198.4 125 74.4
Dinv30147 Davidia involucrata HOM05D000822 ORTHO05D004949 1.0e-48 196.8 125 74.4
Manes.16G121400 Manihot esculenta HOM05D000822 ORTHO05D004949 7.3e-47 190.7 125 72.8
Potri.018G028100 Populus trichocarpa HOM05D000822 ORTHO05D004949 2.8e-46 188.7 125 74.4
CSS0023602 Camellia sinensis var. sinensis HOM05D000822 ORTHO05D004949 1.1e-45 186.8 125 72.0
Gorai.009G057700 Gossypium raimondii HOM05D000822 ORTHO05D004949 1.4e-45 186.4 125 69.6
Potri.006G253500 Populus trichocarpa HOM05D000822 ORTHO05D004949 1.8e-45 186.0 125 72.0
RcHm_v2.0_Chr4g0412141 Rosa chinensis HOM05D000822 ORTHO05D004949 1.8e-45 186.0 125 69.6
Sabra18G0030300 Salix brachista HOM05D000822 ORTHO05D004949 1.8e-45 186.0 125 73.6
FAN20G0430 Fragaria x ananassa HOM05D000822 ORTHO05D004949 4.0e-45 184.9 125 70.4
CANSAT21G1716 Cannabis sativa HOM05D000822 ORTHO05D004949 5.2e-45 184.5 125 69.6
QL02p021874 Quercus lobata HOM05D000822 ORTHO05D004949 5.2e-45 184.5 131 69.5
Thecc.09G026000 Theobroma cacao HOM05D000822 ORTHO05D004949 5.2e-45 184.5 125 69.6
CiPaw.07G222400 Carya illinoinensis HOM05D000822 ORTHO05D004949 8.9e-45 183.7 125 68.8
FvH4_2g29170 Fragaria vesca HOM05D000822 ORTHO05D004949 8.9e-45 183.7 125 70.4
FAN24G1467 Fragaria x ananassa HOM05D000822 ORTHO05D004949 8.9e-45 183.7 125 70.4
Gohir.D05G056700 Gossypium hirsutum HOM05D000822 ORTHO05D004949 1.2e-44 183.3 125 68.8
FAN15G3685 Fragaria x ananassa HOM05D000822 ORTHO05D004949 1.5e-44 183.0 125 69.6
Duzib168G0655 Durio zibethinus HOM05D000822 ORTHO05D004949 4.4e-44 181.4 125 68.8
THA.LOC104807524 Tarenaya hassleriana HOM05D000822 ORTHO05D004949 5.8e-44 181.0 126 70.6
Actinidia22350 Actinidia chinensis HOM05D000822 ORTHO05D004949 7.6e-44 180.6 125 67.2
COL.COLO4_18849 Corchorus olitorius HOM05D000822 ORTHO05D004949 9.9e-44 180.3 125 67.2
TWI34G0044 Tripterygium wilfordii HOM05D000822 ORTHO05D004949 9.9e-44 180.3 125 68.8
GSVIVG01035851001 Vitis vinifera HOM05D000822 ORTHO05D004949 9.9e-44 180.3 126 70.6
Sabra06G0198000 Salix brachista HOM05D000822 ORTHO05D004949 1.3e-43 179.9 125 70.4
THA.LOC104807527 Tarenaya hassleriana HOM05D000822 ORTHO05D004949 1.7e-43 179.5 126 69.0
Actinidia25857 Actinidia chinensis HOM05D000822 ORTHO05D004949 3.8e-43 178.3 125 64.8
Lj7A721T54 Lonicera japonica HOM05D000822 ORTHO05D004949 4.9e-43 177.9 125 67.2
Prupe.1G480300 Prunus persica HOM05D000822 ORTHO05D004949 1.1e-42 176.8 126 67.5
CSS0022636 Camellia sinensis var. sinensis HOM05D000822 ORTHO05D004949 1.4e-42 176.4 124 65.3
MD15G1124800 Malus domestica HOM05D000822 ORTHO05D004949 1.9e-42 176.0 125 67.2
PGR044G1864 Punica granatum HOM05D000822 ORTHO05D004949 1.9e-42 176.0 127 68.5
Eucgr.C02780 Eucalyptus grandis HOM05D000822 ORTHO05D004949 2.4e-42 175.6 126 66.7
Lj1g0024027 Lotus japonicus HOM05D000822 ORTHO05D004949 3.2e-42 175.3 132 66.7
TAR383G0596 Trochodendron aralioides HOM05D000822 ORTHO05D004949 3.2e-42 175.3 125 67.2
vmacro11160 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 3.2e-42 175.3 126 64.3
AT3G49500 Arabidopsis thaliana HOM05D000822 ORTHO05D004949 5.4e-42 174.5 125 66.4
