Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03987 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 3.0e-69 265.0 130 100.0
Aqoxy7G03988 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 5.4e-50 201.1 98 100.0
Aqoxy1G01668 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 1.3e-48 196.4 98 98.0
Aqoxy4G03157 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 3.3e-47 191.8 98 95.9
GSVIVG01000730001 Vitis vinifera HOM05D004774 ORTHO05D005514 5.0e-40 167.9 98 77.6
GSVIVG01011075001 Vitis vinifera HOM05D004774 ORTHO05D005514 7.3e-39 164.1 98 74.5
CSS0049587 Camellia sinensis var. sinensis HOM05D004774 ORTHO05D005514 3.6e-38 161.8 98 75.5
PSO170G5180 Papaver somniferum HOM05D004774 ORTHO05D005514 3.6e-38 161.8 98 77.6
Gohir.A07G209300 Gossypium hirsutum HOM05D004774 ORTHO05D005514 6.2e-38 161.0 98 75.5
PSO339G5528 Papaver somniferum HOM05D004774 ORTHO05D005514 6.2e-38 161.0 103 73.8
Thecc.01G266900 Theobroma cacao HOM05D004774 ORTHO05D005514 6.2e-38 161.0 106 72.6
Duzib138G0586 Durio zibethinus HOM05D004774 ORTHO05D005514 8.0e-38 160.6 97 77.3
Gohir.D07G215400 Gossypium hirsutum HOM05D004774 ORTHO05D005514 1.1e-37 160.2 98 74.5
Gorai.001G243200 Gossypium raimondii HOM05D004774 ORTHO05D005514 1.1e-37 160.2 98 74.5
Atru.chr5.1584 Acer truncatum HOM05D004774 ORTHO05D005514 3.1e-37 158.7 98 73.5
Dinv40162 Davidia involucrata HOM05D004774 ORTHO05D005514 5.2e-37 157.9 98 73.5
PSO017G6900 Papaver somniferum HOM05D004774 ORTHO05D005514 5.2e-37 157.9 98 77.6
Ciclev10023915m.g Citrus clementina HOM05D004774 ORTHO05D005514 6.8e-37 157.5 98 72.4
MSTRG.18290 Avicennia marina HOM05D004774 ORTHO05D005514 8.9e-37 157.1 98 71.4
vmacro02628 Vaccinium macrocarpon HOM05D004774 ORTHO05D005514 8.9e-37 157.1 98 77.6
Cc01_g18810 Coffea canephora HOM05D004774 ORTHO05D005514 2.6e-36 155.6 98 72.4
Nn4g23666 Nelumbo nucifera HOM05D004774 ORTHO05D005514 9.8e-36 153.7 97 73.2
Duzib211G0067 Durio zibethinus HOM05D004774 ORTHO05D005514 1.7e-35 152.9 98 72.4
QL08p045287 Quercus lobata HOM05D004774 ORTHO05D005514 1.7e-35 152.9 98 72.4
Migut.D00377 Erythranthe guttata HOM05D004774 ORTHO05D005514 2.2e-35 152.5 98 68.4
Nitab4.5_0003289g0060 Nicotiana tabacum HOM05D004774 ORTHO05D005514 2.2e-35 152.5 98 69.4
Cpa.g.sc52.135 Carica papaya HOM05D004774 ORTHO05D005514 4.9e-35 151.4 98 71.4
Rhsim13G0031100 Rhododendron simsii HOM05D004774 ORTHO05D005514 8.3e-35 150.6 98 74.5
TAR636G0805 Trochodendron aralioides HOM05D004774 ORTHO05D005514 8.3e-35 150.6 117 64.1
Dinv22475 Davidia involucrata HOM05D004774 ORTHO05D005514 1.1e-34 150.2 98 71.4
Nitab4.5_0001427g0080 Nicotiana tabacum HOM05D004774 ORTHO05D005514 1.1e-34 150.2 98 69.4
CAN.G1190.29 Capsicum annuum HOM05D004774 ORTHO05D005514 1.9e-34 149.4 98 68.4
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 2.4e-34 149.1 113 60.2
COL.COLO4_05101 Corchorus olitorius HOM05D004774 ORTHO05D005514 2.4e-34 149.1 98 67.3
