Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 1.6e-256 889.0 497 100.0
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 6.3e-123 445.3 406 67.5
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 9.0e-122 441.4 378 70.9
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 5.9e-121 438.7 378 72.2
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 5.3e-114 415.6 431 62.9
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 9.1e-114 414.8 377 68.7
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 1.5e-113 414.1 377 69.8
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 3.4e-113 412.9 379 68.3
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 8.5e-112 408.3 377 68.7
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 1.9e-111 407.1 378 68.5
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 1.6e-110 404.1 378 68.8
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 3.0e-109 399.8 378 67.5
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 3.9e-109 399.4 377 66.8
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 7.4e-108 395.2 329 73.3
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 1.4e-106 391.0 378 68.3
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 2.4e-106 390.2 388 63.7
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 6.9e-106 388.7 382 64.4
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 9.1e-106 388.3 442 58.8
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 1.3e-104 384.4 377 65.3
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 6.5e-104 382.1 376 65.2
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.0e-101 374.8 378 63.5
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 1.8e-101 374.0 337 69.1
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 2.6e-100 370.2 377 63.1
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 3.3e-100 369.8 378 64.6
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 7.4e-100 368.6 376 65.4
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 1.3e-99 367.9 395 61.8
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 2.2e-99 367.1 377 64.5
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 2.2e-99 367.1 384 62.5
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 4.8e-99 365.9 377 64.5
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 1.1e-98 364.8 377 63.4
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 2.4e-98 363.6 353 68.6
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 7.0e-98 362.1 374 62.8
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 5.9e-97 359.0 377 64.2
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 5.9e-97 359.0 386 63.0
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 1.3e-96 357.8 377 63.1
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 1.7e-96 357.5 355 64.5
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 2.2e-96 357.1 375 60.8
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 2.2e-96 357.1 450 56.9
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 1.5e-95 354.4 328 66.5
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 3.2e-95 353.2 388 57.2
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 3.2e-95 353.2 378 59.3
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 3.2e-95 353.2 409 56.2
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 3.2e-95 353.2 376 63.6
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 2.7e-94 350.1 487 53.4
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 2.7e-94 350.1 380 62.1
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 8.0e-94 348.6 398 59.5
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 1.8e-93 347.4 347 63.4
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.5e-92 344.4 378 61.6
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 1.5e-92 344.4 381 62.2
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 2.6e-92 343.6 376 62.5
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 9.7e-92 341.7 377 61.3
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 2.8e-91 340.1 379 59.9
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 2.8e-91 340.1 328 65.2
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 2.4e-90 337.0 377 57.8
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 3.1e-90 336.7 382 61.0
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 4.1e-90 336.3 383 60.1
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 5.3e-90 335.9 391 59.8
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 4.5e-89 332.8 391 59.6
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 1.7e-88 330.9 379 61.5
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 1.9e-87 327.4 377 57.8
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 2.5e-87 327.0 387 61.8
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 1.6e-86 324.3 380 60.8
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 1.6e-86 324.3 360 58.3
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 2.1e-86 323.9 382 57.6
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 4.7e-86 322.8 384 58.9
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 3.0e-85 320.1 323 65.0
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 8.8e-85 318.5 356 56.5
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 3.4e-84 316.6 312 64.7
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 7.5e-84 315.5 308 66.9
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 1.7e-83 314.3 378 58.7
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.2e-83 313.9 388 56.7
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 2.2e-83 313.9 377 52.3
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 2.8e-83 313.5 377 56.2
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 1.1e-82 311.6 307 64.8
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 1.4e-82 311.2 394 54.1
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 3.1e-82 310.1 272 71.0
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 5.4e-82 309.3 378 57.1
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 7.0e-82 308.9 309 64.4
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 9.1e-82 308.5 348 58.6
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 9.1e-82 308.5 286 62.6
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 9.1e-82 308.5 360 53.3
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 1.2e-81 308.1 311 64.3
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 6.5e-80 302.4 354 57.9
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 3.2e-79 300.1 292 65.1
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 3.2e-79 300.1 292 65.1
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 5.5e-79 299.3 316 62.7
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 2.1e-78 297.4 377 51.2
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 3.6e-78 296.6 315 61.3
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 3.6e-78 296.6 356 59.3
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 1.2e-76 291.6 377 53.6
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 2.8e-75 287.0 234 67.5
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 3.7e-75 286.6 359 52.4
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 2.3e-72 277.3 328 57.6
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 1.2e-70 271.6 360 49.7
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 1.2e-68 265.0 355 50.1
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 2.2e-67 260.8 183 75.4
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 1.9e-63 247.7 158 78.5
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 5.6e-55 219.5 133 80.5
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 1.5e-52 211.5 461 39.3
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.9e-50 204.5 304 45.7
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 1.5e-44 184.9 210 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 2.6e-44 184.1 352 43.8
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 6.4e-43 179.5 159 62.9
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 7.1e-42 176.0 238 49.6
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 1.6e-41 174.9 362 39.8
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 2.7e-41 174.1 237 49.4
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 8.6e-40 169.1 388 43.3
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 4.0e-37 160.2 145 58.6
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 2.5e-31 141.0 159 47.2
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 2.8e-30 137.5 268 42.2
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 1.1e-29 135.6 131 51.9
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 6.9e-29 132.9 183 47.5
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 9.9e-28 129.0 96 72.9
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 1.2e-25 122.1 145 46.2
CDE12G0011 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.3e-24 118.6 76 82.9
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 4.8e-22 110.2 202 50.0
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 6.2e-22 109.8 63 88.9
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 3.9e-16 90.5 177 35.0
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 5.1e-16 90.1 211 38.4
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 6.7e-16 89.7 120 47.5
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 4.3e-15 87.0 63 61.9
GSVIVG01002726001 Vitis vinifera HOM05D005363 ORTHO05D006607 3.7e-14 84.0 171 39.2
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 1.2e-12 79.0 181 34.3
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 2.0e-12 78.2 347 29.1
GSVIVG01001488001 Vitis vinifera HOM05D005363 ORTHO05D006607 2.6e-12 77.8 173 37.6
Sopen00g013530 Solanum pennellii HOM05D005363 ORTHO05D006607 1.3e-11 75.5 105 61.0
THA.LOC104811844 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.9e-10 71.6 196 46.9
GSVIVG01001483001 Vitis vinifera HOM05D005363 ORTHO05D006607 2.7e-09 67.8 90 50.0
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 1.6e-06 58.5 160 33.1


User provided reference genes

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