Hma1.2p1_0000F.1_g000140 Hydrangea macrophylla HOM05D000822 ORTHO05D004949 5.4e-42 174.5 125 65.6
TWI18G0740 Tripterygium wilfordii HOM05D000822 ORTHO05D004949 5.4e-42 174.5 126 66.7
Gohir.A05G054300 Gossypium hirsutum HOM05D000822 ORTHO05D004949 7.1e-42 174.1 125 65.6
Cpa.g.sc117.8 Carica papaya HOM05D000822 ORTHO05D004949 9.3e-42 173.7 125 67.2
vmacro14477 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 1.6e-41 172.9 126 64.3
Nitab4.5_0000209g0100 Nicotiana tabacum HOM05D000822 ORTHO05D004949 2.1e-41 172.6 125 63.2
ClCG08G013320 Citrullus lanatus HOM05D000822 ORTHO05D004949 2.7e-41 172.2 125 64.0
Sc23g0006810 Simmondsia chinensis HOM05D000822 ORTHO05D004949 2.7e-41 172.2 127 63.0
Sc23g0006820 Simmondsia chinensis HOM05D000822 ORTHO05D004949 2.7e-41 172.2 127 63.0
Eucgr.C02782 Eucalyptus grandis HOM05D000822 ORTHO05D004949 3.5e-41 171.8 126 68.3
CSS0029415 Camellia sinensis var. sinensis HOM05D000822 ORTHO05D004949 4.6e-41 171.4 124 65.3
Nitab4.5_0005011g0040 Nicotiana tabacum HOM05D000822 ORTHO05D004949 4.6e-41 171.4 125 63.2
CAN.G1263.25 Capsicum annuum HOM05D000822 ORTHO05D004949 1.0e-40 170.2 125 62.4
Ca_15730_v3 Cicer arietinum L. HOM05D000822 ORTHO05D004949 1.0e-40 170.2 132 65.2
Cc08_g00760 Coffea canephora HOM05D000822 ORTHO05D004949 1.0e-40 170.2 125 60.8
Peaxi162Scf00073g01420 Petunia axillaris HOM05D000822 ORTHO05D004949 3.0e-40 168.7 125 62.4
CsaV3_2G032040 Cucumis sativus L. HOM05D000822 ORTHO05D004949 3.9e-40 168.3 125 64.0
Nn2g12036 Nelumbo nucifera HOM05D000822 ORTHO05D004949 3.9e-40 168.3 125 64.0
Rhsim02G0199900 Rhododendron simsii HOM05D000822 ORTHO05D004949 3.9e-40 168.3 126 61.1
Carub.0005s1583 Capsella rubella HOM05D000822 ORTHO05D004949 5.1e-40 167.9 126 65.1
Lsat_1_v5_gn_1_44761 Lactuca sativa HOM05D000822 ORTHO05D004949 8.7e-40 167.2 125 60.0
SalBow4G2024 Salvia bowleyana HOM05D000822 ORTHO05D004949 8.7e-40 167.2 125 64.0
Glyma.06G068900 Glycine max HOM05D000822 ORTHO05D004949 1.1e-39 166.8 134 65.7
Psat0s2233g0200 Pisum sativum HOM05D000822 ORTHO05D004949 1.5e-39 166.4 132 63.6
VMungo1309G0438 Vigna mungo HOM05D000822 ORTHO05D004949 1.5e-39 166.4 134 64.9
arahy.Tifrunner.gnm1.ann1.CJD9B0 Arachis hypogaea HOM05D000822 ORTHO05D004949 1.9e-39 166.0 134 64.2
Sopen04g007000 Solanum pennellii HOM05D000822 ORTHO05D004949 1.9e-39 166.0 125 60.8
arahy.Tifrunner.gnm1.ann1.W9XA7T Arachis hypogaea HOM05D000822 ORTHO05D004949 2.5e-39 165.6 134 64.2
Migut.A00048 Erythranthe guttata HOM05D000822 ORTHO05D004949 2.5e-39 165.6 126 63.5
Glyma.04G067300 Glycine max HOM05D000822 ORTHO05D004949 2.5e-39 165.6 134 65.7
CARHR158500 Cardamine hirsuta HOM05D000822 ORTHO05D004949 3.3e-39 165.2 127 65.4
ECA233G2786 Erigeron canadensis HOM05D000822 ORTHO05D004949 3.3e-39 165.2 125 60.8
TAR645G0002 Trochodendron aralioides HOM05D000822 ORTHO05D004949 3.3e-39 165.2 125 62.4
PGSC0003DMG400023601 Solanum tuberosum HOM05D000822 ORTHO05D004949 4.3e-39 164.9 125 60.0
vmacro11165 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 4.3e-39 164.9 126 60.3