THA.LOC104815831 Tarenaya hassleriana HOM05D004774 ORTHO05D005514 3.2e-34 148.7 98 65.3
TWI18G0081 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 3.2e-34 148.7 98 68.4
CiPaw.06G137100 Carya illinoinensis HOM05D004774 ORTHO05D005514 4.1e-34 148.3 98 68.4
SGA_v2.0_scaffold138G35272 Striga asiatica HOM05D004774 ORTHO05D005514 4.1e-34 148.3 104 65.4
TWI12G1255 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 7.0e-34 147.5 98 69.4
Manes.01G201400 Manihot esculenta HOM05D004774 ORTHO05D005514 9.2e-34 147.1 98 68.4
MD08G1227600 Malus domestica HOM05D004774 ORTHO05D005514 1.6e-33 146.4 98 69.4
Cfa005024 Carpinus fangiana HOM05D004774 ORTHO05D005514 2.1e-33 146.0 103 65.0
Eucgr.B01492 Eucalyptus grandis HOM05D004774 ORTHO05D005514 2.1e-33 146.0 98 69.4
AL1G16800 Arabidopsis lyrata HOM05D004774 ORTHO05D005514 3.5e-33 145.2 98 63.3
ClCG09G004860 Citrullus lanatus HOM05D004774 ORTHO05D005514 4.6e-33 144.8 98 66.3
Lj4A469T41 Lonicera japonica HOM05D004774 ORTHO05D005514 4.6e-33 144.8 105 66.7
SHI09938 Sapria himalayana HOM05D004774 ORTHO05D000023 4.6e-33 144.8 97 67.0
MELO3C023634.2 Cucumis melo HOM05D004774 ORTHO05D005514 6.0e-33 144.4 98 65.3
CsaV3_7G030220 Cucumis sativus L. HOM05D004774 ORTHO05D005514 6.0e-33 144.4 98 65.3
Solyc07g006240.4 Solanum lycopersicum HOM05D004774 ORTHO05D005514 6.0e-33 144.4 98 65.3
CANSAT35G0005 Cannabis sativa HOM05D004774 ORTHO05D005514 1.0e-32 143.7 98 66.3
AT1G06790 Arabidopsis thaliana HOM05D004774 ORTHO05D005514 1.3e-32 143.3 98 61.2
Sopen07g002340 Solanum pennellii HOM05D004774 ORTHO05D005514 1.3e-32 143.3 98 64.3
SGA_v2.0_scaffold43G16236 Striga asiatica HOM05D004774 ORTHO05D005514 2.3e-32 142.5 98 65.3
Thhalv10028967m.g Eutrema salsugineum HOM05D004774 ORTHO05D005514 3.0e-32 142.1 98 61.2
AUR62015525 Chenopodium quinoa HOM05D004774 ORTHO05D005514 3.9e-32 141.7 98 64.3
Prupe.2G103200 Prunus persica HOM05D004774 ORTHO05D005514 3.9e-32 141.7 98 67.3
Sabra02G0035700 Salix brachista HOM05D004774 ORTHO05D005514 3.9e-32 141.7 98 65.3
Potri.002G044500 Populus trichocarpa HOM05D004774 ORTHO05D005514 5.1e-32 141.4 97 66.0
Carub.0001s0611 Capsella rubella HOM05D004774 ORTHO05D005514 6.6e-32 141.0 98 61.2
Duzib211G0109 Durio zibethinus HOM05D004774 ORTHO05D005514 6.6e-32 141.0 98 68.4
Sed0022653 Sechium edule HOM05D004774 ORTHO05D005514 8.6e-32 140.6 98 66.3
CARHR006490 Cardamine hirsuta HOM05D004774 ORTHO05D005514 1.1e-31 140.2 100 63.0
EL10Ac3g05825 Beta vulgaris HOM05D004774 ORTHO05D005514 1.9e-31 139.4 98 59.2
AUR62002186 Chenopodium quinoa HOM05D004774 ORTHO05D005514 2.5e-31 139.0 98 62.2
Os07g0477000 Oryza sativa ssp. japonica HOM05D004774 ORTHO05D005514 2.5e-31 139.0 97 64.9
PGSC0003DMG400011166 Solanum tuberosum HOM05D004774 ORTHO05D005514 3.3e-31 138.7 105 61.9
ECA247G2354 Erigeron canadensis HOM05D002220 ORTHO05D008182 4.3e-31 138.3 98 64.3
Sc04g0000740 Simmondsia chinensis HOM05D004774 ORTHO05D005514 5.6e-31 137.9 98 63.3
