Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 0.0e+00 1269.2 686 100.0
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 1.9e-202 709.9 695 57.8
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 6.7e-200 701.4 697 57.1
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 4.2e-194 682.2 697 56.1
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 9.7e-191 671.0 695 56.4
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 6.9e-189 664.8 696 54.6
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 4.5e-188 662.1 684 54.8
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 4.2e-186 655.6 730 52.1
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 6.1e-185 651.7 740 52.2
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 7.9e-185 651.4 737 51.6
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 1.4e-184 650.6 716 52.8
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 9.7e-183 644.4 742 52.3
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 1.2e-180 637.5 697 53.8
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 7.9e-177 624.8 753 49.9
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 4.4e-175 619.0 704 50.9
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 5.7e-175 618.6 739 51.6
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 1.3e-174 617.5 742 49.9
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 3.7e-174 615.9 759 50.5
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 3.7e-174 615.9 740 51.5
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 1.1e-173 614.4 700 51.9
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 3.1e-173 612.8 695 51.2
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 9.1e-173 611.3 701 52.2
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 4.5e-172 609.0 748 49.3
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 4.5e-172 609.0 752 49.3
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 1.7e-171 607.1 751 49.5
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 2.2e-171 606.7 731 49.0
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 6.5e-171 605.1 747 50.1
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 7.2e-170 601.7 736 49.7
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 2.7e-169 599.7 696 51.4
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 6.1e-169 598.6 737 50.3
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 1.4e-168 597.4 736 49.5
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 1.5e-167 594.0 701 50.4
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 5.7e-167 592.0 740 48.4
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 1.3e-166 590.9 693 49.9
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 2.2e-166 590.1 765 47.3
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 2.8e-166 589.7 698 50.7
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 4.8e-166 589.0 755 48.2
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 6.3e-166 588.6 744 47.7
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 1.0e-163 581.3 701 49.8
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.3e-163 580.9 704 50.1
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 2.9e-163 579.7 740 48.1
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 6.5e-163 578.6 701 48.9
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 1.1e-162 577.8 695 48.3
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 1.1e-162 577.8 702 50.0
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 1.9e-162 577.0 746 47.3
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 3.2e-162 576.2 705 50.1
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 3.2e-162 576.2 747 47.7
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 2.7e-161 573.2 701 48.5
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 4.7e-161 572.4 701 48.5
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.4e-160 570.9 755 46.6
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 8.8e-160 568.2 662 50.0
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 2.6e-159 566.6 739 47.1
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 7.5e-159 565.1 695 47.8
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 2.8e-158 563.1 682 49.3
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 2.4e-157 560.1 763 45.7
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 5.4e-157 558.9 703 48.8
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 1.2e-156 557.8 738 45.4
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 5.9e-156 555.4 736 46.2
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 2.9e-155 553.1 763 46.5
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 3.8e-155 552.7 704 47.7
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 5.0e-155 552.4 742 45.6
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 1.1e-154 551.2 697 48.1
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 9.5e-154 548.1 697 47.3
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 1.2e-153 547.7 697 47.9
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 8.0e-153 545.0 700 47.1
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 1.4e-152 544.3 469 64.0
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 1.8e-152 543.9 762 45.4
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 2.3e-152 543.5 701 46.8
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 4.0e-152 542.7 762 45.3
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 5.2e-152 542.3 698 48.0
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 2.0e-151 540.4 728 46.7
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 1.8e-149 533.9 796 42.8
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 1.2e-145 521.2 712 44.5
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 2.1e-145 520.4 699 45.4
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.8e-144 517.3 758 43.5
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 2.3e-144 516.9 697 45.9
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 4.9e-142 509.2 702 46.6
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 1.0e-139 501.5 608 48.8
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 6.6e-139 498.8 711 44.3
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 8.0e-137 491.9 654 46.8
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 2.9e-134 483.4 740 41.8
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 1.2e-132 478.0 746 42.4
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.6e-132 477.6 734 43.2
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 4.6e-132 476.1 773 42.6
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 2.3e-131 473.8 741 40.6
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 3.6e-129 466.5 764 40.6
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 8.9e-128 461.8 748 40.9
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 7.5e-127 458.8 754 40.6
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 3.2e-125 453.4 738 42.0
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 2.1e-124 450.7 852 37.4
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 3.3e-122 443.4 695 40.4
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 2.2e-118 430.6 658 42.9
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 4.6e-116 422.9 710 39.3
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 3.9e-115 419.9 821 36.9
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 1.9e-114 417.5 831 39.1
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 7.3e-114 415.6 683 41.4
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 1.1e-112 411.8 835 36.2
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 1.2e-111 408.3 834 36.0
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 7.3e-106 389.0 699 40.1
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 1.6e-105 387.9 686 39.2
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 2.4e-101 374.0 825 38.1
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 7.9e-100 369.0 738 36.9
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 1.3e-99 368.2 541 45.8
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 1.3e-91 341.7 706 36.5
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 1.3e-89 335.1 703 36.4
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 1.0e-86 325.5 698 35.5
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.4e-80 305.1 694 35.0
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 3.0e-75 287.3 684 33.9
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 8.2e-73 279.3 407 43.7
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 2.5e-69 267.7 622 34.7
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 5.3e-64 250.0 718 29.2
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 5.5e-61 240.0 275 49.1
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 4.4e-58 230.3 889 27.4
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 7.0e-56 223.0 407 38.8
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 1.6e-55 221.9 686 28.1
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 1.1e-53 215.7 379 40.6
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 4.5e-47 193.7 698 27.1
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.2e-46 191.4 675 29.8
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 6.1e-44 183.3 176 51.7
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 6.1e-44 183.3 176 51.7
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 2.7e-39 167.9 180 50.6
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 1.2e-36 159.1 430 28.8
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 5.0e-30 137.1 125 54.4
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 1.1e-29 136.0 178 42.7
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 1.8e-27 128.6 239 37.2
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 2.3e-27 128.3 82 75.6
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 4.9e-25 120.6 111 52.3
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.1e-21 109.4 96 58.3
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 3.3e-21 107.8 134 42.5
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 2.2e-17 95.1 112 43.8
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.5e-13 81.6 99 42.4
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 2.1e-12 78.6 193 35.8
VMungo0251G1262 Vigna mungo HOM05D005824 ORTHO05D007029 2.9e-09 68.2 94 47.9


User provided reference genes

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