AL5G29290 Arabidopsis lyrata HOM05D000822 ORTHO05D004949 5.6e-39 164.5 126 64.3
Medtr3g107390 Medicago truncatula HOM05D000822 ORTHO05D004949 5.6e-39 164.5 132 64.4
Lalb_Chr23g0268561 Lupinus albus HOM05D000822 ORTHO05D004949 7.3e-39 164.1 133 65.4
Rhsim03G0035600 Rhododendron simsii HOM05D000822 ORTHO05D004949 7.3e-39 164.1 126 59.5
Solyc04g014870.3 Solanum lycopersicum HOM05D000822 ORTHO05D004949 9.6e-39 163.7 125 60.0
Aa31LG4G18010 Aethionema arabicum HOM05D000822 ORTHO05D004949 1.3e-38 163.3 125 60.8
TPR.G3138 Trifolium pratense HOM05D000822 ORTHO05D004949 1.6e-38 162.9 132 59.8
MSTRG.11622 Avicennia marina HOM05D000822 ORTHO05D004949 4.8e-38 161.4 125 61.6
Phvul.009G093700 Phaseolus vulgaris HOM05D000822 ORTHO05D004949 4.8e-38 161.4 134 64.2
SGA_v2.0_scaffold64G21918 Striga asiatica HOM05D000822 ORTHO05D004949 4.8e-38 161.4 126 60.3
ECA248G3419 Erigeron canadensis HOM05D000822 ORTHO05D004949 6.2e-38 161.0 125 60.0
FAN20G1728 Fragaria x ananassa HOM05D000822 ORTHO05D004949 6.2e-38 161.0 125 61.6
Lj8A695T68 Lonicera japonica HOM05D000822 ORTHO05D004949 6.2e-38 161.0 128 61.7
BcaB05g23125 Brassica carinata HOM05D000822 ORTHO05D004949 1.1e-37 160.2 127 61.4
Sp5g12590 Schrenkiella parvula HOM05D000822 ORTHO05D004949 1.8e-37 159.5 127 61.4
HanXRQChr06g0181231 Helianthus annuus HOM05D000822 ORTHO05D004949 2.4e-37 159.1 125 58.4
FvH4_2g29160 Fragaria vesca HOM05D000822 ORTHO05D004949 5.3e-37 157.9 125 61.6
FAN24G0815 Fragaria x ananassa HOM05D000822 ORTHO05D004949 5.3e-37 157.9 125 61.6
MELO3C011257.2 Cucumis melo HOM05D000315 ORTHO05D004949 6.9e-37 157.5 117 65.0
Lj8A715T56 Lonicera japonica HOM05D000822 ORTHO05D004949 6.9e-37 157.5 128 60.9
A01p24710 Brassica napus HOM05D000822 ORTHO05D004949 1.5e-36 156.4 127 60.6
C01p30830 Brassica napus HOM05D000822 ORTHO05D004949 1.5e-36 156.4 127 60.6
BolC1t03015H Brassica oleracea HOM05D000822 ORTHO05D004949 1.5e-36 156.4 127 60.6
BraA01t02383Z Brassica rapa HOM05D000822 ORTHO05D004949 1.5e-36 156.4 127 60.6
AUR62031504 Chenopodium quinoa HOM05D000822 ORTHO05D004949 2.0e-36 156.0 132 61.4
RcHm_v2.0_Chr6g0298021 Rosa chinensis HOM05D000822 ORTHO05D004949 2.0e-36 156.0 125 62.4
Lj8C714T3 Lonicera japonica HOM05D000822 ORTHO05D023199 2.6e-36 155.6 128 60.2
BcaC02g09911 Brassica carinata HOM05D000822 ORTHO05D004949 3.4e-36 155.2 127 59.8
C04p35290 Brassica napus HOM05D000822 ORTHO05D004949 3.4e-36 155.2 127 59.8
BolC4t25082H Brassica oleracea HOM05D000822 ORTHO05D004949 3.4e-36 155.2 127 59.8
HanXRQChr03g0088731 Helianthus annuus HOM05D000822 ORTHO05D004949 5.8e-36 154.5 126 57.9
AUR62012402 Chenopodium quinoa HOM05D000822 ORTHO05D004949 7.6e-36 154.1 132 59.8
Lj8P711T9 Lonicera japonica HOM05D000822 ORTHO05D023199 1.7e-35 152.9 130 60.0
Hund04534 Selenicereus undatus HOM05D000822 ORTHO05D004949 2.9e-35 152.1 129 58.1
Sopen08g024460 Solanum pennellii HOM05D000822 ORTHO05D004949 6.4e-35 151.0 127 58.3
Ah.16g104370 Amaranthus hybridus HOM05D000822 ORTHO05D004949 1.1e-34 150.2 130 56.2
FAN27G1605 Fragaria x ananassa HOM05D000822 ORTHO05D004949 1.1e-34 150.2 101 72.3