MBI04_g06856_MAGBIO Magnolia biondii HOM05D004774 ORTHO05D005514 9.5e-31 137.1 98 64.3
VMungo0331G0358 Vigna mungo HOM05D002747 ORTHO05D005514 1.2e-30 136.7 106 65.1
TPR.G27929 Trifolium pratense HOM05D004774 ORTHO05D005514 1.6e-30 136.3 98 66.3
arahy.Tifrunner.gnm1.ann1.KW6T12 Arachis hypogaea HOM05D004774 ORTHO05D005514 2.8e-30 135.6 117 57.3
VMungo1309G2525 Vigna mungo HOM05D004774 ORTHO05D005514 2.8e-30 135.6 100 66.0
Lsat_1_v5_gn_5_176641 Lactuca sativa HOM05D004774 ORTHO05D005514 3.6e-30 135.2 98 62.2
FAN21G2916 Fragaria x ananassa HOM05D004774 ORTHO05D005514 4.7e-30 134.8 103 64.1
Ca_27275_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 6.2e-30 134.4 98 65.3
FAN19G2773 Fragaria x ananassa HOM05D004774 ORTHO05D005514 6.2e-30 134.4 103 62.1
Phvul.010G020150 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 6.2e-30 134.4 98 65.3
Phvul.010G020200 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 6.2e-30 134.4 98 65.3
Medtr8g072680 Medicago truncatula HOM05D004774 ORTHO05D005514 8.1e-30 134.0 98 65.3
Lalb_Chr17g0348441 Lupinus albus HOM05D004774 ORTHO05D005514 1.1e-29 133.7 98 60.2
FvH4_1g22880 Fragaria vesca HOM05D004774 ORTHO05D005514 1.8e-29 132.9 98 64.3
FAN26G2874 Fragaria x ananassa HOM05D004774 ORTHO05D005514 1.8e-29 132.9 98 64.3
Sp1g05530 Schrenkiella parvula HOM05D004774 ORTHO05D005514 4.0e-29 131.7 98 58.2
CDE07G1842 Ceratophyllum demersum HOM05D004774 ORTHO05D005514 5.2e-29 131.3 91 65.9
Glyma.19G215300 Glycine max HOM05D004774 ORTHO05D005514 5.2e-29 131.3 98 65.3
Ca_26554_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 6.8e-29 131.0 98 64.3
Psat3g097920 Pisum sativum HOM05D004774 ORTHO05D005514 8.9e-29 130.6 98 65.3
Zm00001eb319960 Zea mays HOM05D004774 ORTHO05D005514 1.2e-28 130.2 98 63.3
Glyma.03G218500 Glycine max HOM05D004774 ORTHO05D005514 1.5e-28 129.8 98 64.3
Hma1.2p1_1029F.1_g249620 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 1.5e-28 129.8 102 63.7
Hma1.2p1_1029F.1_g249641 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 1.5e-28 129.8 102 63.7
SEGI_34955 Sequoiadendron giganteum HOM05D004774 ORTHO05D005514 1.5e-28 129.8 99 58.6
FAN23G2064 Fragaria x ananassa HOM05D004774 ORTHO05D005514 2.0e-28 129.4 98 63.3
Lj4g0014477 Lotus japonicus HOM05D004774 ORTHO05D005514 2.0e-28 129.4 98 63.3
DCAR_002682 Daucus carota HOM05D004774 ORTHO05D005514 2.6e-28 129.0 88 65.9
HPP92_015388 Vanilla planifolia HOM05D004774 ORTHO05D005514 2.6e-28 129.0 98 62.2
HPP92_027004 Vanilla planifolia HOM05D004774 ORTHO05D005514 2.6e-28 129.0 98 62.2
GSVIVG01021945001 Vitis vinifera HOM05D004774 ORTHO05D005514 3.4e-28 128.6 98 61.2
RcHm_v2.0_Chr5g0063451 Rosa chinensis HOM05D004774 ORTHO05D005514 4.4e-28 128.3 98 63.3
ATR0665G644 Amborella trichopoda HOM05D004774 ORTHO05D005514 1.7e-27 126.3 98 59.2
BraA08t35495Z Brassica rapa HOM05D004774 ORTHO05D005514 1.9e-26 122.9 98 54.1
Mapoly0050s0102 Marchantia polymorpha HOM05D004774 ORTHO05D005514 4.1e-26 121.7 103 49.5
SMO012G0037 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 5.4e-26 121.3 97 58.8
SMO298G0040 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 5.4e-26 121.3 97 58.8
A08p35880 Brassica napus HOM05D004774 ORTHO05D005514 9.2e-26 120.6 98 55.1
C08p02690 Brassica napus HOM05D004774 ORTHO05D005514 9.2e-26 120.6 98 55.1
BolC8t47065H Brassica oleracea HOM05D004774 ORTHO05D005514 9.2e-26 120.6 98 55.1
BcaC07g42048 Brassica carinata HOM05D004774 ORTHO05D005514 2.7e-25 119.0 98 55.1
unitig_0.g1128 Utricularia gibba HOM05D004774 ORTHO05D005514 3.5e-25 118.6 125 44.8
BolC8t52628H Brassica oleracea HOM05D004774 ORTHO05D005514 1.7e-24 116.3 98 53.1
BcaC07g42538 Brassica carinata HOM05D004774 ORTHO05D005514 2.3e-24 115.9 98 52.0
A09p66780 Brassica napus HOM05D004774 ORTHO05D005514 2.3e-24 115.9 98 52.0
Pp3c7_17850 Physcomitrium patens HOM05D004774 ORTHO05D005514 6.6e-24 114.4 97 52.6
C08p51000 Brassica napus HOM05D004774 ORTHO05D005514 1.9e-23 112.8 104 50.0
GSVIVG01000731001 Vitis vinifera HOM05D004774 ORTHO05D005514 7.3e-23 110.9 75 72.0
Haze_02362 Corylus avellana HOM05D004774 ORTHO05D005514 9.5e-23 110.5 74 67.6
GSVIVG01021951001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.7e-22 108.2 101 53.5
AagrBONN_evm.TU.Sc2ySwM_344.4376 Anthoceros agrestis HOM05D004774 ORTHO05D005514 3.1e-21 105.5 105 45.7
BraA09t42016Z Brassica rapa HOM05D004774 ORTHO05D005514 5.2e-21 104.8 127 40.2
Cre12.g538400 Chlamydomonas reinhardtii HOM05D004774 ORTHO05D005514 5.2e-21 104.8 98 48.0
TPR.G27610 Trifolium pratense HOM05D004774 ORTHO05D005514 2.9e-19 99.0 68 69.1
MCO09G483 Micromonas commoda HOM05D004774 ORTHO05D005514 1.9e-18 96.3 98 42.9
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 3.2e-18 95.5 68 60.3
Peaxi162Scf00934g00135 Petunia axillaris HOM05D004774 ORTHO05D005514 2.7e-17 92.4 98 50.0
TPR.G26057 Trifolium pratense HOM05D004774 ORTHO05D005514 5.6e-15 84.7 57 64.9
FAN11G3419 Fragaria x ananassa HOM05D004774 ORTHO05D005514 1.7e-11 73.2 58 60.3
BolC8t46832H Brassica oleracea HOM05D004774 ORTHO05D005514 1.9e-10 69.7 48 52.1
CDE07G0321 Ceratophyllum demersum HOM05D004774 ORTHO05D005514 3.2e-10 68.9 97 40.2
FAN28G1675 Fragaria x ananassa HOM05D004774 ORTHO05D005514 3.0e-08 62.4 60 51.7
BolC1t02432H Brassica oleracea HOM05D004774 ORTHO05D033846 5.1e-08 61.6 41 56.1
Lalb_Chr23g0275811 Lupinus albus HOM05D004774 ORTHO05D005514 5.1e-08 61.6 112 37.5
C08p41270 Brassica napus HOM05D004774 ORTHO05D005514 6.6e-08 61.2 41 56.1
GSVIVG01001488001 Vitis vinifera HOM05D005363 ORTHO05D006607 4.3e-07 58.5 52 55.8
Haze_27325 Corylus avellana HOM05D004044 ORTHO05D004841 2.1e-06 56.2 97 28.9
GSVIVG01002726001 Vitis vinifera HOM05D005363 ORTHO05D006607 4.8e-06 55.1 52 53.8
Lj6g0006771 Lotus japonicus HOM05D004044 ORTHO05D004841 8.1e-06 54.3 89 32.6


User provided reference genes

Program Settings