DCAR_003090 Daucus carota HOM05D000822 ORTHO05D004949 1.9e-34 149.4 128 57.0
DCAR_031550 Daucus carota HOM05D000822 ORTHO05D004949 2.4e-34 149.1 111 64.0
Solyc08g075820.4 Solanum lycopersicum HOM05D000822 ORTHO05D004949 7.1e-34 147.5 127 55.9
PGSC0003DMG400030859 Solanum tuberosum HOM05D000822 ORTHO05D004949 1.6e-33 146.4 108 65.7
EL10Ac2g04235 Beta vulgaris HOM05D000822 ORTHO05D004949 2.1e-33 146.0 130 57.7
PSO455G0184 Papaver somniferum HOM05D000822 ORTHO05D004949 4.6e-33 144.8 125 52.0
Oeu057301.1 Olea europaea HOM05D000822 ORTHO05D004949 1.3e-32 143.3 102 68.6
CDE04G0917 Ceratophyllum demersum HOM05D000822 ORTHO05D004949 1.5e-31 139.8 125 52.8
Os01g0527600 Oryza sativa ssp. japonica HOM05D000822 ORTHO05D004949 1.3e-30 136.7 123 54.5
Aqoxy7G02226 Aquilegia oxysepala HOM05D000822 ORTHO05D023199 2.1e-30 136.0 130 52.3
MBI01_g15673_MAGBIO Magnolia biondii HOM05D000822 ORTHO05D004949 4.8e-30 134.8 128 52.3
Aqoxy7G03700 Aquilegia oxysepala HOM05D000822 ORTHO05D004949 6.2e-30 134.4 124 58.1
FAN27G0118 Fragaria x ananassa HOM05D000822 ORTHO05D004949 5.3e-29 131.3 104 61.5
MBI01_g15672_MAGBIO Magnolia biondii HOM05D000822 ORTHO05D004949 1.3e-27 126.7 108 61.1
ATR1120G112 Amborella trichopoda HOM05D000822 ORTHO05D004949 2.9e-27 125.6 125 55.2
ATR1120G049 Amborella trichopoda HOM05D000822 ORTHO05D004949 6.4e-27 124.4 125 56.0
Dinv18248 Davidia involucrata HOM05D000822 ORTHO05D004949 3.2e-26 122.1 87 66.7
HPP92_007972 Vanilla planifolia HOM05D000822 ORTHO05D004949 1.6e-25 119.8 101 57.4
unitig_4.g30346 Utricularia gibba HOM05D000822 ORTHO05D004949 4.3e-23 111.7 116 50.0
Eucgr.C02779 Eucalyptus grandis HOM05D000822 ORTHO05D004949 1.6e-22 109.8 130 50.0
SEGI_34001 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 1.5e-20 103.2 102 52.9
SEGI_34012 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 1.5e-20 103.2 102 52.9
SEGI_40615 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 8.4e-19 97.4 102 52.9
HanXRQChr01g0030821 Helianthus annuus HOM05D000822 ORTHO05D004949 1.1e-18 97.1 70 58.6
BcaC09g49953 Brassica carinata HOM05D000822 ORTHO05D023199 1.4e-18 96.7 79 59.5
Zm00001eb389110 Zea mays HOM05D000822 ORTHO05D004949 5.1e-16 88.2 91 50.5
SEGI_33211 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 5.7e-15 84.7 102 47.1
vmacro23460 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 2.9e-11 72.4 53 64.2
AagrBONN_evm.TU.Sc2ySwM_368.304 Anthoceros agrestis HOM05D000822 ORTHO05D004949 7.2e-10 67.8 60 53.3
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 9.3e-10 67.4 47 68.1
Mapoly0151s0009 Marchantia polymorpha HOM05D000822 ORTHO05D004949 1.3e-08 63.5 113 38.1
CBR_g971 Chara braunii HOM05D000822 ORTHO05D004949 1.6e-06 56.6 130 35.4
CBR_g18922 Chara braunii HOM05D000822 ORTHO05D000048 2.8e-06 55.8 112 32.1
Pp3c19_17100 Physcomitrium patens HOM05D000822 ORTHO05D004949 2.8e-06 55.8 94 36.2
CBR_g45545 Chara braunii HOM05D000822 ORTHO05D002021 3.7e-06 55.5 140 30.0


User provided reference genes

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